RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 DPP9Q86TI2 863 aa18.83■□□□□ 0.6
TCHP-208ENST00000549550 CERS3Q8IU89 383 aa18.83■□□□□ 0.6
TCHP-208ENST00000549550 ARRDC4Q8NCT1 418 aa18.83■□□□□ 0.6
TCHP-208ENST00000549550 CDX2Q99626 313 aaPredicted RBP18.83■□□□□ 0.6
TCHP-208ENST00000549550 CABP5Q9NP86 173 aa18.83■□□□□ 0.6
TCHP-208ENST00000549550 PRDM5Q9NQX1 630 aaPredicted RBP18.83■□□□□ 0.6
TCHP-208ENST00000549550 TLR7Q9NYK1 1049 aaKnown RBP18.83■□□□□ 0.6
TCHP-208ENST00000549550 COL11A1P12107 1806 aaPredicted RBP18.82■□□□□ 0.6
TCHP-208ENST00000549550 KBTBD13C9JR72 458 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 SURF6O75683 361 aaKnown RBP18.82■□□□□ 0.6
TCHP-208ENST00000549550 ADORA2AP29274 412 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 SHMT1P34896 483 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 C9orf50Q5SZB4 431 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 ANO1Q5XXA6 986 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 SLC39A5Q6ZMH5 540 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 TTC6Q86TZ1 520 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 MAGEB6Q8N7X4 407 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 SSH3Q8TE77 659 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 PLXNA1Q9UIW2 1896 aa18.82■□□□□ 0.6
TCHP-208ENST00000549550 GUCY1A2P33402 732 aa18.81■□□□□ 0.6
TCHP-208ENST00000549550 PLCD1P51178 756 aa18.81■□□□□ 0.6
TCHP-208ENST00000549550 OLFML2BQ68BL8 750 aa18.81■□□□□ 0.6
TCHP-208ENST00000549550 FTSJ3Q8IY81 847 aaKnown RBP18.81■□□□□ 0.6
TCHP-208ENST00000549550 MAFAQ8NHW3 353 aaPredicted RBP18.81■□□□□ 0.6
TCHP-208ENST00000549550 EXOC6Q8TAG9 804 aa18.81■□□□□ 0.6
TCHP-208ENST00000549550 MOV10L1Q9BXT6 1211 aaKnown RBP18.81■□□□□ 0.6
TCHP-208ENST00000549550 SEMA6BQ9H3T3 888 aa18.81■□□□□ 0.6
TCHP-208ENST00000549550 STRNO43815 780 aa18.8■□□□□ 0.6
TCHP-208ENST00000549550 MYCNP04198 464 aaPredicted RBP18.8■□□□□ 0.6
TCHP-208ENST00000549550 TRIM60Q495X7 471 aa18.8■□□□□ 0.6
TCHP-208ENST00000549550 BADQ92934 168 aa18.8■□□□□ 0.6
TCHP-208ENST00000549550 CCDC136Q96JN2 1154 aa18.8■□□□□ 0.6
TCHP-208ENST00000549550 CRBNQ96SW2 442 aa18.8■□□□□ 0.6
TCHP-208ENST00000549550 CCDC8Q9H0W5 538 aaPredicted RBP18.8■□□□□ 0.6
TCHP-208ENST00000549550 SEPT4O43236 478 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 ATP8B2P98198 1209 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 COG2Q14746 738 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 SEPT2Q15019 361 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 SNX17Q15036 470 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 TMEM57Q8N5G2 664 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 TANGO6Q9C0B7 1094 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 SPATC1LQ9H0A9 340 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 ANTXR1Q9H6X2 564 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 PDLIM7Q9NR12 457 aa18.79■□□□□ 0.6
TCHP-208ENST00000549550 A0A1W2PRG0 241 aa18.78■□□□□ 0.6
TCHP-208ENST00000549550 COBLO75128 1261 aa18.78■□□□□ 0.6
TCHP-208ENST00000549550 ERCC3P19447 782 aa18.78■□□□□ 0.6
TCHP-208ENST00000549550 ADCYAP1R1P41586 468 aa18.78■□□□□ 0.6
TCHP-208ENST00000549550 MAP3K12Q12852 859 aa18.78■□□□□ 0.6
TCHP-208ENST00000549550 MYLIPQ8WY64 445 aa18.78■□□□□ 0.6
TCHP-208ENST00000549550 EAF2Q96CJ1 260 aaPredicted RBP18.78■□□□□ 0.6
TCHP-208ENST00000549550 TTYH1Q9H313 450 aaPredicted RBP18.78■□□□□ 0.6
TCHP-208ENST00000549550 C1orf115Q9H7X2 142 aa18.78■□□□□ 0.6
TCHP-208ENST00000549550 HOXC10Q9NYD6 342 aa18.78■□□□□ 0.6
TCHP-208ENST00000549550 DDX19BQ9UMR2 479 aa18.78■□□□□ 0.6
TCHP-208ENST00000549550 MPHOSPH10O00566 681 aaKnown RBP18.77■□□□□ 0.6
TCHP-208ENST00000549550 POLR3DP05423 398 aaPredicted RBP18.77■□□□□ 0.6
TCHP-208ENST00000549550 SMAD3P84022 425 aaKnown RBP18.77■□□□□ 0.6
TCHP-208ENST00000549550 PRAMEF19Q5SWL8 479 aa18.77■□□□□ 0.6
TCHP-208ENST00000549550 C20orf194Q5TEA3 1177 aa18.77■□□□□ 0.6
TCHP-208ENST00000549550 SH3RF1Q7Z6J0 888 aa18.77■□□□□ 0.6
TCHP-208ENST00000549550 SHCBP1Q8NEM2 672 aa18.77■□□□□ 0.6
TCHP-208ENST00000549550 FERMT2Q96AC1 680 aa18.77■□□□□ 0.6
TCHP-208ENST00000549550 RIOK1Q9BRS2 568 aaKnown RBP18.77■□□□□ 0.6
TCHP-208ENST00000549550 NOP58Q9Y2X3 529 aaKnown RBP18.77■□□□□ 0.6
TCHP-208ENST00000549550 BAZ2AQ9UIF9 1905 aaKnown RBP18.76■□□□□ 0.59
TCHP-208ENST00000549550 TRIM43BA6NCK2 446 aa18.76■□□□□ 0.59
TCHP-208ENST00000549550 EVX2Q03828 476 aa18.76■□□□□ 0.59
TCHP-208ENST00000549550 GABPAQ06546 454 aa18.76■□□□□ 0.59
TCHP-208ENST00000549550 LRRC41Q15345 812 aa18.76■□□□□ 0.59
TCHP-208ENST00000549550 FAM47AQ5JRC9 791 aa18.76■□□□□ 0.59
TCHP-208ENST00000549550 TRIM43Q96BQ3 446 aaPredicted RBP18.76■□□□□ 0.59
TCHP-208ENST00000549550 SLC5A4Q9NY91 659 aa18.76■□□□□ 0.59
TCHP-208ENST00000549550 TTC28Q96AY4 2481 aa18.75■□□□□ 0.59
TCHP-208ENST00000549550 PLS1Q14651 629 aa18.75■□□□□ 0.59
TCHP-208ENST00000549550 KIAA1755Q5JYT7 1200 aa18.75■□□□□ 0.59
TCHP-208ENST00000549550 C1orf53Q5VUE5 145 aa18.75■□□□□ 0.59
TCHP-208ENST00000549550 TMED8Q6PL24 325 aaPredicted RBP18.75■□□□□ 0.59
TCHP-208ENST00000549550 NCAPG2Q86XI2 1143 aa18.75■□□□□ 0.59
TCHP-208ENST00000549550 MB21D1Q8N884 522 aa18.75■□□□□ 0.59
TCHP-208ENST00000549550 MROH8Q9H579 483 aa18.75■□□□□ 0.59
TCHP-208ENST00000549550 MUC3AQ02505 3323 aa18.75■□□□□ 0.59
TCHP-208ENST00000549550 MAGEB6P1A0A0J9YX57 407 aa18.74■□□□□ 0.59
TCHP-208ENST00000549550 FOSL2P15408 326 aa18.74■□□□□ 0.59
TCHP-208ENST00000549550 ABRAQ8N0Z2 381 aa18.74■□□□□ 0.59
TCHP-208ENST00000549550 MAML3Q96JK9 1138 aa18.74■□□□□ 0.59
TCHP-208ENST00000549550 MCM9Q9NXL9 1143 aa18.74■□□□□ 0.59
TCHP-208ENST00000549550 ITGB8P26012 769 aa18.73■□□□□ 0.59
TCHP-208ENST00000549550 TLE2Q04725 743 aa18.73■□□□□ 0.59
TCHP-208ENST00000549550 PANK1Q8TE04 598 aa18.73■□□□□ 0.59
TCHP-208ENST00000549550 CRNKL1Q9BZJ0 848 aaKnown RBP18.73■□□□□ 0.59
TCHP-208ENST00000549550 FLOT1O75955 427 aa18.72■□□□□ 0.59
TCHP-208ENST00000549550 FCER1AP12319 257 aa18.72■□□□□ 0.59
TCHP-208ENST00000549550 DSG3P32926 999 aa18.72■□□□□ 0.59
TCHP-208ENST00000549550 TMEM179Q6ZVK1 233 aa18.72■□□□□ 0.59
TCHP-208ENST00000549550 ATG4CQ96DT6 458 aa18.72■□□□□ 0.59
TCHP-208ENST00000549550 RNPC3Q96LT9 517 aaKnown RBP18.72■□□□□ 0.59
TCHP-208ENST00000549550 PHF24Q9UPV7 400 aa18.72■□□□□ 0.59
TCHP-208ENST00000549550 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
TCHP-208ENST00000549550 CLTBP09497 229 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms