RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 RPAP3Q9H6T3 665 aaPredicted RBP16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
SMARCC2-212ENST00000552566 CNMDO75829 334 aa16.62■□□□□ 0.25
SMARCC2-212ENST00000552566 XRCC5P13010 732 aaKnown RBP16.62■□□□□ 0.25
SMARCC2-212ENST00000552566 GSPT1P15170 499 aaKnown RBP16.62■□□□□ 0.25
SMARCC2-212ENST00000552566 ADD2P35612 726 aa16.62■□□□□ 0.25
SMARCC2-212ENST00000552566 GABPAQ06546 454 aa16.62■□□□□ 0.25
SMARCC2-212ENST00000552566 TICAM2Q86XR7 235 aa16.62■□□□□ 0.25
SMARCC2-212ENST00000552566 CHGBP05060 677 aa16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 CACNB2Q08289 660 aaPredicted RBP16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 MORN1Q5T089 497 aa16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 TRMT44Q8IYL2 757 aaKnown RBP16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 KBTBD3Q8NAB2 608 aa16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 ANKLE1Q8NAG6 615 aa16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 USP6NLQ92738 828 aa16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 APBA2Q99767 749 aa16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 SIPA1L1O43166 1804 aa16.61■□□□□ 0.25
SMARCC2-212ENST00000552566 A0A1W2PRG0 241 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 CDC45O75419 566 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 MAP3K21Q5TCX8 1036 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 AMOTL1Q8IY63 956 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 C7orf61Q8IZ16 206 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 C11orf49Q9H6J7 331 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 DIAPH3Q9NSV4 1193 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 BTBD7Q9P203 1132 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 SWAP70Q9UH65 585 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 IVNS1ABPQ9Y6Y0 642 aa16.6■□□□□ 0.25
SMARCC2-212ENST00000552566 CYP2D7A0A087X1C5 515 aa16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 SPDYE16A6NNV3 312 aaPredicted RBP16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 ZFYP08048 801 aaPredicted RBP16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 MAP2K5Q13163 448 aa16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 TMEM179Q6ZVK1 233 aa16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 CLEC10AQ8IUN9 316 aa16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 RUFY2Q8WXA3 655 aa16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 ATP8A2Q9NTI2 1148 aa16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 OGDHLQ9ULD0 1010 aa16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 SLC4A4Q9Y6R1 1079 aa16.59■□□□□ 0.25
SMARCC2-212ENST00000552566 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 USP17L12C9JPN9 530 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 USP17L21D6R901 530 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 AKR1B1P15121 316 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 PTPREP23469 700 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 CCND3P30281 292 aaPredicted RBP16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 ATP2B2Q01814 1243 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 COG2Q14746 738 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 MFSD14CQ5VZR4 134 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 SPICE1Q8N0Z3 855 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 HOXC10Q9NYD6 342 aa16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 ZMYND8Q9ULU4 1186 aaPredicted RBP16.58■□□□□ 0.24
SMARCC2-212ENST00000552566 PTPRFP10586 1907 aa16.57■□□□□ 0.24
SMARCC2-212ENST00000552566 SMIM22K7EJ46 135 aa16.57■□□□□ 0.24
SMARCC2-212ENST00000552566 MNX1P50219 401 aaPredicted RBP16.57■□□□□ 0.24
SMARCC2-212ENST00000552566 ICA1Q05084 483 aa16.57■□□□□ 0.24
SMARCC2-212ENST00000552566 UBE3CQ15386 1083 aa16.57■□□□□ 0.24
SMARCC2-212ENST00000552566 C12orf60Q5U649 245 aa16.57■□□□□ 0.24
SMARCC2-212ENST00000552566 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
SMARCC2-212ENST00000552566 ARHGEF10LQ9HCE6 1279 aa16.57■□□□□ 0.24
SMARCC2-212ENST00000552566 RNF113AO15541 343 aaKnown RBP16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 RAD21O60216 631 aa16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 CNGA1P29973 690 aa16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 CDK8P49336 464 aa16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 PLS1Q14651 629 aa16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 KIAA1755Q5JYT7 1200 aa16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 MOV10L1Q9BXT6 1211 aaKnown RBP16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 PUS7LQ9H0K6 701 aaKnown RBP16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 SH2D4AQ9H788 454 aa16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 FLRT1Q9NZU1 646 aa16.56■□□□□ 0.24
SMARCC2-212ENST00000552566 ATAD5Q96QE3 1844 aa16.55■□□□□ 0.24
SMARCC2-212ENST00000552566 FLOT1O75955 427 aa16.55■□□□□ 0.24
SMARCC2-212ENST00000552566 SYN1P17600 705 aa16.55■□□□□ 0.24
SMARCC2-212ENST00000552566 DPP9Q86TI2 863 aa16.55■□□□□ 0.24
SMARCC2-212ENST00000552566 SIAH1Q8IUQ4 282 aa16.55■□□□□ 0.24
SMARCC2-212ENST00000552566 STK11IPQ8N1F8 1099 aa16.55■□□□□ 0.24
SMARCC2-212ENST00000552566 CCDC17Q96LX7 622 aa16.55■□□□□ 0.24
SMARCC2-212ENST00000552566 PRO3102Q9H379 93 aa16.55■□□□□ 0.24
SMARCC2-212ENST00000552566 CHMLP26374 656 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 CYP2C19P33261 490 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 MFAP1P55081 439 aaKnown RBP16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 GRB14Q14449 540 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 LHX8Q68G74 356 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 CTR9Q6PD62 1173 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 NPLOC4Q8TAT6 608 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 LPAR1Q92633 364 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 SPATC1LQ9H0A9 340 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 VCPKMTQ9H867 229 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 TMX2Q9Y320 296 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 MGAMO43451 1857 aa16.54■□□□□ 0.24
SMARCC2-212ENST00000552566 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
SMARCC2-212ENST00000552566 ERCC3P19447 782 aa16.53■□□□□ 0.24
SMARCC2-212ENST00000552566 DSG3P32926 999 aa16.53■□□□□ 0.24
SMARCC2-212ENST00000552566 CWC27Q6UX04 472 aaKnown RBP16.53■□□□□ 0.24
SMARCC2-212ENST00000552566 KIAA1211Q6ZU35 1233 aa16.53■□□□□ 0.24
SMARCC2-212ENST00000552566 NCAPG2Q86XI2 1143 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms