RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	FLRT1	Q9NZU1	646 aa		13.86	□□□□□ -0.19
TUBA1B-208	ENST00000552984	SLC4A4	Q9Y6R1	1079 aa		13.86	□□□□□ -0.19
TUBA1B-208	ENST00000552984	SMCHD1	A6NHR9	2005 aa		13.86	□□□□□ -0.19
TUBA1B-208	ENST00000552984	LAMA3	Q16787	3333 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	XRCC5	P13010	732 aa	Known RBP	13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	RGS2	P41220	211 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	CDK8	P49336	464 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	ICA1	Q05084	483 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	UBE3C	Q15386	1083 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	C12orf60	Q5U649	245 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	TMEM179	Q6ZVK1	233 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	STK11IP	Q8N1F8	1099 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	ATP8A2	Q9NTI2	1148 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	ECHDC1	Q9NTX5	307 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	MCM3AP	O60318	1980 aa		13.85	□□□□□ -0.19
TUBA1B-208	ENST00000552984	DNAH12	Q6ZR08	3092 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	EVI5	O60447	810 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	MAP2K5	Q13163	448 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	CTR9	Q6PD62	1173 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	LBX2	Q6XYB7	198 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	NECAB2	Q7Z6G3	386 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	C7orf61	Q8IZ16	206 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	NPLOC4	Q8TAT6	608 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	DCTPP1	Q9H773	170 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	SWAP70	Q9UH65	585 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	PCDHB15	Q9Y5E8	787 aa		13.84	□□□□□ -0.19
TUBA1B-208	ENST00000552984	PTPRE	P23469	700 aa		13.83	□□□□□ -0.2
TUBA1B-208	ENST00000552984	CCNA1	P78396	465 aa		13.83	□□□□□ -0.2
TUBA1B-208	ENST00000552984	C16orf86	Q6ZW13	317 aa		13.83	□□□□□ -0.2
TUBA1B-208	ENST00000552984	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.83	□□□□□ -0.2
TUBA1B-208	ENST00000552984	PRO3102	Q9H379	93 aa		13.83	□□□□□ -0.2
TUBA1B-208	ENST00000552984	OGDHL	Q9ULD0	1010 aa		13.83	□□□□□ -0.2
TUBA1B-208	ENST00000552984	PFAS	O15067	1338 aa		13.83	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ATP2B2	Q01814	1243 aa		13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	GRB14	Q14449	540 aa		13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ANKLE1	Q8NAG6	615 aa		13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	OSBP2	Q969R2	916 aa		13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ATG4C	Q96DT6	458 aa		13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	STRBP	Q96SI9	672 aa	Known RBP	13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	VCPKMT	Q9H867	229 aa		13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	NR2E3	Q9Y5X4	410 aa		13.82	□□□□□ -0.2
TUBA1B-208	ENST00000552984	LTBP2	Q14767	1821 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	SLC15A5	A6NIM6	579 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984		M0R2C6	588 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	FLOT1	O75955	427 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	EEF2	P13639	858 aa	Known RBP	13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	CYP2C19	P33261	490 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	COG2	Q14746	738 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	LHX8	Q68G74	356 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ZSCAN25	Q6NSZ9	544 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	AMOTL1	Q8IY63	956 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	KBTBD3	Q8NAB2	608 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	NBPF3	Q9H094	633 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	SPATC1L	Q9H0A9	340 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	C11orf49	Q9H6J7	331 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ARHGEF10L	Q9HCE6	1279 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	FBXO28	Q9NVF7	368 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	STAP2	Q9UGK3	403 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	TMX2	Q9Y320	296 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	IVNS1ABP	Q9Y6Y0	642 aa		13.81	□□□□□ -0.2
TUBA1B-208	ENST00000552984	GSG1L2	A8MUP6	293 aa		13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	RAD21	O60216	631 aa		13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	GLRX3	O76003	335 aa	Known RBP	13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	SYN1	P17600	705 aa		13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ERCC3	P19447	782 aa		13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	DSG3	P32926	999 aa		13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	PLS1	Q14651	629 aa		13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	TRMT44	Q8IYL2	757 aa	Known RBP	13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	TRPV1	Q8NER1	839 aa		13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	APPBP2	Q92624	585 aa		13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	DDRGK1	Q96HY6	314 aa		13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	SEC62	Q99442	399 aa	Known RBP	13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.8	□□□□□ -0.2
TUBA1B-208	ENST00000552984	MINDY4B	A8MYZ0	360 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	RNF113A	O15541	343 aa	Known RBP	13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	GPAA1	O43292	621 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	COBL	O75128	1261 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	RASA1	P20936	1047 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ADORA2A	P29274	412 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	PI4K2B	Q8TCG2	481 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	LPAR1	Q92633	364 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	GPATCH3	Q96I76	525 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	CCDC17	Q96LX7	622 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	NUP88	Q99567	741 aa	Predicted RBP	13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	ROBO3	Q96MS0	1386 aa		13.79	□□□□□ -0.2
TUBA1B-208	ENST00000552984	SOX1	O00570	391 aa	Predicted RBP	13.78	□□□□□ -0.2
TUBA1B-208	ENST00000552984	WDR46	O15213	610 aa	Known RBP	13.78	□□□□□ -0.2
TUBA1B-208	ENST00000552984	PRDM1	O75626	825 aa		13.78	□□□□□ -0.2
TUBA1B-208	ENST00000552984	HOXC6	P09630	235 aa		13.78	□□□□□ -0.2
TUBA1B-208	ENST00000552984	COL6A1	P12109	1028 aa		13.78	□□□□□ -0.2
TUBA1B-208	ENST00000552984	CNGA1	P29973	690 aa		13.78	□□□□□ -0.2
TUBA1B-208	ENST00000552984	RRP1	P56182	461 aa	Known RBP	13.78	□□□□□ -0.2
TUBA1B-208	ENST00000552984	TMEM132B	Q14DG7	1078 aa		13.78	□□□□□ -0.2
TUBA1B-208	ENST00000552984	FAM83B	Q5T0W9	1011 aa		13.78	□□□□□ -0.2
TUBA1B-208	ENST00000552984	MFSD14C	Q5VZR4	134 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms