RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 COL11A2P13942 1736 aaPredicted RBP17.8■□□□□ 0.44
SCN8A-206ENST00000550891 STAG2Q8N3U4 1231 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 CCDC148Q8NFR7 591 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 CEP95Q96GE4 821 aa17.8■□□□□ 0.44
SCN8A-206ENST00000550891 C21orf2O43822 256 aa17.79■□□□□ 0.44
SCN8A-206ENST00000550891 TOB1P50616 345 aaPredicted RBP17.79■□□□□ 0.44
SCN8A-206ENST00000550891 CCDC34Q96HJ3 373 aa17.79■□□□□ 0.44
SCN8A-206ENST00000550891 KLRF2D3W0D1 207 aa17.79■□□□□ 0.44
SCN8A-206ENST00000550891 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
SCN8A-206ENST00000550891 OSBPL5Q9H0X9 879 aaPredicted RBP17.79■□□□□ 0.44
SCN8A-206ENST00000550891 MYH6P13533 1939 aa17.79■□□□□ 0.44
SCN8A-206ENST00000550891 MPHOSPH10O00566 681 aaKnown RBP17.78■□□□□ 0.44
SCN8A-206ENST00000550891 HEATR3Q7Z4Q2 680 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 KCNQ5Q9NR82 932 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 KIAA1468Q9P260 1216 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 SEC63Q9UGP8 760 aaKnown RBP17.78■□□□□ 0.44
SCN8A-206ENST00000550891 KCNH3Q9ULD8 1083 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 ECM29Q5VYK3 1845 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 RESP18Q5W5W9 173 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 SHC4Q6S5L8 630 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 TTLL6Q8N841 843 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 CNNM3Q8NE01 707 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 ERCC4Q92889 916 aaPredicted RBP17.78■□□□□ 0.44
SCN8A-206ENST00000550891 ZDHHC15Q96MV8 337 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 TIGD1Q96MW7 591 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 DDX4Q9NQI0 724 aaKnown RBP17.78■□□□□ 0.44
SCN8A-206ENST00000550891 MAD2L2Q9UI95 211 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 GOLGA8HP0CJ92 632 aa17.78■□□□□ 0.44
SCN8A-206ENST00000550891 FKBP1AP62942 108 aaKnown RBP17.78■□□□□ 0.44
SCN8A-206ENST00000550891 DLEC1Q9Y238 1755 aa17.77■□□□□ 0.44
SCN8A-206ENST00000550891 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.44
SCN8A-206ENST00000550891 KIAA2012Q0VF49 1180 aa17.77■□□□□ 0.44
SCN8A-206ENST00000550891 APOBEC3HQ6NTF7 200 aaKnown RBP17.77■□□□□ 0.44
SCN8A-206ENST00000550891 GPKOWQ92917 476 aaPredicted RBP eCLIP17.77■□□□□ 0.44
SCN8A-206ENST00000550891 SH3GLB2Q9NR46 395 aa17.77■□□□□ 0.44
SCN8A-206ENST00000550891 GOLGA6L6A8MZA4 724 aa17.77■□□□□ 0.43
SCN8A-206ENST00000550891 HDLBPQ00341 1268 aaKnown RBP17.77■□□□□ 0.43
SCN8A-206ENST00000550891 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.43
SCN8A-206ENST00000550891 DACT2Q5SW24 774 aa17.77■□□□□ 0.43
SCN8A-206ENST00000550891 PIK3AP1Q6ZUJ8 805 aa17.77■□□□□ 0.43
SCN8A-206ENST00000550891 CCDC12Q8WUD4 166 aaPredicted RBP17.77■□□□□ 0.43
SCN8A-206ENST00000550891 RRAGDQ9NQL2 400 aaPredicted RBP17.77■□□□□ 0.43
SCN8A-206ENST00000550891 PTPREP23469 700 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 ATP2B2Q01814 1243 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 TCP10Q12799 353 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 CCDC93Q567U6 631 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 TTC38Q5R3I4 469 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 TRIM5Q9C035 493 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 HOMER1Q86YM7 354 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 BLIDQ8IZY5 108 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 RRP36Q96EU6 259 aaKnown RBP17.76■□□□□ 0.43
SCN8A-206ENST00000550891 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 PALM3A6NDB9 673 aaPredicted RBP17.76■□□□□ 0.43
SCN8A-206ENST00000550891 SPECC1Q5M775 1068 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 PPP4R3BQ5MIZ7 849 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 DRC7Q8IY82 874 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 MRIQ9BWK5 157 aa17.76■□□□□ 0.43
SCN8A-206ENST00000550891 DHX36Q9H2U1 1008 aaKnown RBP17.76■□□□□ 0.43
SCN8A-206ENST00000550891 SRPRBQ9Y5M8 271 aaKnown RBP17.76■□□□□ 0.43
SCN8A-206ENST00000550891 MYH1P12882 1939 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 SOGA3Q5TF21 947 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 USP17L2Q6R6M4 530 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 RTKN2Q8IZC4 609 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 FAM205CA6NFA0 338 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 BIN1O00499 593 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 TRAPPC10P48553 1259 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
SCN8A-206ENST00000550891 ZNF174Q15697 407 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 SLC16A10Q8TF71 515 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 VAT1LQ9HCJ6 419 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 MTMR4Q9NYA4 1195 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 FBXO2Q9UK22 296 aaPredicted RBP17.75■□□□□ 0.43
SCN8A-206ENST00000550891 HPSEQ9Y251 543 aa17.75■□□□□ 0.43
SCN8A-206ENST00000550891 AKR1B1P15121 316 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 TPM4P67936 248 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 ZNF579Q8NAF0 562 aaKnown RBP17.74■□□□□ 0.43
SCN8A-206ENST00000550891 PCDHA4Q9UN74 947 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 TTLL1O95922 423 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 GABPAQ06546 454 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 NFIAQ12857 509 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 GALNT17Q6IS24 598 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 FERMT2Q96AC1 680 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 SPZ1Q9BXG8 430 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 CLIP2Q9UDT6 1046 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 SERPINA10Q9UK55 444 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 SLX4Q8IY92 1834 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 CACNB3P54284 484 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 NAPAP54920 295 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 C11orf57Q6ZUT1 292 aaPredicted RBP17.74■□□□□ 0.43
SCN8A-206ENST00000550891 LRRC47Q8N1G4 583 aaKnown RBP17.74■□□□□ 0.43
SCN8A-206ENST00000550891 C7orf43Q8WVR3 580 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 SHISA4Q96DD7 197 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 PDGFDQ9GZP0 370 aaPredicted RBP17.74■□□□□ 0.43
SCN8A-206ENST00000550891 TMOD2Q9NZR1 351 aa17.74■□□□□ 0.43
SCN8A-206ENST00000550891 LARGE2Q8N3Y3 721 aa17.73■□□□□ 0.43
SCN8A-206ENST00000550891 CCDC17Q96LX7 622 aa17.73■□□□□ 0.43
SCN8A-206ENST00000550891 MYO3BQ8WXR4 1341 aa17.73■□□□□ 0.43
SCN8A-206ENST00000550891 PI4KBQ9UBF8 816 aa17.73■□□□□ 0.43
SCN8A-206ENST00000550891 RAD21O60216 631 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms