RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 IGHA2P01877 340 aa26.21■■□□□ 1.79
SMARCC2-210ENST00000550519 SYN1P17600 705 aa26.21■■□□□ 1.79
SMARCC2-210ENST00000550519 SLFNL1Q499Z3 407 aa26.21■■□□□ 1.79
SMARCC2-210ENST00000550519 NPLOC4Q8TAT6 608 aa26.21■■□□□ 1.79
SMARCC2-210ENST00000550519 LRCH3Q96II8 777 aa26.21■■□□□ 1.79
SMARCC2-210ENST00000550519 PRKAB2O43741 272 aa26.2■■□□□ 1.78
SMARCC2-210ENST00000550519 KIAA1755Q5JYT7 1200 aa26.2■■□□□ 1.78
SMARCC2-210ENST00000550519 SIAH1Q8IUQ4 282 aa26.2■■□□□ 1.78
SMARCC2-210ENST00000550519 DYNLL2Q96FJ2 89 aa26.2■■□□□ 1.78
SMARCC2-210ENST00000550519 MOV10L1Q9BXT6 1211 aaKnown RBP26.2■■□□□ 1.78
SMARCC2-210ENST00000550519 BCL11AQ9H165 835 aa26.2■■□□□ 1.78
SMARCC2-210ENST00000550519 ATP8A2Q9NTI2 1148 aa26.2■■□□□ 1.78
SMARCC2-210ENST00000550519 MBD4O95243 580 aa26.19■■□□□ 1.78
SMARCC2-210ENST00000550519 MAGEA10P43363 369 aaPredicted RBP26.19■■□□□ 1.78
SMARCC2-210ENST00000550519 ATP2B2Q01814 1243 aa26.19■■□□□ 1.78
SMARCC2-210ENST00000550519 HAUS7Q99871 368 aa26.19■■□□□ 1.78
SMARCC2-210ENST00000550519 TANGO6Q9C0B7 1094 aa26.19■■□□□ 1.78
SMARCC2-210ENST00000550519 CHMP4BQ9H444 224 aaKnown RBP26.19■■□□□ 1.78
SMARCC2-210ENST00000550519 LRRC26Q2I0M4 334 aa26.18■■□□□ 1.78
SMARCC2-210ENST00000550519 LPAR1Q92633 364 aa26.18■■□□□ 1.78
SMARCC2-210ENST00000550519 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.18■■□□□ 1.784e-8■□□□□ 10.6
SMARCC2-210ENST00000550519 DDX20Q9UHI6 824 aaKnown RBP26.18■■□□□ 1.78
SMARCC2-210ENST00000550519 STRNO43815 780 aa26.17■■□□□ 1.78
SMARCC2-210ENST00000550519 AKR1B1P15121 316 aa26.17■■□□□ 1.78
SMARCC2-210ENST00000550519 CYP2C19P33261 490 aa26.17■■□□□ 1.78
SMARCC2-210ENST00000550519 C12orf60Q5U649 245 aa26.17■■□□□ 1.78
SMARCC2-210ENST00000550519 SHCBP1Q8NEM2 672 aa26.17■■□□□ 1.78
SMARCC2-210ENST00000550519 SPATC1LQ9H0A9 340 aa26.17■■□□□ 1.78
SMARCC2-210ENST00000550519 TMX2Q9Y320 296 aa26.17■■□□□ 1.78
SMARCC2-210ENST00000550519 SMIM22K7EJ46 135 aa26.16■■□□□ 1.78
SMARCC2-210ENST00000550519 MSCO60682 206 aa26.16■■□□□ 1.78
SMARCC2-210ENST00000550519 UBE3CQ15386 1083 aa26.16■■□□□ 1.78
SMARCC2-210ENST00000550519 MB21D1Q8N884 522 aa26.16■■□□□ 1.78
SMARCC2-210ENST00000550519 CCDC17Q96LX7 622 aa26.16■■□□□ 1.78
SMARCC2-210ENST00000550519 CHGBP05060 677 aa26.15■■□□□ 1.78
SMARCC2-210ENST00000550519 ADORA2AP29274 412 aa26.15■■□□□ 1.78
SMARCC2-210ENST00000550519 DSG3P32926 999 aa26.15■■□□□ 1.78
SMARCC2-210ENST00000550519 ICA1Q05084 483 aa26.15■■□□□ 1.78
SMARCC2-210ENST00000550519 DPP9Q86TI2 863 aa26.15■■□□□ 1.78
SMARCC2-210ENST00000550519 CLEC10AQ8IUN9 316 aa26.15■■□□□ 1.78
SMARCC2-210ENST00000550519 TRPV1Q8NER1 839 aa26.15■■□□□ 1.78
SMARCC2-210ENST00000550519 VCPKMTQ9H867 229 aa26.15■■□□□ 1.78
SMARCC2-210ENST00000550519 ARHGEF10LQ9HCE6 1279 aa26.15■■□□□ 1.78
SMARCC2-210ENST00000550519 CYP2D7A0A087X1C5 515 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 USP17L12C9JPN9 530 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 USP17L21D6R901 530 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 CYBAP13498 195 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 ERCC3P19447 782 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 CDK8P49336 464 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 LRIT3Q3SXY7 679 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 OLFML2BQ68BL8 750 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 GPR153Q6NV75 609 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 TDHQ8IZJ6 230 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 SH2D4AQ9H788 454 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 RCAN3Q9UKA8 241 aa26.14■■□□□ 1.78
SMARCC2-210ENST00000550519 CNGA1P29973 690 aa26.13■■□□□ 1.77
SMARCC2-210ENST00000550519 C16orf86Q6ZW13 317 aa26.13■■□□□ 1.77
SMARCC2-210ENST00000550519 SPICE1Q8N0Z3 855 aa26.13■■□□□ 1.77
SMARCC2-210ENST00000550519 RLFQ13129 1914 aa26.13■■□□□ 1.77
SMARCC2-210ENST00000550519 COBLO75128 1261 aa26.12■■□□□ 1.77
SMARCC2-210ENST00000550519 FLOT1O75955 427 aa26.12■■□□□ 1.77
SMARCC2-210ENST00000550519 AMOTL1Q8IY63 956 aa26.12■■□□□ 1.77
SMARCC2-210ENST00000550519 ATG4CQ96DT6 458 aa26.12■■□□□ 1.77
SMARCC2-210ENST00000550519 LRRCC1Q9C099 1032 aa26.12■■□□□ 1.77
SMARCC2-210ENST00000550519 UBE2OQ9C0C9 1292 aaKnown RBP26.12■■□□□ 1.77
SMARCC2-210ENST00000550519 SENP6Q9GZR1 1112 aaPredicted RBP26.12■■□□□ 1.77
SMARCC2-210ENST00000550519 MROH8Q9H579 483 aa26.12■■□□□ 1.77
SMARCC2-210ENST00000550519 A0A0G2JMZ2 1700 aa26.11■■□□□ 1.77
SMARCC2-210ENST00000550519 DNM1LO00429 736 aa26.11■■□□□ 1.77
SMARCC2-210ENST00000550519 WDR46O15213 610 aaKnown RBP26.11■■□□□ 1.77
SMARCC2-210ENST00000550519 ABRAQ8N0Z2 381 aa26.11■■□□□ 1.77
SMARCC2-210ENST00000550519 SLC4A4Q9Y6R1 1079 aa26.11■■□□□ 1.77
SMARCC2-210ENST00000550519 ZNF236Q9UL36 1845 aa26.11■■□□□ 1.77
SMARCC2-210ENST00000550519 CTR9Q6PD62 1173 aa26.1■■□□□ 1.77
SMARCC2-210ENST00000550519 DDRGK1Q96HY6 314 aa26.1■■□□□ 1.77
SMARCC2-210ENST00000550519 PUS7LQ9H0K6 701 aaKnown RBP26.1■■□□□ 1.77
SMARCC2-210ENST00000550519 FRMPD3Q5JV73 1810 aa26.09■■□□□ 1.77
SMARCC2-210ENST00000550519 EEF2P13639 858 aaKnown RBP26.09■■□□□ 1.77
SMARCC2-210ENST00000550519 PLS1Q14651 629 aa26.09■■□□□ 1.77
SMARCC2-210ENST00000550519 C20orf194Q5TEA3 1177 aa26.09■■□□□ 1.77
SMARCC2-210ENST00000550519 ZSCAN25Q6NSZ9 544 aa26.09■■□□□ 1.77
SMARCC2-210ENST00000550519 NCAPG2Q86XI2 1143 aa26.09■■□□□ 1.77
SMARCC2-210ENST00000550519 KANSL2Q9H9L4 492 aa26.09■■□□□ 1.77
SMARCC2-210ENST00000550519 SLC5A4Q9NY91 659 aa26.09■■□□□ 1.77
SMARCC2-210ENST00000550519 ADAMTS5Q9UNA0 930 aa26.09■■□□□ 1.77
SMARCC2-210ENST00000550519 SMARCA5O60264 1052 aaPredicted RBP26.08■■□□□ 1.77
SMARCC2-210ENST00000550519 TMEM132BQ14DG7 1078 aa26.08■■□□□ 1.77
SMARCC2-210ENST00000550519 BAZ2AQ9UIF9 1905 aaKnown RBP26.08■■□□□ 1.76
SMARCC2-210ENST00000550519 DNAH12Q6ZR08 3092 aa26.07■■□□□ 1.76
SMARCC2-210ENST00000550519 MDM2Q00987 491 aaPredicted RBP26.07■■□□□ 1.76
SMARCC2-210ENST00000550519 SEPT4O43236 478 aa26.06■■□□□ 1.76
SMARCC2-210ENST00000550519 SLC25A27O95847 323 aa26.06■■□□□ 1.76
SMARCC2-210ENST00000550519 ATN1P54259 1190 aaPredicted RBP26.06■■□□□ 1.76
SMARCC2-210ENST00000550519 ARRDC4Q8NCT1 418 aa26.06■■□□□ 1.76
SMARCC2-210ENST00000550519 ECHDC1Q9NTX5 307 aa26.06■■□□□ 1.76
SMARCC2-210ENST00000550519 FCER1AP12319 257 aa26.05■■□□□ 1.76
SMARCC2-210ENST00000550519 GJC2Q5T442 439 aaPredicted RBP26.05■■□□□ 1.76
SMARCC2-210ENST00000550519 DEFB123Q8N688 67 aa26.05■■□□□ 1.76
SMARCC2-210ENST00000550519 MAML3Q96JK9 1138 aa26.05■■□□□ 1.76
SMARCC2-210ENST00000550519 STRBPQ96SI9 672 aaKnown RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms