RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TRDNQ13061 729 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 ASCC2Q9H1I8 757 aaPredicted RBP19.85■□□□□ 0.77
CCDC38-203ENST00000546803 IL17RBQ9NRM6 502 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 PHIPQ8WWQ0 1821 aa19.84■□□□□ 0.77
CCDC38-203ENST00000546803 REC8O95072 547 aa19.84■□□□□ 0.77
CCDC38-203ENST00000546803 NOVP48745 357 aa19.84■□□□□ 0.77
CCDC38-203ENST00000546803 NECTIN1Q15223 517 aa19.84■□□□□ 0.77
CCDC38-203ENST00000546803 CCDC178Q5BJE1 867 aa19.84■□□□□ 0.77
CCDC38-203ENST00000546803 SMCR8Q8TEV9 937 aaPredicted RBP19.84■□□□□ 0.77
CCDC38-203ENST00000546803 ATAD5Q96QE3 1844 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 ADGRA2Q96PE1 1338 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 B4E1Z4 1266 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 WDR46O15213 610 aaKnown RBP19.83■□□□□ 0.77
CCDC38-203ENST00000546803 FKTNO75072 461 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 KDM4AO75164 1064 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 GCLCP48506 637 aaPredicted RBP19.83■□□□□ 0.77
CCDC38-203ENST00000546803 RNF20Q5VTR2 975 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 C17orf99Q6UX52 265 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 CATSPERGQ6ZRH7 1159 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 IQCA1Q86XH1 822 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 GTF3C2Q8WUA4 911 aaPredicted RBP19.83■□□□□ 0.77
CCDC38-203ENST00000546803 ZNF296Q8WUU4 475 aaPredicted RBP19.83■□□□□ 0.77
CCDC38-203ENST00000546803 TTC14Q96N46 770 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 RPAP3Q9H6T3 665 aaPredicted RBP19.83■□□□□ 0.77
CCDC38-203ENST00000546803 STX8Q9UNK0 236 aa19.83■□□□□ 0.77
CCDC38-203ENST00000546803 F5H6K3 240 aa19.82■□□□□ 0.76
CCDC38-203ENST00000546803 EPB41L2O43491 1005 aaKnown RBP19.82■□□□□ 0.76
CCDC38-203ENST00000546803 SP3Q02447 781 aa19.82■□□□□ 0.76
CCDC38-203ENST00000546803 KLRC3Q07444 240 aa19.82■□□□□ 0.76
CCDC38-203ENST00000546803 KIAA1755Q5JYT7 1200 aa19.82■□□□□ 0.76
CCDC38-203ENST00000546803 GMCL1P1Q8NEA9 526 aa19.82■□□□□ 0.76
CCDC38-203ENST00000546803 ZSWIM5Q9P217 1185 aa19.82■□□□□ 0.76
CCDC38-203ENST00000546803 E7EWF7 191 aa19.81■□□□□ 0.76
CCDC38-203ENST00000546803 SLC27A2O14975 620 aa19.81■□□□□ 0.76
CCDC38-203ENST00000546803 NMT2O60551 498 aa19.81■□□□□ 0.76
CCDC38-203ENST00000546803 CREB3L3Q68CJ9 461 aa19.81■□□□□ 0.76
CCDC38-203ENST00000546803 RALYLQ86SE5 291 aaKnown RBP19.81■□□□□ 0.76
CCDC38-203ENST00000546803 SPICE1Q8N0Z3 855 aa19.81■□□□□ 0.76
CCDC38-203ENST00000546803 NCOA7Q8NI08 942 aa19.81■□□□□ 0.76
CCDC38-203ENST00000546803 P2RX7Q99572 595 aaKnown RBP19.81■□□□□ 0.76
CCDC38-203ENST00000546803 CPA4Q9UI42 421 aa19.81■□□□□ 0.76
CCDC38-203ENST00000546803 EIF5BO60841 1220 aaKnown RBP19.8■□□□□ 0.76
CCDC38-203ENST00000546803 NDUFB10O96000 172 aa19.8■□□□□ 0.76
CCDC38-203ENST00000546803 BCRP11274 1271 aa19.8■□□□□ 0.76
CCDC38-203ENST00000546803 TOP1P11387 765 aaKnown RBP19.8■□□□□ 0.76
CCDC38-203ENST00000546803 HERVK_113P62684 666 aa19.8■□□□□ 0.76
CCDC38-203ENST00000546803 COG2Q14746 738 aa19.8■□□□□ 0.76
CCDC38-203ENST00000546803 DGKHQ86XP1 1220 aa19.8■□□□□ 0.76
CCDC38-203ENST00000546803 LRRC47Q8N1G4 583 aaKnown RBP19.8■□□□□ 0.76
CCDC38-203ENST00000546803 ERO1AQ96HE7 468 aa19.8■□□□□ 0.76
CCDC38-203ENST00000546803 TANGO6Q9C0B7 1094 aa19.8■□□□□ 0.76
CCDC38-203ENST00000546803 HOXC10Q9NYD6 342 aa19.8■□□□□ 0.76
CCDC38-203ENST00000546803 RAD21O60216 631 aa19.79■□□□□ 0.76
CCDC38-203ENST00000546803 SLFN13Q68D06 897 aa19.79■□□□□ 0.76
CCDC38-203ENST00000546803 NKX2-3Q8TAU0 364 aa19.79■□□□□ 0.76
CCDC38-203ENST00000546803 ANKS1AQ92625 1134 aa19.79■□□□□ 0.76
CCDC38-203ENST00000546803 ZSCAN10Q96SZ4 725 aaPredicted RBP19.79■□□□□ 0.76
CCDC38-203ENST00000546803 UBAC1Q9BSL1 405 aa19.79■□□□□ 0.76
CCDC38-203ENST00000546803 GTF3C3Q9Y5Q9 886 aa19.79■□□□□ 0.76
CCDC38-203ENST00000546803 TAF6LQ9Y6J9 622 aa19.79■□□□□ 0.76
CCDC38-203ENST00000546803 MYPNQ86TC9 1320 aa19.78■□□□□ 0.76
CCDC38-203ENST00000546803 GREB1LQ9C091 1923 aaPredicted RBP19.78■□□□□ 0.76
CCDC38-203ENST00000546803 LOC285556D6RIA3 1793 aa19.78■□□□□ 0.76
CCDC38-203ENST00000546803 ARHGEF6Q15052 776 aa19.78■□□□□ 0.76
CCDC38-203ENST00000546803 FAM110CQ1W6H9 321 aa19.78■□□□□ 0.76
CCDC38-203ENST00000546803 RCSD1Q6JBY9 416 aa19.78■□□□□ 0.76
CCDC38-203ENST00000546803 LBX2Q6XYB7 198 aa19.78■□□□□ 0.76
CCDC38-203ENST00000546803 STOX1Q6ZVD7 989 aa19.78■□□□□ 0.76
CCDC38-203ENST00000546803 TMEM47Q9BQJ4 181 aa19.78■□□□□ 0.76
CCDC38-203ENST00000546803 FLOT1O75955 427 aa19.77■□□□□ 0.76
CCDC38-203ENST00000546803 ZKSCAN1P17029 563 aaPredicted RBP19.77■□□□□ 0.76
CCDC38-203ENST00000546803 KIF22Q14807 665 aa19.77■□□□□ 0.76
CCDC38-203ENST00000546803 TSGA10IPQ3SY00 556 aa19.77■□□□□ 0.76
CCDC38-203ENST00000546803 FAM83BQ5T0W9 1011 aa19.77■□□□□ 0.76
CCDC38-203ENST00000546803 ANKRD13CQ8N6S4 541 aa19.77■□□□□ 0.76
CCDC38-203ENST00000546803 GMCL1Q96IK5 515 aa19.77■□□□□ 0.76
CCDC38-203ENST00000546803 ZKSCAN3Q9BRR0 538 aa19.77■□□□□ 0.76
CCDC38-203ENST00000546803 MORF4L1Q9UBU8 362 aa19.77■□□□□ 0.76
CCDC38-203ENST00000546803 PTPRFP10586 1907 aa19.76■□□□□ 0.75
CCDC38-203ENST00000546803 LACTBP83111 547 aaPredicted RBP19.76■□□□□ 0.75
CCDC38-203ENST00000546803 KRT32Q14532 448 aa19.76■□□□□ 0.75
CCDC38-203ENST00000546803 CYB5R4Q7L1T6 521 aa19.76■□□□□ 0.75
CCDC38-203ENST00000546803 MTA3Q9BTC8 594 aa19.76■□□□□ 0.75
CCDC38-203ENST00000546803 RABGAP1Q9Y3P9 1069 aa19.76■□□□□ 0.75
CCDC38-203ENST00000546803 TNKSO95271 1327 aa19.76■□□□□ 0.75
CCDC38-203ENST00000546803 MYH8P13535 1937 aa19.75■□□□□ 0.75
CCDC38-203ENST00000546803 SPDYE16A6NNV3 312 aaPredicted RBP19.75■□□□□ 0.75
CCDC38-203ENST00000546803 BMP3P12645 472 aa19.75■□□□□ 0.75
CCDC38-203ENST00000546803 DSG3P32926 999 aa19.75■□□□□ 0.75
CCDC38-203ENST00000546803 HSPA4P34932 840 aa19.75■□□□□ 0.75
CCDC38-203ENST00000546803 SLC1A4P43007 532 aa19.75■□□□□ 0.75
CCDC38-203ENST00000546803 SART3Q15020 963 aaKnown RBP19.75■□□□□ 0.75
CCDC38-203ENST00000546803 CTU1Q7Z7A3 348 aaKnown RBP19.75■□□□□ 0.75
CCDC38-203ENST00000546803 MB21D2Q8IYB1 491 aaPredicted RBP19.75■□□□□ 0.75
CCDC38-203ENST00000546803 MB21D1Q8N884 522 aa19.75■□□□□ 0.75
CCDC38-203ENST00000546803 ENAHQ8N8S7 591 aaPredicted RBP19.75■□□□□ 0.75
CCDC38-203ENST00000546803 GPRC5AQ8NFJ5 357 aa19.75■□□□□ 0.75
CCDC38-203ENST00000546803 CD99L2Q8TCZ2 262 aa19.75■□□□□ 0.75
CCDC38-203ENST00000546803 KCNB2Q92953 911 aa19.75■□□□□ 0.75
CCDC38-203ENST00000546803 NUP88Q99567 741 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms