RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 LSG1Q9H089 658 aaKnown RBP13.69□□□□□ -0.22
NR4A1-215ENST00000550557 USO1O60763 962 aaKnown RBP13.69□□□□□ -0.22
NR4A1-215ENST00000550557 TTLL1O95922 423 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 RPL13P26373 211 aaKnown RBP13.69□□□□□ -0.22
NR4A1-215ENST00000550557 PKP1Q13835 747 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 PRR5LQ6MZQ0 368 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 LRWD1Q9UFC0 647 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 PAXBP1Q9Y5B6 917 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 PLEKHG2Q9H7P9 1386 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 LINC00116Q8NCU8 138 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 PHKBQ93100 1093 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 DPEP1P16444 411 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 PTH1RQ03431 593 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 SEPT7Q16181 437 aaKnown RBP13.69□□□□□ -0.22
NR4A1-215ENST00000550557 KIF4BQ2VIQ3 1234 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 OTUD6AQ7L8S5 288 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 PCDHA1Q9Y5I3 950 aa13.69□□□□□ -0.22
NR4A1-215ENST00000550557 ZEB2O60315 1214 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 HSPD1P10809 573 aaKnown RBP13.68□□□□□ -0.22
NR4A1-215ENST00000550557 UTP14CQ5TAP6 766 aaKnown RBP13.68□□□□□ -0.22
NR4A1-215ENST00000550557 MIER3Q7Z3K6 550 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 ZNF710Q8N1W2 664 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 AMNQ9BXJ7 453 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 PODXL2Q9NZ53 605 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 EXOC7Q9UPT5 735 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 FGAP02671 866 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 HOXD10P28358 340 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 PTPN12Q05209 780 aaKnown RBP13.68□□□□□ -0.22
NR4A1-215ENST00000550557 SPAG1Q07617 926 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 TAF3Q5VWG9 929 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 CCDC186Q7Z3E2 898 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 SNX29Q8TEQ0 813 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 CCDC94Q9BW85 323 aaPredicted RBP13.68□□□□□ -0.22
NR4A1-215ENST00000550557 DNM3Q9UQ16 869 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 ITSN1Q15811 1721 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 IFT172Q9UG01 1749 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 SORBS3O60504 671 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 GSDMDP57764 484 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 ZHX2Q9Y6X8 837 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 NRKQ7Z2Y5 1582 aa13.68□□□□□ -0.22
NR4A1-215ENST00000550557 BMP3P12645 472 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 SLC8A3P57103 927 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 MECOMQ03112 1051 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 TYRO3Q06418 890 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 CALCRLQ16602 461 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 TTC38Q5R3I4 469 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 AXDND1Q5T1B0 1012 aaPredicted RBP13.67□□□□□ -0.22
NR4A1-215ENST00000550557 CRAMP1Q96RY5 1269 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 REREQ9P2R6 1566 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 CUL4AQ13619 759 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 GPT2Q8TD30 523 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 COA7Q96BR5 231 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 CEP83Q9Y592 693 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 GOLGA6L10A6NI86 522 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 CALRP27797 417 aaKnown RBP13.67□□□□□ -0.22
NR4A1-215ENST00000550557 RASGRF1Q13972 1273 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 CEP135Q66GS9 1140 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 PI16Q6UXB8 463 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 ZSWIM6Q9HCJ5 1215 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 A0A0D9SFI3 127 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
NR4A1-215ENST00000550557 NR1I2O75469 434 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 NOP2P46087 812 aaKnown RBP13.67□□□□□ -0.22
NR4A1-215ENST00000550557 DNA2P51530 1060 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 GBP3Q9H0R5 595 aa13.67□□□□□ -0.22
NR4A1-215ENST00000550557 CNOT7Q9UIV1 285 aaKnown RBP13.67□□□□□ -0.22
NR4A1-215ENST00000550557 MAP2P11137 1827 aaKnown RBP13.67□□□□□ -0.22
NR4A1-215ENST00000550557 ZNF500O60304 480 aaPredicted RBP13.66□□□□□ -0.22
NR4A1-215ENST00000550557 TMOD1P28289 359 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 GPSM2P81274 684 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 MSANTD4Q8NCY6 345 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 TRMT1Q9NXH9 659 aaKnown RBP13.66□□□□□ -0.22
NR4A1-215ENST00000550557 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 MICALL2Q8IY33 904 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 UBXN4Q92575 508 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 LLPHQ9BRT6 129 aaKnown RBP13.66□□□□□ -0.22
NR4A1-215ENST00000550557 WDR70Q9NW82 654 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 VPS54Q9P1Q0 977 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 CDHR2Q9BYE9 1310 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 TRPC3Q13507 836 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 RSPH3Q86UC2 560 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 ADCY9O60503 1353 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 BICDL2A1A5D9 508 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 AKR1B10O60218 316 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 DCCP43146 1447 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 DIP2AQ14689 1571 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 PI4K2BQ8TCG2 481 aa13.66□□□□□ -0.22
NR4A1-215ENST00000550557 MTX1Q13505 466 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 TPH2Q8IWU9 490 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 SUGCTQ9HAC7 445 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 PRR16Q569H4 304 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 OTUD5Q96G74 571 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 ME3Q16798 604 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 RASEFQ8IZ41 740 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 TLR7Q9NYK1 1049 aaKnown RBP13.65□□□□□ -0.22
NR4A1-215ENST00000550557 TMCO5BA8MYB1 307 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
NR4A1-215ENST00000550557 IGKV5-2P06315 115 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms