RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 ATN1P54259 1190 aaPredicted RBP24.29■■□□□ 1.48
GATC-202ENST00000548171 CEP85Q6P2H3 762 aa24.29■■□□□ 1.48
GATC-202ENST00000548171 MB21D1Q8N884 522 aa24.29■■□□□ 1.48
GATC-202ENST00000548171 TRPV1Q8NER1 839 aa24.29■■□□□ 1.48
GATC-202ENST00000548171 MOV10L1Q9BXT6 1211 aaKnown RBP24.29■■□□□ 1.48
GATC-202ENST00000548171 SLC5A4Q9NY91 659 aa24.29■■□□□ 1.48
GATC-202ENST00000548171 ADORA2AP29274 412 aa24.28■■□□□ 1.48
GATC-202ENST00000548171 RTP1P59025 263 aa24.28■■□□□ 1.48
GATC-202ENST00000548171 HSP90AB4PQ58FF6 505 aa24.28■■□□□ 1.48
GATC-202ENST00000548171 SLC9C2Q5TAH2 1124 aa24.28■■□□□ 1.48
GATC-202ENST00000548171 TANGO6Q9C0B7 1094 aa24.28■■□□□ 1.48
GATC-202ENST00000548171 SPATC1LQ9H0A9 340 aa24.28■■□□□ 1.48
GATC-202ENST00000548171 MCM9Q9NXL9 1143 aa24.28■■□□□ 1.48
GATC-202ENST00000548171 A0A1W2PRG0 241 aa24.27■■□□□ 1.48
GATC-202ENST00000548171 MPHOSPH10O00566 681 aaKnown RBP24.27■■□□□ 1.48
GATC-202ENST00000548171 RLBP1P12271 317 aa24.27■■□□□ 1.48
GATC-202ENST00000548171 PDE6AP16499 860 aa24.27■■□□□ 1.48
GATC-202ENST00000548171 TMEM179Q6ZVK1 233 aa24.27■■□□□ 1.48
GATC-202ENST00000548171 MROH8Q9H579 483 aa24.27■■□□□ 1.48
GATC-202ENST00000548171 EXOC6BQ9Y2D4 811 aa24.27■■□□□ 1.48
GATC-202ENST00000548171 DNAH12Q6ZR08 3092 aa24.26■■□□□ 1.47
GATC-202ENST00000548171 KBTBD13C9JR72 458 aa24.26■■□□□ 1.47
GATC-202ENST00000548171 SEPT4O43236 478 aa24.26■■□□□ 1.47
GATC-202ENST00000548171 ERCC3P19447 782 aa24.26■■□□□ 1.47
GATC-202ENST00000548171 ABRAQ8N0Z2 381 aa24.26■■□□□ 1.47
GATC-202ENST00000548171 GJC2Q5T442 439 aaPredicted RBP24.25■■□□□ 1.47
GATC-202ENST00000548171 SH2D4AQ9H788 454 aa24.25■■□□□ 1.47
GATC-202ENST00000548171 SWAP70Q9UH65 585 aa24.25■■□□□ 1.47
GATC-202ENST00000548171 BAZ2AQ9UIF9 1905 aaKnown RBP24.25■■□□□ 1.47
GATC-202ENST00000548171 COL11A1P12107 1806 aaPredicted RBP24.24■■□□□ 1.47
GATC-202ENST00000548171 SNX17Q15036 470 aa24.24■■□□□ 1.47
GATC-202ENST00000548171 SLC39A5Q6ZMH5 540 aa24.24■■□□□ 1.47
GATC-202ENST00000548171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.24■■□□□ 1.47
GATC-202ENST00000548171 GUCD1Q96NT3 240 aa24.24■■□□□ 1.47
GATC-202ENST00000548171 DCP1AQ9NPI6 582 aaPredicted RBP24.24■■□□□ 1.47
GATC-202ENST00000548171 ATP11BQ9Y2G3 1177 aa24.24■■□□□ 1.47
GATC-202ENST00000548171 SMCHD1A6NHR9 2005 aa24.23■■□□□ 1.47
GATC-202ENST00000548171 ZNF697Q5TEC3 545 aa24.23■■□□□ 1.47
GATC-202ENST00000548171 RHPN1Q8TCX5 695 aa24.23■■□□□ 1.47
GATC-202ENST00000548171 ARHGEF10LQ9HCE6 1279 aa24.23■■□□□ 1.47
GATC-202ENST00000548171 ZNF532Q9HCE3 1301 aa24.23■■□□□ 1.47
GATC-202ENST00000548171 PLXNA1Q9UIW2 1896 aa24.23■■□□□ 1.47
GATC-202ENST00000548171 COBLO75128 1261 aa24.22■■□□□ 1.47
GATC-202ENST00000548171 DSG3P32926 999 aa24.22■■□□□ 1.47
GATC-202ENST00000548171 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.22■■□□□ 1.47
GATC-202ENST00000548171 CLASRPQ8N2M8 674 aaKnown RBP24.22■■□□□ 1.47
GATC-202ENST00000548171 IL1RAPL2Q9NP60 686 aa24.22■■□□□ 1.47
GATC-202ENST00000548171 MYH7P12883 1935 aa24.22■■□□□ 1.47
GATC-202ENST00000548171 FLOT1O75955 427 aa24.21■■□□□ 1.47
GATC-202ENST00000548171 C1orf53Q5VUE5 145 aa24.21■■□□□ 1.47
GATC-202ENST00000548171 NCAPG2Q86XI2 1143 aa24.21■■□□□ 1.47
GATC-202ENST00000548171 SDR42E1Q8WUS8 393 aa24.21■■□□□ 1.47
GATC-202ENST00000548171 NRBP1Q9UHY1 535 aa24.21■■□□□ 1.47
GATC-202ENST00000548171 TMX2Q9Y320 296 aa24.21■■□□□ 1.47
GATC-202ENST00000548171 TCRBV5S4A2TA0A5A2 114 aa24.2■■□□□ 1.46
GATC-202ENST00000548171 EVX2Q03828 476 aa24.2■■□□□ 1.46
GATC-202ENST00000548171 PLS1Q14651 629 aa24.2■■□□□ 1.46
GATC-202ENST00000548171 LCORLQ8N3X6 602 aa24.2■■□□□ 1.46
GATC-202ENST00000548171 CCDC17Q96LX7 622 aa24.2■■□□□ 1.46
GATC-202ENST00000548171 VCPKMTQ9H867 229 aa24.2■■□□□ 1.46
GATC-202ENST00000548171 GOLIM4O00461 696 aa24.19■■□□□ 1.46
GATC-202ENST00000548171 SLC25A27O95847 323 aa24.19■■□□□ 1.46
GATC-202ENST00000548171 FCER1AP12319 257 aa24.19■■□□□ 1.46
GATC-202ENST00000548171 ICA1Q05084 483 aa24.19■■□□□ 1.46
GATC-202ENST00000548171 TRIM60Q495X7 471 aa24.19■■□□□ 1.46
GATC-202ENST00000548171 KIAA1755Q5JYT7 1200 aa24.19■■□□□ 1.46
GATC-202ENST00000548171 SLC44A5Q8NCS7 719 aa24.19■■□□□ 1.46
GATC-202ENST00000548171 MAML3Q96JK9 1138 aa24.19■■□□□ 1.46
GATC-202ENST00000548171 DNAJC2Q99543 621 aaKnown RBP24.19■■□□□ 1.46
GATC-202ENST00000548171 PRDM5Q9NQX1 630 aaPredicted RBP24.19■■□□□ 1.46
GATC-202ENST00000548171 ATP8A2Q9NTI2 1148 aa24.19■■□□□ 1.46
GATC-202ENST00000548171 WDR46O15213 610 aaKnown RBP24.18■■□□□ 1.46
GATC-202ENST00000548171 LRRC41Q15345 812 aa24.18■■□□□ 1.46
GATC-202ENST00000548171 SHHQ15465 462 aa24.18■■□□□ 1.46
GATC-202ENST00000548171 ANO1Q5XXA6 986 aa24.18■■□□□ 1.46
GATC-202ENST00000548171 SIAH1Q8IUQ4 282 aa24.18■■□□□ 1.46
GATC-202ENST00000548171 ATG4CQ96DT6 458 aa24.18■■□□□ 1.46
GATC-202ENST00000548171 KIF1BPQ96EK5 621 aa24.18■■□□□ 1.46
GATC-202ENST00000548171 FAM161BQ96MY7 647 aa24.18■■□□□ 1.46
GATC-202ENST00000548171 COL25A1Q9BXS0 654 aaPredicted RBP24.18■■□□□ 1.46
GATC-202ENST00000548171 MYCNP04198 464 aaPredicted RBP24.17■■□□□ 1.46
GATC-202ENST00000548171 IFIT2P09913 472 aaKnown RBP24.17■■□□□ 1.46
GATC-202ENST00000548171 CYP2D6P10635 497 aa24.17■■□□□ 1.46
GATC-202ENST00000548171 ADCYAP1R1P41586 468 aa24.17■■□□□ 1.46
GATC-202ENST00000548171 AMOTL1Q8IY63 956 aa24.17■■□□□ 1.46
GATC-202ENST00000548171 SPICE1Q8N0Z3 855 aa24.17■■□□□ 1.46
GATC-202ENST00000548171 BADQ92934 168 aa24.17■■□□□ 1.46
GATC-202ENST00000548171 PDLIM7Q9NR12 457 aa24.17■■□□□ 1.46
GATC-202ENST00000548171 UNC80Q8N2C7 3258 aa24.16■■□□□ 1.46
GATC-202ENST00000548171 AKR1B1P15121 316 aa24.16■■□□□ 1.46
GATC-202ENST00000548171 PRAMEF19Q5SWL8 479 aa24.16■■□□□ 1.46
GATC-202ENST00000548171 DYNLL2Q96FJ2 89 aa24.16■■□□□ 1.46
GATC-202ENST00000548171 ARMT1Q9H993 441 aa24.16■■□□□ 1.46
GATC-202ENST00000548171 ADAMTS5Q9UNA0 930 aa24.16■■□□□ 1.46
GATC-202ENST00000548171 PHF24Q9UPV7 400 aa24.16■■□□□ 1.46
GATC-202ENST00000548171 ROBO3Q96MS0 1386 aa24.16■■□□□ 1.46
GATC-202ENST00000548171 RARBP10826 455 aa24.15■■□□□ 1.46
GATC-202ENST00000548171 SMAD3P84022 425 aaKnown RBP24.15■■□□□ 1.46
GATC-202ENST00000548171 TMEM132BQ14DG7 1078 aa24.15■■□□□ 1.46
GATC-202ENST00000548171 FAM47AQ5JRC9 791 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms