RNA–Protein interactions for RNA: ENST00000548664.1

VDR-205, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-205ENST00000548664 SSH3Q8TE77 659 aa20.6■□□□□ 0.89
VDR-205ENST00000548664 BADQ92934 168 aa20.6■□□□□ 0.89
VDR-205ENST00000548664 MOV10L1Q9BXT6 1211 aaKnown RBP20.6■□□□□ 0.89
VDR-205ENST00000548664 TTYH1Q9H313 450 aaPredicted RBP20.6■□□□□ 0.89
VDR-205ENST00000548664 CABP5Q9NP86 173 aa20.6■□□□□ 0.89
VDR-205ENST00000548664 PDLIM7Q9NR12 457 aa20.6■□□□□ 0.89
VDR-205ENST00000548664 SMCHD1A6NHR9 2005 aa20.6■□□□□ 0.89
VDR-205ENST00000548664 STRNO43815 780 aa20.59■□□□□ 0.89
VDR-205ENST00000548664 PLCD1P51178 756 aa20.59■□□□□ 0.89
VDR-205ENST00000548664 SMAD3P84022 425 aaKnown RBP20.59■□□□□ 0.89
VDR-205ENST00000548664 CLUAP1Q96AJ1 413 aa20.59■□□□□ 0.89
VDR-205ENST00000548664 SURF6O75683 361 aaKnown RBP20.58■□□□□ 0.89
VDR-205ENST00000548664 COG2Q14746 738 aa20.58■□□□□ 0.89
VDR-205ENST00000548664 SEPT2Q15019 361 aa20.58■□□□□ 0.89
VDR-205ENST00000548664 MYLIPQ8WY64 445 aa20.58■□□□□ 0.89
VDR-205ENST00000548664 FRAT1Q92837 279 aaPredicted RBP20.58■□□□□ 0.89
VDR-205ENST00000548664 SPATC1LQ9H0A9 340 aa20.58■□□□□ 0.89
VDR-205ENST00000548664 A0A1W2PRG0 241 aa20.57■□□□□ 0.88
VDR-205ENST00000548664 TRIM43BA6NCK2 446 aa20.57■□□□□ 0.88
VDR-205ENST00000548664 COBLO75128 1261 aa20.57■□□□□ 0.88
VDR-205ENST00000548664 ERCC3P19447 782 aa20.57■□□□□ 0.88
VDR-205ENST00000548664 ATP8B2P98198 1209 aa20.57■□□□□ 0.88
VDR-205ENST00000548664 C1orf53Q5VUE5 145 aa20.57■□□□□ 0.88
VDR-205ENST00000548664 SH3RF1Q7Z6J0 888 aa20.57■□□□□ 0.88
VDR-205ENST00000548664 SHCBP1Q8NEM2 672 aa20.57■□□□□ 0.88
VDR-205ENST00000548664 TRIM43Q96BQ3 446 aaPredicted RBP20.57■□□□□ 0.88
VDR-205ENST00000548664 ANTXR1Q9H6X2 564 aa20.57■□□□□ 0.88
VDR-205ENST00000548664 BCAR3O75815 825 aa20.56■□□□□ 0.88
VDR-205ENST00000548664 MYCNP04198 464 aaPredicted RBP20.56■□□□□ 0.88
VDR-205ENST00000548664 ADCYAP1R1P41586 468 aa20.56■□□□□ 0.88
VDR-205ENST00000548664 GABPAQ06546 454 aa20.56■□□□□ 0.88
VDR-205ENST00000548664 LRRC41Q15345 812 aa20.56■□□□□ 0.88
VDR-205ENST00000548664 TMEM57Q8N5G2 664 aa20.56■□□□□ 0.88
VDR-205ENST00000548664 EAF2Q96CJ1 260 aaPredicted RBP20.56■□□□□ 0.88
VDR-205ENST00000548664 RIOK1Q9BRS2 568 aaKnown RBP20.56■□□□□ 0.88
VDR-205ENST00000548664 TANGO6Q9C0B7 1094 aa20.56■□□□□ 0.88
VDR-205ENST00000548664 CCDC8Q9H0W5 538 aaPredicted RBP20.56■□□□□ 0.88
VDR-205ENST00000548664 HOXC10Q9NYD6 342 aa20.56■□□□□ 0.88
VDR-205ENST00000548664 FAM47AQ5JRC9 791 aa20.55■□□□□ 0.88
VDR-205ENST00000548664 PRAMEF19Q5SWL8 479 aa20.55■□□□□ 0.88
VDR-205ENST00000548664 TMED8Q6PL24 325 aaPredicted RBP20.55■□□□□ 0.88
VDR-205ENST00000548664 FERMT2Q96AC1 680 aa20.55■□□□□ 0.88
VDR-205ENST00000548664 NOP58Q9Y2X3 529 aaKnown RBP20.55■□□□□ 0.88
VDR-205ENST00000548664 MUC3AQ02505 3323 aa20.55■□□□□ 0.88
VDR-205ENST00000548664 FOSL2P15408 326 aa20.54■□□□□ 0.88
VDR-205ENST00000548664 EVX2Q03828 476 aa20.54■□□□□ 0.88
VDR-205ENST00000548664 MAP3K12Q12852 859 aa20.54■□□□□ 0.88
VDR-205ENST00000548664 ABRAQ8N0Z2 381 aa20.54■□□□□ 0.88
VDR-205ENST00000548664 MAML3Q96JK9 1138 aa20.54■□□□□ 0.88
VDR-205ENST00000548664 PRDM6Q9NQX0 595 aa20.54■□□□□ 0.88
VDR-205ENST00000548664 SLC5A4Q9NY91 659 aa20.54■□□□□ 0.88
VDR-205ENST00000548664 POLR3DP05423 398 aaPredicted RBP20.53■□□□□ 0.88
VDR-205ENST00000548664 ITGB8P26012 769 aa20.53■□□□□ 0.88
VDR-205ENST00000548664 KIAA1755Q5JYT7 1200 aa20.53■□□□□ 0.88
VDR-205ENST00000548664 MB21D1Q8N884 522 aa20.53■□□□□ 0.88
VDR-205ENST00000548664 MROH8Q9H579 483 aa20.53■□□□□ 0.88
VDR-205ENST00000548664 C1orf115Q9H7X2 142 aa20.53■□□□□ 0.88
VDR-205ENST00000548664 BAZ2AQ9UIF9 1905 aaKnown RBP20.53■□□□□ 0.88
VDR-205ENST00000548664 TMEM265A0A087WTH1 108 aa20.52■□□□□ 0.88
VDR-205ENST00000548664 MPHOSPH10O00566 681 aaKnown RBP20.52■□□□□ 0.88
VDR-205ENST00000548664 TLE2Q04725 743 aa20.52■□□□□ 0.88
VDR-205ENST00000548664 NCAPG2Q86XI2 1143 aa20.52■□□□□ 0.88
VDR-205ENST00000548664 PHF24Q9UPV7 400 aa20.52■□□□□ 0.88
VDR-205ENST00000548664 DSG3P32926 999 aa20.51■□□□□ 0.87
VDR-205ENST00000548664 EPHB4P54760 987 aa20.51■□□□□ 0.87
VDR-205ENST00000548664 PLS1Q14651 629 aa20.51■□□□□ 0.87
VDR-205ENST00000548664 RNPC3Q96LT9 517 aaKnown RBP20.51■□□□□ 0.87
VDR-205ENST00000548664 TACC3Q9Y6A5 838 aa20.51■□□□□ 0.87
VDR-205ENST00000548664 ROBO3Q96MS0 1386 aa20.5■□□□□ 0.87
VDR-205ENST00000548664 MAGEB6P1A0A0J9YX57 407 aa20.5■□□□□ 0.87
VDR-205ENST00000548664 FLOT1O75955 427 aa20.5■□□□□ 0.87
VDR-205ENST00000548664 CLTBP09497 229 aa20.5■□□□□ 0.87
VDR-205ENST00000548664 TMEM179Q6ZVK1 233 aa20.5■□□□□ 0.87
VDR-205ENST00000548664 ATG4CQ96DT6 458 aa20.5■□□□□ 0.87
VDR-205ENST00000548664 XPNPEP3Q9NQH7 507 aa20.5■□□□□ 0.87
VDR-205ENST00000548664 MCM9Q9NXL9 1143 aa20.5■□□□□ 0.87
VDR-205ENST00000548664 FCER1AP12319 257 aa20.49■□□□□ 0.87
VDR-205ENST00000548664 ZKSCAN2Q63HK3 967 aa20.49■□□□□ 0.87
VDR-205ENST00000548664 SYMPKQ92797 1274 aaKnown RBP20.49■□□□□ 0.87
VDR-205ENST00000548664 NRBP1Q9UHY1 535 aa20.49■□□□□ 0.87
VDR-205ENST00000548664 KIAA0355O15063 1070 aa20.48■□□□□ 0.87
VDR-205ENST00000548664 RARBP10826 455 aa20.48■□□□□ 0.87
VDR-205ENST00000548664 CLEC10AQ8IUN9 316 aa20.48■□□□□ 0.87
VDR-205ENST00000548664 SIAH1Q8IUQ4 282 aa20.48■□□□□ 0.87
VDR-205ENST00000548664 SPICE1Q8N0Z3 855 aa20.48■□□□□ 0.87
VDR-205ENST00000548664 SLC44A5Q8NCS7 719 aa20.48■□□□□ 0.87
VDR-205ENST00000548664 CRNKL1Q9BZJ0 848 aaKnown RBP20.48■□□□□ 0.87
VDR-205ENST00000548664 A0A1W2PQ45 241 aaPredicted RBP20.47■□□□□ 0.87
VDR-205ENST00000548664 A0A1W2PQY0 241 aa20.47■□□□□ 0.87
VDR-205ENST00000548664 PGK1P00558 417 aa20.47■□□□□ 0.87
VDR-205ENST00000548664 TMEM132BQ14DG7 1078 aa20.47■□□□□ 0.87
VDR-205ENST00000548664 RNF180Q86T96 592 aa20.47■□□□□ 0.87
VDR-205ENST00000548664 SDR42E1Q8WUS8 393 aa20.47■□□□□ 0.87
VDR-205ENST00000548664 DCP1AQ9NPI6 582 aaPredicted RBP20.47■□□□□ 0.87
VDR-205ENST00000548664 TMX2Q9Y320 296 aa20.47■□□□□ 0.87
VDR-205ENST00000548664 CYP2D6P10635 497 aa20.46■□□□□ 0.87
VDR-205ENST00000548664 RAG1P15918 1043 aa20.46■□□□□ 0.87
VDR-205ENST00000548664 PDE6AP16499 860 aa20.46■□□□□ 0.87
VDR-205ENST00000548664 FPGSQ05932 587 aa20.46■□□□□ 0.87
VDR-205ENST00000548664 GRIN2CQ14957 1233 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms