RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 NAV1Q8NEY1 1877 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 IFIT3O14879 490 aaKnown RBP19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 HSPA8P11142 646 aaKnown RBP19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 ADD1P35611 737 aaKnown RBP19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 CTCFP49711 727 aaPredicted RBP19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 TCP10Q12799 353 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 C12orf60Q5U649 245 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 CDC42EP5Q6NZY7 148 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 ESR2Q92731 530 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 MRIQ9BWK5 157 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 NFIAQ12857 509 aa19.19■□□□□ 0.66
CHMP1A-204ENST00000547687 SUPT20HL1Q3ZLR7 823 aa19.19■□□□□ 0.66
CHMP1A-204ENST00000547687 TMOD2Q9NZR1 351 aa19.19■□□□□ 0.66
CHMP1A-204ENST00000547687 PPP1R12BO60237 982 aaPredicted RBP19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 USP2O75604 605 aaPredicted RBP19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 PCP11498 1178 aaKnown RBP19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 LIG1P18858 919 aa19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 METAP2P50579 478 aaKnown RBP eCLIP19.18■□□□□ 0.662e-6■■■■□ 22.8
CHMP1A-204ENST00000547687 ATL3Q6DD88 541 aa19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 NFXL1Q6ZNB6 911 aa19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 C8orf76Q96K31 380 aa19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 ZNF396Q96N95 335 aaPredicted RBP19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 RANBP6O60518 1105 aaKnown RBP19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 LIFRP42702 1097 aa19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 APOA5Q6Q788 366 aa19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 PGBD1Q96JS3 809 aa19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 CSRNP1Q96S65 589 aa19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 USP40Q9NVE5 1235 aa19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 SAP30BPQ9UHR5 308 aaKnown RBP19.18■□□□□ 0.66
CHMP1A-204ENST00000547687 SLC3A2P08195 630 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 TNNI2P48788 182 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 SART3Q15020 963 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 LDLRAD1Q5T700 205 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 SGMS1Q86VZ5 419 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 RCOR1Q9UKL0 485 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 FOCADQ5VW36 1801 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 FLT1P17948 1338 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 MYH1P12882 1939 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 ZBTB43O43298 467 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 ORC4O43929 436 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 PLCD1P51178 756 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 CEBPZQ03701 1054 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 ZFPM1Q8IX07 1006 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 MTA3Q9BTC8 594 aa19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 RRAGDQ9NQL2 400 aaPredicted RBP19.17■□□□□ 0.66
CHMP1A-204ENST00000547687 CDKL5O76039 1030 aa19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 POLR3DP05423 398 aaPredicted RBP19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 PDE4BQ07343 736 aa19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 WTAPQ15007 396 aa19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 OTUD7BQ6GQQ9 843 aa19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 CPLX2Q6PUV4 134 aaKnown RBP19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 AMOTL1Q8IY63 956 aa19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 FBXO18Q8NFZ0 1043 aa19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 DYNLL2Q96FJ2 89 aa19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 UBAC1Q9BSL1 405 aa19.16■□□□□ 0.66
CHMP1A-204ENST00000547687 ERICH2A1L162 156 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 TRPA1O75762 1119 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 RXRAP19793 462 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 MIGA2Q7L4E1 593 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 BICD2Q8TD16 824 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 PDLIM2Q96JY6 352 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 FUCA2Q9BTY2 467 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 NUP62CLQ9H1M0 184 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 DACT1Q9NYF0 836 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 TNKSO95271 1327 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 DDX60LQ5H9U9 1706 aaKnown RBP19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 CCDC69A6NI79 296 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 UVSSAQ2YD98 709 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 MICU3Q86XE3 530 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 SLC10A4Q96EP9 437 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 USP28Q96RU2 1077 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 MYL10Q9BUA6 226 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 FAM198AQ9UFP1 575 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 SLC12A7Q9Y666 1083 aa19.15■□□□□ 0.66
CHMP1A-204ENST00000547687 CDC27P30260 824 aa19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 IREB2P48200 963 aaKnown RBP19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 PICALMQ13492 652 aa19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 SEC23AQ15436 765 aa19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 MAP3K11Q16584 847 aa19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 FAM47AQ5JRC9 791 aa19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 RGS22Q8NE09 1264 aa19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 ZSCAN10Q96SZ4 725 aaPredicted RBP19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 ELP3Q9H9T3 547 aa19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 DDX19AQ9NUU7 478 aaKnown RBP19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 ROBO3Q96MS0 1386 aa19.14■□□□□ 0.65
CHMP1A-204ENST00000547687 GOLGA8AA7E2F4 631 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 WDHD1O75717 1129 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 SYNE3Q6ZMZ3 975 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 IQCA1Q86XH1 822 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 FTOQ9C0B1 505 aaKnown RBP eCLIP19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 DDX4Q9NQI0 724 aaKnown RBP19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 SLURP2P0DP57 97 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 CAMK4Q16566 473 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 FAM83AQ86UY5 434 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 CCDC144CPQ8IYA2 1237 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 TNS4Q8IZW8 715 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 TMTC2Q8N394 836 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 ENAHQ8N8S7 591 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms