RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 RNF41Q9H4P4 317 aaPredicted RBP16.26■□□□□ 0.19
TROAP-213ENST00000550709 VCPKMTQ9H867 229 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
TROAP-213ENST00000550709 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
TROAP-213ENST00000550709 NEDD4P46934 1319 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 PEX10O60683 326 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 TTLL1O95922 423 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 FGRP09769 529 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 BCRP11274 1271 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 CATSPERGQ6ZRH7 1159 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 CTU1Q7Z7A3 348 aaKnown RBP16.25■□□□□ 0.19
TROAP-213ENST00000550709 LRRC47Q8N1G4 583 aaKnown RBP16.25■□□□□ 0.19
TROAP-213ENST00000550709 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 ARHGAP39Q9C0H5 1083 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 ANO2Q9NQ90 1003 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 STX8Q9UNK0 236 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 TRIM17Q9Y577 477 aa16.25■□□□□ 0.19
TROAP-213ENST00000550709 HERVK_113P62684 666 aa16.24■□□□□ 0.19
TROAP-213ENST00000550709 CAP1Q01518 475 aa16.24■□□□□ 0.19
TROAP-213ENST00000550709 KIF22Q14807 665 aa16.24■□□□□ 0.19
TROAP-213ENST00000550709 LPAR1Q92633 364 aa16.24■□□□□ 0.19
TROAP-213ENST00000550709 EFCC1Q9HA90 598 aa16.24■□□□□ 0.19
TROAP-213ENST00000550709 IL17RBQ9NRM6 502 aa16.24■□□□□ 0.19
TROAP-213ENST00000550709 RBM8AQ9Y5S9 174 aaKnown RBP16.24■□□□□ 0.19
TROAP-213ENST00000550709 B4E1Z4 1266 aa16.23■□□□□ 0.19
TROAP-213ENST00000550709 PCP11498 1178 aaKnown RBP16.23■□□□□ 0.19
TROAP-213ENST00000550709 GCLCP48506 637 aaPredicted RBP16.23■□□□□ 0.19
TROAP-213ENST00000550709 LACTBP83111 547 aaPredicted RBP16.23■□□□□ 0.19
TROAP-213ENST00000550709 ESR2Q92731 530 aa16.23■□□□□ 0.19
TROAP-213ENST00000550709 MAP4K1Q92918 833 aa16.23■□□□□ 0.19
TROAP-213ENST00000550709 NUP88Q99567 741 aaPredicted RBP16.23■□□□□ 0.19
TROAP-213ENST00000550709 PAGR1Q9BTK6 254 aa16.23■□□□□ 0.19
TROAP-213ENST00000550709 MCOLN1Q9GZU1 580 aa16.23■□□□□ 0.19
TROAP-213ENST00000550709 LSG1Q9H089 658 aaKnown RBP16.23■□□□□ 0.19
TROAP-213ENST00000550709 ISY1Q9ULR0 285 aaKnown RBP16.23■□□□□ 0.19
TROAP-213ENST00000550709 MTMR7Q9Y216 660 aa16.23■□□□□ 0.19
TROAP-213ENST00000550709 TAF6LQ9Y6J9 622 aa16.23■□□□□ 0.19
TROAP-213ENST00000550709 PHIPQ8WWQ0 1821 aa16.23■□□□□ 0.19
TROAP-213ENST00000550709 PLIN4Q96Q06 1357 aa16.23■□□□□ 0.19
TROAP-213ENST00000550709 F5H6K3 240 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 KDM4AO75164 1064 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
TROAP-213ENST00000550709 NDUFB10O96000 172 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 CYP21A2P08686 494 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 PSMC4P43686 418 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 KLRC3Q07444 240 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 OTOP1Q7RTM1 612 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 MKL1Q969V6 931 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 ZKSCAN3Q9BRR0 538 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 CASP8AP2Q9UKL3 1982 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 ATAD5Q96QE3 1844 aa16.22■□□□□ 0.19
TROAP-213ENST00000550709 WDR46O15213 610 aaKnown RBP16.21■□□□□ 0.19
TROAP-213ENST00000550709 FLOT1O75955 427 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 CTGFP29279 349 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 ARHGEF6Q15052 776 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 PPP4R3BQ5MIZ7 849 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 SLFN13Q68D06 897 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 POTEEQ6S8J3 1075 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 TRIM47Q96LD4 638 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 KRT23Q9C075 422 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 FBXO28Q9NVF7 368 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 RBPJLQ9UBG7 517 aa16.21■□□□□ 0.19
TROAP-213ENST00000550709 SPDYE16A6NNV3 312 aaPredicted RBP16.2■□□□□ 0.18
TROAP-213ENST00000550709 COG2Q14746 738 aa16.2■□□□□ 0.18
TROAP-213ENST00000550709 FAM110CQ1W6H9 321 aa16.2■□□□□ 0.18
TROAP-213ENST00000550709 GPRC5AQ8NFJ5 357 aa16.2■□□□□ 0.18
TROAP-213ENST00000550709 CNNM2Q9H8M5 875 aa16.2■□□□□ 0.18
TROAP-213ENST00000550709 TCP11L1Q9NUJ3 509 aa16.2■□□□□ 0.18
TROAP-213ENST00000550709 HOXC10Q9NYD6 342 aa16.2■□□□□ 0.18
TROAP-213ENST00000550709 ZSWIM5Q9P217 1185 aa16.2■□□□□ 0.18
TROAP-213ENST00000550709 MCCP23508 829 aa16.19■□□□□ 0.18
TROAP-213ENST00000550709 FCGRTP55899 365 aa16.19■□□□□ 0.18
TROAP-213ENST00000550709 TRDNQ13061 729 aa16.19■□□□□ 0.18
TROAP-213ENST00000550709 Q3C1V9 767 aa16.19■□□□□ 0.18
TROAP-213ENST00000550709 ATG4CQ96DT6 458 aa16.19■□□□□ 0.18
TROAP-213ENST00000550709 TMEM47Q9BQJ4 181 aa16.19■□□□□ 0.18
TROAP-213ENST00000550709 E7EWF7 191 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 SLC27A2O14975 620 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 CNMDO75829 334 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 TOP1P11387 765 aaKnown RBP16.18■□□□□ 0.18
TROAP-213ENST00000550709 DSG3P32926 999 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 ERVK-9P63128 1117 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 ERVK-24P63145 666 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 CREB3L3Q68CJ9 461 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 STOX1Q6ZVD7 989 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 RALYLQ86SE5 291 aaKnown RBP16.18■□□□□ 0.18
TROAP-213ENST00000550709 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 CCAR1Q8IX12 1150 aaKnown RBP16.18■□□□□ 0.18
TROAP-213ENST00000550709 GMCL1P1Q8NEA9 526 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 GTF3C2Q8WUA4 911 aaPredicted RBP16.18■□□□□ 0.18
TROAP-213ENST00000550709 BTBD7Q9P203 1132 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 MORF4L1Q9UBU8 362 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 RABGAP1Q9Y3P9 1069 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 LAMB1P07942 1786 aa16.18■□□□□ 0.18
TROAP-213ENST00000550709 TNPO2O14787 897 aaKnown RBP16.17■□□□□ 0.18
TROAP-213ENST00000550709 SLC1A4P43007 532 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms