RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
TMEM116-215ENST00000552374 PORCNQ9H237 461 aa13.03□□□□□ -0.32
TMEM116-215ENST00000552374 SH2D4AQ9H788 454 aa13.03□□□□□ -0.32
TMEM116-215ENST00000552374 ZNF287Q9HBT7 754 aa13.03□□□□□ -0.32
TMEM116-215ENST00000552374 CDK5RAP2Q96SN8 1893 aa13.03□□□□□ -0.32
TMEM116-215ENST00000552374 FOCADQ5VW36 1801 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 CNMDO75829 334 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 CYP2B6P20813 491 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 MAPK4P31152 587 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 CCNA1P78396 465 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 PXYLP1Q8TE99 480 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 FAM227BQ96M60 508 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 NUDT12Q9BQG2 462 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 VCPKMTQ9H867 229 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 BTBD7Q9P203 1132 aa13.02□□□□□ -0.33
TMEM116-215ENST00000552374 SPDYE16A6NNV3 312 aaPredicted RBP13.01□□□□□ -0.33
TMEM116-215ENST00000552374 FLOT1O75955 427 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 INHAP05111 366 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 SLC3A2P08195 630 aaKnown RBP13.01□□□□□ -0.33
TMEM116-215ENST00000552374 PPARAQ07869 468 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 VPS53Q5VIR6 699 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 GPR142Q7Z601 462 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 PLEKHH3Q7Z736 793 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 LPAR1Q92633 364 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
TMEM116-215ENST00000552374 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 GOPCQ9HD26 462 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 HELLSQ9NRZ9 838 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 CLIP2Q9UDT6 1046 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 ZSWIM8A7E2V4 1837 aa13.01□□□□□ -0.33
TMEM116-215ENST00000552374 PDE4BQ07343 736 aa13□□□□□ -0.33
TMEM116-215ENST00000552374 PLS1Q14651 629 aa13□□□□□ -0.33
TMEM116-215ENST00000552374 MCMDC2Q4G0Z9 681 aa13□□□□□ -0.33
TMEM116-215ENST00000552374 INCENPQ9NQS7 918 aa13□□□□□ -0.33
TMEM116-215ENST00000552374 PTPRFP10586 1907 aa13□□□□□ -0.33
TMEM116-215ENST00000552374 ATAD5Q96QE3 1844 aa13□□□□□ -0.33
TMEM116-215ENST00000552374 WDR46O15213 610 aaKnown RBP12.99□□□□□ -0.33
TMEM116-215ENST00000552374 GJB1P08034 283 aa12.99□□□□□ -0.33
TMEM116-215ENST00000552374 TSPY3P0CV98 308 aa12.99□□□□□ -0.33
TMEM116-215ENST00000552374 TSPY8P0CW00 308 aa12.99□□□□□ -0.33
TMEM116-215ENST00000552374 DSG3P32926 999 aa12.99□□□□□ -0.33
TMEM116-215ENST00000552374 NMIQ13287 307 aaPredicted RBP12.99□□□□□ -0.33
TMEM116-215ENST00000552374 FAM47AQ5JRC9 791 aa12.99□□□□□ -0.33
TMEM116-215ENST00000552374 LBX2Q6XYB7 198 aa12.99□□□□□ -0.33
TMEM116-215ENST00000552374 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
TMEM116-215ENST00000552374 NAV1Q8NEY1 1877 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 A0A0D9SFI3 127 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 TFRCP02786 760 aaKnown RBP12.98□□□□□ -0.33
TMEM116-215ENST00000552374 HMGCRP04035 888 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 SDSP20132 328 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 GJA8P48165 433 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 TFAP4Q01664 338 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 TRIM32Q13049 653 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 U2AF1L4Q8WU68 220 aaKnown RBP12.98□□□□□ -0.33
TMEM116-215ENST00000552374 SOCS4Q8WXH5 440 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 ATG4CQ96DT6 458 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 OSBPL3Q9H4L5 887 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 NYAP2Q9P242 653 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 IVNS1ABPQ9Y6Y0 642 aa12.98□□□□□ -0.33
TMEM116-215ENST00000552374 F5H6K3 240 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 FOXP2O15409 715 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 SGPL1O95470 568 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 FGAP02671 866 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 PTPREP23469 700 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 RGS2P41220 211 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 KLRC3Q07444 240 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 MORN1Q5T089 497 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 FAM83BQ5T0W9 1011 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 MB21D1Q8N884 522 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 CEP95Q96GE4 821 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 NUP88Q99567 741 aaPredicted RBP12.97□□□□□ -0.33
TMEM116-215ENST00000552374 MOV10L1Q9BXT6 1211 aaKnown RBP12.97□□□□□ -0.33
TMEM116-215ENST00000552374 SPATC1LQ9H0A9 340 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 FBXO28Q9NVF7 368 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 MTMR4Q9NYA4 1195 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 LOC285556D6RIA3 1793 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 ROBO3Q96MS0 1386 aa12.97□□□□□ -0.33
TMEM116-215ENST00000552374 BAZ2AQ9UIF9 1905 aaKnown RBP12.97□□□□□ -0.33
TMEM116-215ENST00000552374 RANBP6O60518 1105 aaKnown RBP12.96□□□□□ -0.33
TMEM116-215ENST00000552374 TTLL1O95922 423 aa12.96□□□□□ -0.33
TMEM116-215ENST00000552374 XRCC5P13010 732 aaKnown RBP12.96□□□□□ -0.33
TMEM116-215ENST00000552374 CCL14Q16627 93 aa12.96□□□□□ -0.33
TMEM116-215ENST00000552374 ZNF589Q86UQ0 364 aaPredicted RBP12.96□□□□□ -0.33
TMEM116-215ENST00000552374 NCAPG2Q86XI2 1143 aa12.96□□□□□ -0.33
TMEM116-215ENST00000552374 TICAM2Q86XR7 235 aa12.96□□□□□ -0.33
TMEM116-215ENST00000552374 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.33
TMEM116-215ENST00000552374 TRIB2Q92519 343 aa12.96□□□□□ -0.33
TMEM116-215ENST00000552374 USP6NLQ92738 828 aa12.96□□□□□ -0.33
TMEM116-215ENST00000552374 CHMP4CQ96CF2 233 aa12.96□□□□□ -0.33
TMEM116-215ENST00000552374 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
TMEM116-215ENST00000552374 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
TMEM116-215ENST00000552374 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.33
TMEM116-215ENST00000552374 RPTORQ8N122 1335 aa12.96□□□□□ -0.34
TMEM116-215ENST00000552374 TNRC18O15417 2968 aaPredicted RBP12.96□□□□□ -0.34
TMEM116-215ENST00000552374 IGKV6D-41A0A0C4DH26 115 aa12.96□□□□□ -0.34
TMEM116-215ENST00000552374 SLC15A5A6NIM6 579 aa12.96□□□□□ -0.34
TMEM116-215ENST00000552374 TSPY2A6NKD2 308 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms