RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PXYLP1Q8TE99 480 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 DEFB118Q96PH6 123 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 HAUS7Q99871 368 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 PAGR1Q9BTK6 254 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.1□□□□□ -1.11
SCAF11-211ENST00000547950 EHD4Q9H223 541 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 TXNRD2Q9NNW7 524 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 RBPJLQ9UBG7 517 aa8.1□□□□□ -1.11
SCAF11-211ENST00000547950 MYH2Q9UKX2 1941 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 MBD4O95243 580 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 SGPL1O95470 568 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 CHGBP05060 677 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 CYP2B6P20813 491 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 ADD2P35612 726 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 HERVK_113P62684 666 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 SEPT2Q15019 361 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 Q3C1V9 767 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 U2AF1L4Q8WU68 220 aaKnown RBP8.09□□□□□ -1.11
SCAF11-211ENST00000547950 SHISA4Q96DD7 197 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
SCAF11-211ENST00000547950 CWC22Q9HCG8 908 aaKnown RBP8.09□□□□□ -1.11
SCAF11-211ENST00000547950 DCP1AQ9NPI6 582 aaPredicted RBP8.09□□□□□ -1.11
SCAF11-211ENST00000547950 MORF4L1Q9UBU8 362 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 GJD2Q9UKL4 321 aa8.09□□□□□ -1.11
SCAF11-211ENST00000547950 AK9Q5TCS8 1911 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 MYH13Q9UKX3 1938 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 CYP2D7A0A087X1C5 515 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 H0YGN5 161 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 GUCY1A2P33402 732 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 USP14P54578 494 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 GABPAQ06546 454 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 TRIM32Q13049 653 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 CATSPERGQ6ZRH7 1159 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 SLC44A5Q8NCS7 719 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 GCC1Q96CN9 775 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 DYNLL2Q96FJ2 89 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 KCNK17Q96T54 332 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 KIAA1683Q9H0B3 1180 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 ATP8A2Q9NTI2 1148 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 ECHDC1Q9NTX5 307 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 SLC4A4Q9Y6R1 1079 aa8.08□□□□□ -1.12
SCAF11-211ENST00000547950 HTTP42858 3142 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 A0A1W2PRG0 241 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 USP17L12C9JPN9 530 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 USP17L21D6R901 530 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 SMIM22K7EJ46 135 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 FARP2O94887 1054 aaPredicted RBP8.07□□□□□ -1.12
SCAF11-211ENST00000547950 HMGCRP04035 888 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 VCAM1P19320 739 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 MAPK4P31152 587 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 ERVK-9P63128 1117 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 ERVK-24P63145 666 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 UBE3CQ15386 1083 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 HABP4Q5JVS0 413 aaKnown RBP8.07□□□□□ -1.12
SCAF11-211ENST00000547950 WDR78Q5VTH9 848 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 TSHZ3Q63HK5 1081 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 ZSCAN25Q6NSZ9 544 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 PLEKHH3Q7Z736 793 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 AMOTL1Q8IY63 956 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 ZNF454Q8N9F8 522 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 GPATCH3Q96I76 525 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 C12orf42Q96LP6 360 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 PUS7LQ9H0K6 701 aaKnown RBP8.07□□□□□ -1.12
SCAF11-211ENST00000547950 PORCNQ9H237 461 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 RPAP3Q9H6T3 665 aaPredicted RBP8.07□□□□□ -1.12
SCAF11-211ENST00000547950 DCTPP1Q9H773 170 aa8.07□□□□□ -1.12
SCAF11-211ENST00000547950 HMX1Q9NP08 348 aaPredicted RBP8.07□□□□□ -1.12
SCAF11-211ENST00000547950 RPTORQ8N122 1335 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 AKR1B1P15121 316 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 CDK8P49336 464 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 CCNA1P78396 465 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 ATP2B2Q01814 1243 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 COG2Q14746 738 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 C12orf60Q5U649 245 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 GPR142Q7Z601 462 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 UBE2Q1Q7Z7E8 422 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 SPICE1Q8N0Z3 855 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 STK11IPQ8N1F8 1099 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 GTF3C2Q8WUA4 911 aaPredicted RBP8.06□□□□□ -1.12
SCAF11-211ENST00000547950 TRIB2Q92519 343 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 HTATIP2Q9BUP3 242 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 TANGO6Q9C0B7 1094 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.06□□□□□ -1.12
SCAF11-211ENST00000547950 PAK6Q9NQU5 681 aaPredicted RBP8.06□□□□□ -1.12
SCAF11-211ENST00000547950 SWAP70Q9UH65 585 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 RABGAP1Q9Y3P9 1069 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 PCDHB15Q9Y5E8 787 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 LAMB1P07942 1786 aa8.06□□□□□ -1.12
SCAF11-211ENST00000547950 ZSWIM8A7E2V4 1837 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms