RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 SYNGAP1Q96PV0 1343 aa13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 COBLO75128 1261 aa13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 VCAM1P19320 739 aa13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 ADORA2AP29274 412 aa13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 MCAMP43121 646 aa13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 PRAMEF19Q5SWL8 479 aa13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 DPP9Q86TI2 863 aa13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 CRACR2BQ8N4Y2 399 aaPredicted RBP13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 MOV10L1Q9BXT6 1211 aaKnown RBP13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 AATFQ9NY61 560 aaKnown RBP eCLIP13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 ARIH1Q9Y4X5 557 aaPredicted RBP13.99□□□□□ -0.17
SUPT16H-202ENST00000552829 BAG3O95817 575 aa13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 USP14P54578 494 aa13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 MRPS5P82675 430 aaKnown RBP13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 FPGSQ05932 587 aa13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 ZYXQ15942 572 aaKnown RBP13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 FAM47AQ5JRC9 791 aa13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 RASIP1Q5U651 963 aa13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 ADGRA1Q86SQ6 560 aa13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 SHCBP1Q8NEM2 672 aa13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 ACER1Q8TDN7 264 aa13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 UHRF1Q96T88 793 aaPredicted RBP13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 A0A0G2JMZ2 1700 aa13.98□□□□□ -0.17
SUPT16H-202ENST00000552829 RAG1P15918 1043 aa13.97□□□□□ -0.17
SUPT16H-202ENST00000552829 ADGRE1Q14246 886 aa13.97□□□□□ -0.17
SUPT16H-202ENST00000552829 NAA16Q6N069 864 aaPredicted RBP13.97□□□□□ -0.17
SUPT16H-202ENST00000552829 ANKRD33Q7Z3H0 272 aa13.97□□□□□ -0.17
SUPT16H-202ENST00000552829 TOX2Q96NM4 488 aa13.97□□□□□ -0.17
SUPT16H-202ENST00000552829 NOL10Q9BSC4 688 aaKnown RBP13.97□□□□□ -0.17
SUPT16H-202ENST00000552829 TRIM34Q9BYJ4 488 aa13.97□□□□□ -0.17
SUPT16H-202ENST00000552829 LRP2BPQ9P2M1 347 aa13.97□□□□□ -0.17
SUPT16H-202ENST00000552829 TRANK1O15050 2925 aa13.97□□□□□ -0.17
SUPT16H-202ENST00000552829 FAAP100Q0VG06 881 aa13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 MTX1Q13505 466 aa13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 C16orf59Q7L2K0 433 aa13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 ABRAQ8N0Z2 381 aa13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 BBXQ8WY36 941 aaPredicted RBP13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 NEUROD6Q96NK8 337 aa13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 GAS2L1Q99501 681 aaPredicted RBP13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 FEZ1Q99689 392 aa13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.96□□□□□ -0.172e-15■□□□□ 10.9
SUPT16H-202ENST00000552829 RPAP3Q9H6T3 665 aaPredicted RBP13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 SAP30BPQ9UHR5 308 aaKnown RBP13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 NRBP1Q9UHY1 535 aa13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 HDAC5Q9UQL6 1122 aa13.96□□□□□ -0.17
SUPT16H-202ENST00000552829 UQCRFS1P1P0C7P4 283 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 ERCC3P19447 782 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 PBX2P40425 430 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 ALDH1L2Q3SY69 923 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 TMEM240Q5SV17 173 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 ATF7IPQ6VMQ6 1270 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 PPM1EQ8WY54 764 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 MAML3Q96JK9 1138 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 PBX4Q9BYU1 374 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 SPATC1LQ9H0A9 340 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 EHD4Q9H223 541 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 PRDM12Q9H4Q4 367 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 TMEM39AQ9NV64 488 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 TBX21Q9UL17 535 aa13.95□□□□□ -0.18
SUPT16H-202ENST00000552829 PARP14Q460N5 1801 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 MUC6Q6W4X9 2439 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 A0A1W2PQ45 241 aaPredicted RBP13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 A0A1W2PQY0 241 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 IGSF3O75054 1194 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 TIMP1P01033 207 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 HLA-DOAP06340 250 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 BMP1P13497 986 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 COG2Q14746 738 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 SLC44A5Q8NCS7 719 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 GBF1Q92538 1859 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 MEIS3Q99687 375 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 C1QTNF1Q9BXJ1 281 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 XPNPEP3Q9NQH7 507 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 HOXC10Q9NYD6 342 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 ROBO3Q96MS0 1386 aa13.94□□□□□ -0.18
SUPT16H-202ENST00000552829 GRXCR1A8MXD5 290 aa13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 PQBP1O60828 265 aaKnown RBP13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 RAB3GAP1Q15042 981 aa13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 GORABQ5T7V8 394 aa13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 MFSD5Q6N075 450 aa13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 RNF180Q86T96 592 aa13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 TSEN34Q9BSV6 310 aaKnown RBP13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 MROH8Q9H579 483 aa13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 SLC5A4Q9NY91 659 aa13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 SERPINB13Q9UIV8 391 aa13.93□□□□□ -0.18
SUPT16H-202ENST00000552829 SRGAP3O43295 1099 aa13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 ABCB7O75027 752 aa13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 ADAMTS4O75173 837 aa13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 PGK1P00558 417 aa13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 CYP2E1P05181 493 aaPredicted RBP13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 RARBP10826 455 aa13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 SHMT1P34896 483 aa13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 DYNLL1P63167 89 aaKnown RBP13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 ABCB5Q2M3G0 1257 aa13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 CERKLQ49MI3 558 aaPredicted RBP13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 FAM9BQ8IZU0 186 aa13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 NECAB3Q96P71 396 aaPredicted RBP13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 SNRKQ9NRH2 765 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms