RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 MCM9Q9NXL9 1143 aa19.99■□□□□ 0.79
SSH1-208ENST00000548522 IVNS1ABPQ9Y6Y0 642 aa19.99■□□□□ 0.79
SSH1-208ENST00000548522 SMIM22K7EJ46 135 aa19.98■□□□□ 0.79
SSH1-208ENST00000548522 CYBAP13498 195 aa19.98■□□□□ 0.79
SSH1-208ENST00000548522 HNRNPUQ00839 825 aaKnown RBP eCLIP19.98■□□□□ 0.79
SSH1-208ENST00000548522 SLC9C2Q5TAH2 1124 aa19.98■□□□□ 0.79
SSH1-208ENST00000548522 ANO1Q5XXA6 986 aa19.98■□□□□ 0.79
SSH1-208ENST00000548522 LPAR1Q92633 364 aa19.98■□□□□ 0.79
SSH1-208ENST00000548522 TANGO6Q9C0B7 1094 aa19.98■□□□□ 0.79
SSH1-208ENST00000548522 STXBP5LQ9Y2K9 1186 aa19.98■□□□□ 0.79
SSH1-208ENST00000548522 A0A0G2JMZ2 1700 aa19.98■□□□□ 0.79
SSH1-208ENST00000548522 ZNF532Q9HCE3 1301 aa19.98■□□□□ 0.79
SSH1-208ENST00000548522 TCRBV5S4A2TA0A5A2 114 aa19.97■□□□□ 0.79
SSH1-208ENST00000548522 APBB1O00213 710 aa19.97■□□□□ 0.79
SSH1-208ENST00000548522 GOLIM4O00461 696 aa19.97■□□□□ 0.79
SSH1-208ENST00000548522 ADORA2AP29274 412 aa19.97■□□□□ 0.79
SSH1-208ENST00000548522 ERC1Q8IUD2 1116 aa19.97■□□□□ 0.79
SSH1-208ENST00000548522 DYNLL2Q96FJ2 89 aa19.97■□□□□ 0.79
SSH1-208ENST00000548522 DNAJC2Q99543 621 aaKnown RBP19.97■□□□□ 0.79
SSH1-208ENST00000548522 CRNKL1Q9BZJ0 848 aaKnown RBP19.97■□□□□ 0.79
SSH1-208ENST00000548522 BCL11AQ9H165 835 aa19.97■□□□□ 0.79
SSH1-208ENST00000548522 DNM1LO00429 736 aa19.96■□□□□ 0.79
SSH1-208ENST00000548522 GJC2Q5T442 439 aaPredicted RBP19.96■□□□□ 0.79
SSH1-208ENST00000548522 RHPN1Q8TCX5 695 aa19.96■□□□□ 0.79
SSH1-208ENST00000548522 SPATC1LQ9H0A9 340 aa19.96■□□□□ 0.79
SSH1-208ENST00000548522 DCP1AQ9NPI6 582 aaPredicted RBP19.96■□□□□ 0.79
SSH1-208ENST00000548522 ZNF236Q9UL36 1845 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 PRKAB2O43741 272 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 COBLO75128 1261 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 CHGBP05060 677 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 ERCC3P19447 782 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 RTP1P59025 263 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 SIAH1Q8IUQ4 282 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 SPICE1Q8N0Z3 855 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 ARMT1Q9H993 441 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 RLFQ13129 1914 aa19.95■□□□□ 0.78
SSH1-208ENST00000548522 SPTBN5Q9NRC6 3674 aaKnown RBP19.95■□□□□ 0.78
SSH1-208ENST00000548522 CYP2D7A0A087X1C5 515 aa19.94■□□□□ 0.78
SSH1-208ENST00000548522 MSCO60682 206 aa19.94■□□□□ 0.78
SSH1-208ENST00000548522 AKR1B1P15121 316 aa19.94■□□□□ 0.78
SSH1-208ENST00000548522 COG2Q14746 738 aa19.94■□□□□ 0.78
SSH1-208ENST00000548522 TMED8Q6PL24 325 aaPredicted RBP19.94■□□□□ 0.78
SSH1-208ENST00000548522 DPP9Q86TI2 863 aa19.94■□□□□ 0.78
SSH1-208ENST00000548522 ATG4CQ96DT6 458 aa19.94■□□□□ 0.78
SSH1-208ENST00000548522 GUCD1Q96NT3 240 aa19.94■□□□□ 0.78
SSH1-208ENST00000548522 TTF1Q15361 905 aaPredicted RBP19.93■□□□□ 0.78
SSH1-208ENST00000548522 PRAMEF19Q5SWL8 479 aa19.93■□□□□ 0.78
SSH1-208ENST00000548522 OLFML2BQ68BL8 750 aa19.93■□□□□ 0.78
SSH1-208ENST00000548522 FAM161BQ96MY7 647 aa19.93■□□□□ 0.78
SSH1-208ENST00000548522 LBHD1Q9BQE6 289 aaPredicted RBP19.93■□□□□ 0.78
SSH1-208ENST00000548522 ATP11BQ9Y2G3 1177 aa19.93■□□□□ 0.78
SSH1-208ENST00000548522 LTBP2Q14767 1821 aa19.92■□□□□ 0.78
SSH1-208ENST00000548522 MYCNP04198 464 aaPredicted RBP19.92■□□□□ 0.78
SSH1-208ENST00000548522 PLS1Q14651 629 aa19.92■□□□□ 0.78
SSH1-208ENST00000548522 SAMD1Q6SPF0 538 aaPredicted RBP19.92■□□□□ 0.78
SSH1-208ENST00000548522 TMEM179Q6ZVK1 233 aa19.92■□□□□ 0.78
SSH1-208ENST00000548522 PRUNE2Q8WUY3 3088 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 POTEB2H3BUK9 544 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 FLOT1O75955 427 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 MBD4O95243 580 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 DSG3P32926 999 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 ICA1Q05084 483 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 NCAPG2Q86XI2 1143 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 SIRT2Q8IXJ6 389 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 SHCBP1Q8NEM2 672 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 HOXC10Q9NYD6 342 aa19.91■□□□□ 0.78
SSH1-208ENST00000548522 SEPT4O43236 478 aa19.9■□□□□ 0.78
SSH1-208ENST00000548522 TRIM60Q495X7 471 aa19.9■□□□□ 0.78
SSH1-208ENST00000548522 FAM47AQ5JRC9 791 aa19.9■□□□□ 0.78
SSH1-208ENST00000548522 CLASRPQ8N2M8 674 aaKnown RBP19.9■□□□□ 0.78
SSH1-208ENST00000548522 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.9■□□□□ 0.78
SSH1-208ENST00000548522 PRDM5Q9NQX1 630 aaPredicted RBP19.9■□□□□ 0.78
SSH1-208ENST00000548522 STRNO43815 780 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 IFIT2P09913 472 aaKnown RBP19.89■□□□□ 0.77
SSH1-208ENST00000548522 ADD2P35612 726 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 TMEM132BQ14DG7 1078 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 HSP90AB4PQ58FF6 505 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 C9orf50Q5SZB4 431 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 SLC39A5Q6ZMH5 540 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 FERMT2Q96AC1 680 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 KIF1BPQ96EK5 621 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 MAML3Q96JK9 1138 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 YTHDC1Q96MU7 727 aaKnown RBP19.89■□□□□ 0.77
SSH1-208ENST00000548522 VCPKMTQ9H867 229 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 FBXO28Q9NVF7 368 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 SWAP70Q9UH65 585 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 TMX2Q9Y320 296 aa19.89■□□□□ 0.77
SSH1-208ENST00000548522 KBTBD13C9JR72 458 aa19.88■□□□□ 0.77
SSH1-208ENST00000548522 SH3RF1Q7Z6J0 888 aa19.88■□□□□ 0.77
SSH1-208ENST00000548522 MB21D1Q8N884 522 aa19.88■□□□□ 0.77
SSH1-208ENST00000548522 ARRDC4Q8NCT1 418 aa19.88■□□□□ 0.77
SSH1-208ENST00000548522 BOLA2Q9H3K6 86 aa19.88■□□□□ 0.77
SSH1-208ENST00000548522 MROH8Q9H579 483 aa19.88■□□□□ 0.77
SSH1-208ENST00000548522 PAG1Q9NWQ8 432 aa19.88■□□□□ 0.77
SSH1-208ENST00000548522 PRKAG2Q9UGJ0 569 aa19.88■□□□□ 0.77
SSH1-208ENST00000548522 PGK2P07205 417 aa19.87■□□□□ 0.77
SSH1-208ENST00000548522 ADCYAP1R1P41586 468 aa19.87■□□□□ 0.77
SSH1-208ENST00000548522 SNX17Q15036 470 aa19.87■□□□□ 0.77
SSH1-208ENST00000548522 LRRC41Q15345 812 aa19.87■□□□□ 0.77
SSH1-208ENST00000548522 SHHQ15465 462 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms