RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 TFAP4Q01664 338 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 DGKHQ86XP1 1220 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 SH3RF3Q8TEJ3 882 aaPredicted RBP17.71■□□□□ 0.43
BRF1-212ENST00000547562 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 NFE2L3Q9Y4A8 694 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 ROBO3Q96MS0 1386 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 CDK5RAP2Q96SN8 1893 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 PSDA5PKW4 1024 aaPredicted RBP17.71■□□□□ 0.43
BRF1-212ENST00000547562 KIF2AO00139 706 aaPredicted RBP17.71■□□□□ 0.43
BRF1-212ENST00000547562 ZNF18P17022 549 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 NLRP5P59047 1200 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 GSTO1P78417 241 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 ATP2C1P98194 919 aaPredicted RBP17.71■□□□□ 0.43
BRF1-212ENST00000547562 FAM196AQ6ZSG2 479 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 ANKRD7Q92527 254 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 IL17RBQ9NRM6 502 aa17.71■□□□□ 0.43
BRF1-212ENST00000547562 TMEM232C9JQI7 657 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 TRAPPC10P48553 1259 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 PTGDRQ13258 359 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 SYCP1Q15431 976 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 ZNF804AQ7Z570 1209 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 SH3RF1Q7Z6J0 888 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 INTS13Q9NVM9 706 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 BAG3O95817 575 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 TOP1P11387 765 aaKnown RBP17.7■□□□□ 0.42
BRF1-212ENST00000547562 VEGFAP15692 232 aaPredicted RBP17.7■□□□□ 0.42
BRF1-212ENST00000547562 DIXDC1Q155Q3 683 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 GLIPR1L2Q4G1C9 344 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 ANKS1AQ92625 1134 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 PPP1R13BQ96KQ4 1090 aa17.7■□□□□ 0.42
BRF1-212ENST00000547562 ERCC5P28715 1186 aaPredicted RBP17.69■□□□□ 0.42
BRF1-212ENST00000547562 PLCD1P51178 756 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 PPP4CP60510 307 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 PIK3AP1Q6ZUJ8 805 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 C15orf52Q6ZUT6 534 aaKnown RBP17.69■□□□□ 0.42
BRF1-212ENST00000547562 PNMA1Q8ND90 353 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 DYNLL2Q96FJ2 89 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 PAGE5Q96GU1 130 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 VWA3AA6NCI4 1184 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 GRIK5Q16478 980 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 TRMT44Q8IYL2 757 aaKnown RBP17.69■□□□□ 0.42
BRF1-212ENST00000547562 MED15Q96RN5 788 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 TMX1Q9H3N1 280 aa17.69■□□□□ 0.42
BRF1-212ENST00000547562 CALML3P27482 149 aa17.68■□□□□ 0.42
BRF1-212ENST00000547562 AFMP43652 599 aa17.68■□□□□ 0.42
BRF1-212ENST00000547562 HSP90AA4PQ58FG1 418 aa17.68■□□□□ 0.42
BRF1-212ENST00000547562 CT47A1Q5JQC4 288 aaPredicted RBP17.68■□□□□ 0.42
BRF1-212ENST00000547562 AMOTL1Q8IY63 956 aa17.68■□□□□ 0.42
BRF1-212ENST00000547562 KIF18AQ8NI77 898 aa17.68■□□□□ 0.42
BRF1-212ENST00000547562 MKNK2Q9HBH9 465 aa17.68■□□□□ 0.42
BRF1-212ENST00000547562 CDK11BP21127 795 aaKnown RBP17.68■□□□□ 0.42
BRF1-212ENST00000547562 NCBP1Q09161 790 aaKnown RBP17.68■□□□□ 0.42
BRF1-212ENST00000547562 CCDC178Q5BJE1 867 aa17.68■□□□□ 0.42
BRF1-212ENST00000547562 PRR5LQ6MZQ0 368 aa17.68■□□□□ 0.42
BRF1-212ENST00000547562 SH3GLB2Q9NR46 395 aa17.68■□□□□ 0.42
BRF1-212ENST00000547562 UBR3Q6ZT12 1888 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 ADAMTS3O15072 1205 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 LDHCP07864 332 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 ADRA2BP18089 450 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 GPR101Q96P66 508 aaPredicted RBP17.67■□□□□ 0.42
BRF1-212ENST00000547562 GPSM2P81274 684 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 DPYDQ12882 1025 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 GRM4Q14833 912 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 PTPN21Q16825 1174 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 TGFBRAP1Q8WUH2 860 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 RPGRQ92834 1020 aaKnown RBP17.67■□□□□ 0.42
BRF1-212ENST00000547562 GSDMAQ96QA5 445 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 TCP11L1Q9NUJ3 509 aa17.67■□□□□ 0.42
BRF1-212ENST00000547562 TSPY3P0CV98 308 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 TSPY8P0CW00 308 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 TBX2Q13207 712 aaPredicted RBP17.66■□□□□ 0.42
BRF1-212ENST00000547562 BLIDQ8IZY5 108 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 STAG2Q8N3U4 1231 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 GJD4Q96KN9 370 aaPredicted RBP17.66■□□□□ 0.42
BRF1-212ENST00000547562 SAMSN1Q9NSI8 373 aaKnown RBP17.66■□□□□ 0.42
BRF1-212ENST00000547562 LRRC4BQ9NT99 713 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 USP17L3A6NCW0 530 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 USP17L4A6NCW7 530 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 CCP110O43303 1012 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 MCM7P33993 719 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 GNAQP50148 359 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 USP17L1Q7RTZ2 530 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 PDCL2Q8N4E4 241 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 CERKQ8TCT0 537 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 CCDC94Q9BW85 323 aaPredicted RBP17.66■□□□□ 0.42
BRF1-212ENST00000547562 RTFDC1Q9BY42 306 aaPredicted RBP17.66■□□□□ 0.42
BRF1-212ENST00000547562 ZMYND15Q9H091 742 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 MAD2L2Q9UI95 211 aa17.66■□□□□ 0.42
BRF1-212ENST00000547562 CASP1P29466 404 aa17.65■□□□□ 0.42
BRF1-212ENST00000547562 E2F4Q16254 413 aa17.65■□□□□ 0.42
BRF1-212ENST00000547562 CRY2Q49AN0 593 aa17.65■□□□□ 0.42
BRF1-212ENST00000547562 ZNF444Q8N0Y2 327 aaPredicted RBP17.65■□□□□ 0.42
BRF1-212ENST00000547562 GPKOWQ92917 476 aaPredicted RBP eCLIP17.65■□□□□ 0.42
BRF1-212ENST00000547562 PCDHA4Q9UN74 947 aa17.65■□□□□ 0.42
BRF1-212ENST00000547562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.64■□□□□ 0.42
BRF1-212ENST00000547562 TUBB4AP04350 444 aa17.64■□□□□ 0.42
BRF1-212ENST00000547562 CUL4BQ13620 913 aa17.64■□□□□ 0.42
BRF1-212ENST00000547562 IL17AQ16552 155 aa17.64■□□□□ 0.42
BRF1-212ENST00000547562 SPECC1LQ69YQ0 1117 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms