RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 DIS3L2Q8IYB7 885 aaKnown RBP28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 LINC00301Q8NCQ3 95 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 TMOD2Q9NZR1 351 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 YEATS4O95619 227 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 SLURP2P0DP57 97 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 PFKFB3Q16875 520 aaPredicted RBP28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 SLC35G1Q2M3R5 365 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 FKBP1CQ5VVH2 108 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 GAS2L3Q86XJ1 694 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 ZSCAN29Q8IWY8 852 aaPredicted RBP28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 LZTS2Q9BRK4 669 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 hCG_1642624A0A1W2PR95 340 aa28.37■■■□□ 2.13
TGFBR1-207ENST00000549766 GOLGA6L3A6NEY3 463 aa28.37■■■□□ 2.13
TGFBR1-207ENST00000549766 BTBD18B2RXH4 712 aa28.37■■■□□ 2.13
TGFBR1-207ENST00000549766 PRELPP51888 382 aa28.37■■■□□ 2.13
TGFBR1-207ENST00000549766 NOSTRINQ8IVI9 506 aa28.37■■■□□ 2.13
TGFBR1-207ENST00000549766 CLIC4Q9Y696 253 aa28.37■■■□□ 2.13
TGFBR1-207ENST00000549766 TTLL1O95922 423 aa28.36■■■□□ 2.13
TGFBR1-207ENST00000549766 SCG2P13521 617 aa28.36■■■□□ 2.13
TGFBR1-207ENST00000549766 SPON1Q9HCB6 807 aa28.36■■■□□ 2.13
TGFBR1-207ENST00000549766 VPS54Q9P1Q0 977 aa28.36■■■□□ 2.13
TGFBR1-207ENST00000549766 SNHG28P0DPA3 235 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 RPS12P25398 132 aaKnown RBP28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 SMARCA1P28370 1054 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 RASSF7Q02833 373 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 GNL2Q13823 731 aaKnown RBP28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 PPP4R3BQ5MIZ7 849 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 CCDC183Q5T5S1 534 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 FAM151AQ8WW52 585 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 GOLGA6L4A6NEF3 574 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 FZD9O00144 591 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 CYTH3O43739 400 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 ANO1Q5XXA6 986 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 SPZ1Q9BXG8 430 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 CNTNAP1P78357 1384 aa28.35■■■□□ 2.13
TGFBR1-207ENST00000549766 CLRN2A0PK11 232 aa28.34■■■□□ 2.13
TGFBR1-207ENST00000549766 PARP1P09874 1014 aaKnown RBP28.34■■■□□ 2.13
TGFBR1-207ENST00000549766 ZNF280AP59817 542 aaPredicted RBP28.34■■■□□ 2.13
TGFBR1-207ENST00000549766 NPY5RQ15761 445 aa28.34■■■□□ 2.13
TGFBR1-207ENST00000549766 CERKLQ49MI3 558 aaPredicted RBP28.34■■■□□ 2.13
TGFBR1-207ENST00000549766 FAM196BA6NMK8 535 aa28.33■■■□□ 2.13
TGFBR1-207ENST00000549766 PDHBP11177 359 aa28.33■■■□□ 2.13
TGFBR1-207ENST00000549766 LIG1P18858 919 aa28.33■■■□□ 2.13
TGFBR1-207ENST00000549766 RASGRP2Q7LDG7 609 aa28.33■■■□□ 2.13
TGFBR1-207ENST00000549766 KCNG4Q8TDN1 519 aa28.33■■■□□ 2.13
TGFBR1-207ENST00000549766 TCP10L2B9ZVM9 353 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 KLRF2D3W0D1 207 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 CLEC10AQ8IUN9 316 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 OXER1Q8TDS5 423 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 CLIP2Q9UDT6 1046 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 SYCE3A1L190 88 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 VEGFAP15692 232 aaPredicted RBP28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 NR5A1Q13285 461 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 TPRNQ4KMQ1 711 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 USP17L2Q6R6M4 530 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 CSRNP1Q96S65 589 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 TRIM34Q9BYJ4 488 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 MYOZ2Q9NPC6 264 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 SH3GLB2Q9NR46 395 aa28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 HERC5Q9UII4 1024 aaKnown RBP28.32■■■□□ 2.12
TGFBR1-207ENST00000549766 USP17L5A8MUK1 530 aa28.31■■■□□ 2.12
TGFBR1-207ENST00000549766 WNT10BO00744 389 aa28.31■■■□□ 2.12
TGFBR1-207ENST00000549766 GOLGA8HP0CJ92 632 aa28.31■■■□□ 2.12
TGFBR1-207ENST00000549766 SLC39A14Q15043 492 aa28.31■■■□□ 2.12
TGFBR1-207ENST00000549766 STK38Q15208 465 aa28.31■■■□□ 2.12
TGFBR1-207ENST00000549766 LRSAM1Q6UWE0 723 aa28.31■■■□□ 2.12
TGFBR1-207ENST00000549766 FAM83AQ86UY5 434 aa28.31■■■□□ 2.12
TGFBR1-207ENST00000549766 MKL1Q969V6 931 aa28.31■■■□□ 2.12
TGFBR1-207ENST00000549766 PCDHA7Q9UN72 937 aa28.31■■■□□ 2.12
TGFBR1-207ENST00000549766 MPHOSPH10O00566 681 aaKnown RBP28.3■■■□□ 2.12
TGFBR1-207ENST00000549766 KRT2P35908 639 aa28.3■■■□□ 2.12
TGFBR1-207ENST00000549766 PTPAQ15257 358 aa28.3■■■□□ 2.12
TGFBR1-207ENST00000549766 L1TD1Q5T7N2 865 aaKnown RBP28.3■■■□□ 2.12
TGFBR1-207ENST00000549766 LRRC47Q8N1G4 583 aaKnown RBP28.3■■■□□ 2.12
TGFBR1-207ENST00000549766 TNFRSF25Q93038 417 aa28.3■■■□□ 2.12
TGFBR1-207ENST00000549766 NYAP2Q9P242 653 aa28.3■■■□□ 2.12
TGFBR1-207ENST00000549766 MTMR7Q9Y216 660 aa28.3■■■□□ 2.12
TGFBR1-207ENST00000549766 SPTLC2O15270 562 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 LETM1O95202 739 aaPredicted RBP28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 TOB1P50616 345 aaPredicted RBP28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 EIF6P56537 245 aaKnown RBP28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 SF3A1Q15459 793 aaKnown RBP28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 ASPRV1Q53RT3 343 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 ADALQ6DHV7 355 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 TMEM179Q6ZVK1 233 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 FAM177A1Q8N128 213 aaPredicted RBP28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 BICD2Q8TD16 824 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 DPF2Q92785 391 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 KANSL2Q9H9L4 492 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 SHTN1A0MZ66 631 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 MYO1BO43795 1136 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 RILPL1Q5EBL4 403 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 PGAP2Q9UHJ9 254 aa28.29■■■□□ 2.12
TGFBR1-207ENST00000549766 A0A1W2PQ27 194 aa28.28■■■□□ 2.12
TGFBR1-207ENST00000549766 A0A1W2PQ64 194 aa28.28■■■□□ 2.12
TGFBR1-207ENST00000549766 A0A1W2PQD8 194 aa28.28■■■□□ 2.12
TGFBR1-207ENST00000549766 ME1P48163 572 aa28.28■■■□□ 2.12
TGFBR1-207ENST00000549766 NBPF9Q3BBW0 867 aa28.28■■■□□ 2.12
TGFBR1-207ENST00000549766 RIOX1Q9H6W3 641 aa28.28■■■□□ 2.12
TGFBR1-207ENST00000549766 PPP6R2O75170 966 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms