RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 RABGAP1Q9Y3P9 1069 aa16.07■□□□□ 0.16
CR383656.13-201ENST00000550928 KIAA0100Q14667 2235 aaKnown RBP16.06■□□□□ 0.16
CR383656.13-201ENST00000550928 EEF2P13639 858 aaKnown RBP16.06■□□□□ 0.16
CR383656.13-201ENST00000550928 UBXN2AP68543 259 aa16.06■□□□□ 0.16
CR383656.13-201ENST00000550928 ICA1Q05084 483 aa16.06■□□□□ 0.16
CR383656.13-201ENST00000550928 COG2Q14746 738 aa16.06■□□□□ 0.16
CR383656.13-201ENST00000550928 CLEC10AQ8IUN9 316 aa16.06■□□□□ 0.16
CR383656.13-201ENST00000550928 PAGR1Q9BTK6 254 aa16.06■□□□□ 0.16
CR383656.13-201ENST00000550928 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.06■□□□□ 0.16
CR383656.13-201ENST00000550928 HELLSQ9NRZ9 838 aa16.06■□□□□ 0.16
CR383656.13-201ENST00000550928 CNMDO75829 334 aa16.05■□□□□ 0.16
CR383656.13-201ENST00000550928 MAPK4P31152 587 aa16.05■□□□□ 0.16
CR383656.13-201ENST00000550928 CCDC129Q6ZRS4 1044 aa16.05■□□□□ 0.16
CR383656.13-201ENST00000550928 ZNF444Q8N0Y2 327 aaPredicted RBP16.05■□□□□ 0.16
CR383656.13-201ENST00000550928 LPAR1Q92633 364 aa16.05■□□□□ 0.16
CR383656.13-201ENST00000550928 NAPBQ9H115 298 aa16.05■□□□□ 0.16
CR383656.13-201ENST00000550928 SH2D4AQ9H788 454 aa16.05■□□□□ 0.16
CR383656.13-201ENST00000550928 VCPKMTQ9H867 229 aa16.05■□□□□ 0.16
CR383656.13-201ENST00000550928 ZNF287Q9HBT7 754 aa16.05■□□□□ 0.16
CR383656.13-201ENST00000550928 ROBO3Q96MS0 1386 aa16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 SPDYE16A6NNV3 312 aaPredicted RBP16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 TRIM6-TRIM34B2RNG4 842 aa16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 CCL5P13501 91 aa16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 ELNP15502 786 aa16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 IRX6P78412 446 aaPredicted RBP16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 ATP2B2Q01814 1243 aa16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 RILPL2Q969X0 211 aa16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 PORCNQ9H237 461 aa16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 BTBD7Q9P203 1132 aa16.04■□□□□ 0.16
CR383656.13-201ENST00000550928 RBBP6Q7Z6E9 1792 aaKnown RBP16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 FOXP2O15409 715 aa16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 DSG3P32926 999 aa16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 CCNA1P78396 465 aa16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 MCMDC2Q4G0Z9 681 aa16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 CCAR1Q8IX12 1150 aaKnown RBP16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 SPICE1Q8N0Z3 855 aa16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 FAM227BQ96M60 508 aa16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 NUDT12Q9BQG2 462 aa16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 RNF208Q9H0X6 261 aa16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 NYAP2Q9P242 653 aa16.03■□□□□ 0.16
CR383656.13-201ENST00000550928 TNRC18O15417 2968 aaPredicted RBP16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 PRDM1O75626 825 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 GJB1P08034 283 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 SLC3A2P08195 630 aaKnown RBP16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 PDE4BQ07343 736 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 PPARAQ07869 468 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 ALX1Q15699 326 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 VPS53Q5VIR6 699 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 GPR142Q7Z601 462 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 PLEKHH3Q7Z736 793 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 NKX2-3Q8TAU0 364 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 USP6NLQ92738 828 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 TANGO6Q9C0B7 1094 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 UNC93B1Q9H1C4 597 aa16.02■□□□□ 0.16
CR383656.13-201ENST00000550928 IGKV6D-41A0A0C4DH26 115 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 A0A0D9SFI3 127 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 WDR46O15213 610 aaKnown RBP16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 INHAP05111 366 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 XRCC5P13010 732 aaKnown RBP16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 SDSP20132 328 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 CYP2B6P20813 491 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 NMIQ13287 307 aaPredicted RBP16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 MORN1Q5T089 497 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 NEDD1Q8NHV4 660 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 MKL1Q969V6 931 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 GOPCQ9HD26 462 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 CLIP2Q9UDT6 1046 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 PLXNB2O15031 1838 aa16.01■□□□□ 0.15
CR383656.13-201ENST00000550928 CENPFP49454 3210 aa16■□□□□ 0.15
CR383656.13-201ENST00000550928 FLOT1O75955 427 aa16■□□□□ 0.15
CR383656.13-201ENST00000550928 GJA8P48165 433 aa16■□□□□ 0.15
CR383656.13-201ENST00000550928 CTDSPL2Q05D32 466 aa16■□□□□ 0.15
CR383656.13-201ENST00000550928 SOCS4Q8WXH5 440 aa16■□□□□ 0.15
CR383656.13-201ENST00000550928 ANAPC4Q9UJX5 808 aa16■□□□□ 0.15
CR383656.13-201ENST00000550928 RLFQ13129 1914 aa16■□□□□ 0.15
CR383656.13-201ENST00000550928 F5H6K3 240 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 SGPL1O95470 568 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 FGAP02671 866 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 HMGCRP04035 888 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 TSPY3P0CV98 308 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 TSPY8P0CW00 308 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 PTPREP23469 700 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 TFAP4Q01664 338 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 KLRC3Q07444 240 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 MB21D1Q8N884 522 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 ATG4CQ96DT6 458 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 CWC22Q9HCG8 908 aaKnown RBP15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 INCENPQ9NQS7 918 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 MTMR4Q9NYA4 1195 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 ADAMTS5Q9UNA0 930 aa15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 GREB1LQ9C091 1923 aaPredicted RBP15.99■□□□□ 0.15
CR383656.13-201ENST00000550928 SLC15A5A6NIM6 579 aa15.98■□□□□ 0.15
CR383656.13-201ENST00000550928 RAD21O60216 631 aa15.98■□□□□ 0.15
CR383656.13-201ENST00000550928 HSPD1P10809 573 aaKnown RBP15.98■□□□□ 0.15
CR383656.13-201ENST00000550928 CAPN2P17655 700 aa15.98■□□□□ 0.15
CR383656.13-201ENST00000550928 RGS2P41220 211 aa15.98■□□□□ 0.15
CR383656.13-201ENST00000550928 TRIM32Q13049 653 aa15.98■□□□□ 0.15
CR383656.13-201ENST00000550928 MAP2K5Q13163 448 aa15.98■□□□□ 0.15
CR383656.13-201ENST00000550928 FAM47AQ5JRC9 791 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms