RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 UBE2OQ9C0C9 1292 aaKnown RBP27.83■■■□□ 2.05
SMARCD1-209ENST00000550477 ZBTB40Q9NUA8 1239 aa27.83■■■□□ 2.05
SMARCD1-209ENST00000550477 COG6Q9Y2V7 657 aa27.83■■■□□ 2.05
SMARCD1-209ENST00000550477 PFASO15067 1338 aa27.83■■■□□ 2.05
SMARCD1-209ENST00000550477 TCRBV5S4A2TA0A5A2 114 aa27.82■■■□□ 2.04
SMARCD1-209ENST00000550477 COL6A1P12109 1028 aa27.82■■■□□ 2.04
SMARCD1-209ENST00000550477 ZSCAN25Q6NSZ9 544 aa27.82■■■□□ 2.04
SMARCD1-209ENST00000550477 GPR153Q6NV75 609 aa27.82■■■□□ 2.04
SMARCD1-209ENST00000550477 BOLA2Q9H3K6 86 aa27.82■■■□□ 2.04
SMARCD1-209ENST00000550477 DDX20Q9UHI6 824 aaKnown RBP27.82■■■□□ 2.04
SMARCD1-209ENST00000550477 MAGEA10P43363 369 aaPredicted RBP27.81■■■□□ 2.04
SMARCD1-209ENST00000550477 SHCBP1Q8NEM2 672 aa27.81■■■□□ 2.04
SMARCD1-209ENST00000550477 ARMT1Q9H993 441 aa27.81■■■□□ 2.04
SMARCD1-209ENST00000550477 A0A1W2PRG0 241 aa27.8■■■□□ 2.04
SMARCD1-209ENST00000550477 ATP5JP18859 108 aa27.8■■■□□ 2.04
SMARCD1-209ENST00000550477 ADD2P35612 726 aa27.8■■■□□ 2.04
SMARCD1-209ENST00000550477 TDHQ8IZJ6 230 aa27.8■■■□□ 2.04
SMARCD1-209ENST00000550477 SPATC1LQ9H0A9 340 aa27.8■■■□□ 2.04
SMARCD1-209ENST00000550477 MBD4O95243 580 aa27.79■■■□□ 2.04
SMARCD1-209ENST00000550477 PLS1Q14651 629 aa27.79■■■□□ 2.04
SMARCD1-209ENST00000550477 LRCH3Q96II8 777 aa27.79■■■□□ 2.04
SMARCD1-209ENST00000550477 SENP6Q9GZR1 1112 aaPredicted RBP27.79■■■□□ 2.04
SMARCD1-209ENST00000550477 MROH8Q9H579 483 aa27.79■■■□□ 2.04
SMARCD1-209ENST00000550477 FLRT1Q9NZU1 646 aa27.79■■■□□ 2.04
SMARCD1-209ENST00000550477 RANBP2P49792 3224 aaKnown RBP27.78■■■□□ 2.04
SMARCD1-209ENST00000550477 SOX1O00570 391 aaPredicted RBP27.78■■■□□ 2.04
SMARCD1-209ENST00000550477 FLOT1O75955 427 aa27.78■■■□□ 2.04
SMARCD1-209ENST00000550477 ICA1Q05084 483 aa27.78■■■□□ 2.04
SMARCD1-209ENST00000550477 UBE3CQ15386 1083 aa27.78■■■□□ 2.04
SMARCD1-209ENST00000550477 LRIT3Q3SXY7 679 aa27.78■■■□□ 2.04
SMARCD1-209ENST00000550477 ARRDC4Q8NCT1 418 aa27.78■■■□□ 2.04
SMARCD1-209ENST00000550477 HAUS7Q99871 368 aa27.78■■■□□ 2.04
SMARCD1-209ENST00000550477 MOV10L1Q9BXT6 1211 aaKnown RBP27.78■■■□□ 2.04
SMARCD1-209ENST00000550477 ADORA2AP29274 412 aa27.77■■■□□ 2.04
SMARCD1-209ENST00000550477 DSG3P32926 999 aa27.77■■■□□ 2.04
SMARCD1-209ENST00000550477 OLFML2BQ68BL8 750 aa27.77■■■□□ 2.04
SMARCD1-209ENST00000550477 SIRT2Q8IXJ6 389 aa27.77■■■□□ 2.04
SMARCD1-209ENST00000550477 NPLOC4Q8TAT6 608 aa27.77■■■□□ 2.04
SMARCD1-209ENST00000550477 LBHD1Q9BQE6 289 aaPredicted RBP27.77■■■□□ 2.04
SMARCD1-209ENST00000550477 PRKAG2Q9UGJ0 569 aa27.77■■■□□ 2.04
SMARCD1-209ENST00000550477 TMX2Q9Y320 296 aa27.77■■■□□ 2.04
SMARCD1-209ENST00000550477 MYH8P13535 1937 aa27.77■■■□□ 2.04
SMARCD1-209ENST00000550477 CYP2D6P10635 497 aa27.76■■■□□ 2.03
SMARCD1-209ENST00000550477 ERCC3P19447 782 aa27.76■■■□□ 2.03
SMARCD1-209ENST00000550477 CYP2C19P33261 490 aa27.76■■■□□ 2.03
SMARCD1-209ENST00000550477 LRRC26Q2I0M4 334 aa27.76■■■□□ 2.03
SMARCD1-209ENST00000550477 ABRAQ8N0Z2 381 aa27.76■■■□□ 2.03
SMARCD1-209ENST00000550477 SLC44A5Q8NCS7 719 aa27.76■■■□□ 2.03
SMARCD1-209ENST00000550477 DYNLL2Q96FJ2 89 aa27.76■■■□□ 2.03
SMARCD1-209ENST00000550477 VCPKMTQ9H867 229 aa27.76■■■□□ 2.03
SMARCD1-209ENST00000550477 DNM1LO00429 736 aa27.75■■■□□ 2.03
SMARCD1-209ENST00000550477 CDK8P49336 464 aa27.75■■■□□ 2.03
SMARCD1-209ENST00000550477 C12orf60Q5U649 245 aa27.75■■■□□ 2.03
SMARCD1-209ENST00000550477 NCAPG2Q86XI2 1143 aa27.75■■■□□ 2.03
SMARCD1-209ENST00000550477 SLC17A8Q8NDX2 589 aa27.75■■■□□ 2.03
SMARCD1-209ENST00000550477 LRRCC1Q9C099 1032 aa27.75■■■□□ 2.03
SMARCD1-209ENST00000550477 SLC4A4Q9Y6R1 1079 aa27.75■■■□□ 2.03
SMARCD1-209ENST00000550477 USP17L12C9JPN9 530 aa27.74■■■□□ 2.03
SMARCD1-209ENST00000550477 USP17L21D6R901 530 aa27.74■■■□□ 2.03
SMARCD1-209ENST00000550477 WDR46O15213 610 aaKnown RBP27.74■■■□□ 2.03
SMARCD1-209ENST00000550477 PRKAB2O43741 272 aa27.74■■■□□ 2.03
SMARCD1-209ENST00000550477 SLC25A27O95847 323 aa27.74■■■□□ 2.03
SMARCD1-209ENST00000550477 AKR1B1P15121 316 aa27.74■■■□□ 2.03
SMARCD1-209ENST00000550477 KANSL2Q9H9L4 492 aa27.74■■■□□ 2.03
SMARCD1-209ENST00000550477 FCER1AP12319 257 aa27.73■■■□□ 2.03
SMARCD1-209ENST00000550477 SAMD1Q6SPF0 538 aaPredicted RBP27.73■■■□□ 2.03
SMARCD1-209ENST00000550477 SPICE1Q8N0Z3 855 aa27.73■■■□□ 2.03
SMARCD1-209ENST00000550477 GOPCQ9HD26 462 aa27.73■■■□□ 2.03
SMARCD1-209ENST00000550477 RCAN3Q9UKA8 241 aa27.73■■■□□ 2.03
SMARCD1-209ENST00000550477 SZT2Q5T011 3432 aa27.73■■■□□ 2.03
SMARCD1-209ENST00000550477 KBTBD13C9JR72 458 aa27.72■■■□□ 2.03
SMARCD1-209ENST00000550477 CYBAP13498 195 aa27.72■■■□□ 2.03
SMARCD1-209ENST00000550477 EVX2Q03828 476 aa27.72■■■□□ 2.03
SMARCD1-209ENST00000550477 C16orf86Q6ZW13 317 aa27.72■■■□□ 2.03
SMARCD1-209ENST00000550477 DEFB123Q8N688 67 aa27.71■■■□□ 2.03
SMARCD1-209ENST00000550477 SEPT4O43236 478 aa27.7■■■□□ 2.02
SMARCD1-209ENST00000550477 MDM2Q00987 491 aaPredicted RBP27.7■■■□□ 2.02
SMARCD1-209ENST00000550477 ATG4CQ96DT6 458 aa27.7■■■□□ 2.02
SMARCD1-209ENST00000550477 ARPP21Q9UBL0 812 aaPredicted RBP27.7■■■□□ 2.02
SMARCD1-209ENST00000550477 BAZ2AQ9UIF9 1905 aaKnown RBP27.7■■■□□ 2.02
SMARCD1-209ENST00000550477 RAD21O60216 631 aa27.69■■■□□ 2.02
SMARCD1-209ENST00000550477 EEF2P13639 858 aaKnown RBP27.69■■■□□ 2.02
SMARCD1-209ENST00000550477 COPB2P35606 906 aa27.69■■■□□ 2.02
SMARCD1-209ENST00000550477 ATN1P54259 1190 aaPredicted RBP27.69■■■□□ 2.02
SMARCD1-209ENST00000550477 GPATCH3Q96I76 525 aa27.69■■■□□ 2.02
SMARCD1-209ENST00000550477 KIAA1755Q5JYT7 1200 aa27.68■■■□□ 2.02
SMARCD1-209ENST00000550477 GJC2Q5T442 439 aaPredicted RBP27.68■■■□□ 2.02
SMARCD1-209ENST00000550477 SIAH1Q8IUQ4 282 aa27.68■■■□□ 2.02
SMARCD1-209ENST00000550477 TRPV1Q8NER1 839 aa27.68■■■□□ 2.02
SMARCD1-209ENST00000550477 FRMPD3Q5JV73 1810 aa27.68■■■□□ 2.02
SMARCD1-209ENST00000550477 ZNF236Q9UL36 1845 aa27.67■■■□□ 2.02
SMARCD1-209ENST00000550477 COBLO75128 1261 aa27.67■■■□□ 2.02
SMARCD1-209ENST00000550477 IGHA2P01877 340 aa27.67■■■□□ 2.02
SMARCD1-209ENST00000550477 MYCNP04198 464 aaPredicted RBP27.67■■■□□ 2.02
SMARCD1-209ENST00000550477 SLFNL1Q499Z3 407 aa27.67■■■□□ 2.02
SMARCD1-209ENST00000550477 CTR9Q6PD62 1173 aa27.67■■■□□ 2.02
SMARCD1-209ENST00000550477 MKNK2Q9HBH9 465 aa27.67■■■□□ 2.02
SMARCD1-209ENST00000550477 ECHDC1Q9NTX5 307 aa27.67■■■□□ 2.02
SMARCD1-209ENST00000550477 NRBP1Q9UHY1 535 aa27.67■■■□□ 2.02
SMARCD1-209ENST00000550477 CYP2D7A0A087X1C5 515 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms