RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 KANSL2Q9H9L4 492 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 MAN1B1Q9UKM7 699 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 GDAQ9Y2T3 454 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 TRIM49BA6NDI0 452 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 CASP14P31944 242 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 PTF1AQ7RTS3 328 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 CACNA2D4Q7Z3S7 1137 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 CRACR2AQ9BSW2 395 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 BMP2KQ9NSY1 1161 aaPredicted RBP11.05□□□□□ -0.64
TRAF1-203ENST00000546084 TCP11L1Q9NUJ3 509 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 PPP2R2CQ9Y2T4 447 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 SYNRGQ9UMZ2 1314 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 CIAO1O76071 339 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 CACNB3P54284 484 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 FMR1Q06787 632 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRAF1-203ENST00000546084 UBE3CQ15386 1083 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 TBC1D10BQ4KMP7 808 aaPredicted RBP11.05□□□□□ -0.64
TRAF1-203ENST00000546084 USP17L2Q6R6M4 530 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 TOGARAM2Q6ZUX3 1019 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 FNBP4Q8N3X1 1017 aaPredicted RBP11.05□□□□□ -0.64
TRAF1-203ENST00000546084 GJA10Q969M2 543 aa11.05□□□□□ -0.64
TRAF1-203ENST00000546084 RTCBQ9Y3I0 505 aaKnown RBP11.05□□□□□ -0.64
TRAF1-203ENST00000546084 XRN1Q8IZH2 1706 aaKnown RBP11.04□□□□□ -0.64
TRAF1-203ENST00000546084 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
TRAF1-203ENST00000546084 VEGFAP15692 232 aaPredicted RBP11.04□□□□□ -0.64
TRAF1-203ENST00000546084 TECP42680 631 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 CASP7P55210 303 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 SNAP25P60880 206 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 DTHD1Q6ZMT9 781 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 NELFCDQ8IXH7 590 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 FAM207AQ9NSI2 230 aaPredicted RBP11.04□□□□□ -0.64
TRAF1-203ENST00000546084 AKR1B15C9JRZ8 316 aaPredicted RBP11.04□□□□□ -0.64
TRAF1-203ENST00000546084 ANKRD65E5RJM6 399 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 ARHGAP6O43182 974 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 CCDC175P0C221 793 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 SMC1AQ14683 1233 aaKnown RBP11.04□□□□□ -0.64
TRAF1-203ENST00000546084 CCDC181Q5TID7 509 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 C3orf67Q6ZVT6 689 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 ADGRA1Q86SQ6 560 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 METTL16Q86W50 562 aaKnown RBP11.04□□□□□ -0.64
TRAF1-203ENST00000546084 TEX11Q8IYF3 940 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 TMTC2Q8N394 836 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 FAM107BQ9H098 131 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 L2HGDHQ9H9P8 463 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 FHOD1Q9Y613 1164 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 UTYO14607 1347 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 RGPD8O14715 1765 aaPredicted RBP11.04□□□□□ -0.64
TRAF1-203ENST00000546084 KIF5BP33176 963 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 SLC16A2P36021 539 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 IQUBQ8NA54 791 aa11.04□□□□□ -0.64
TRAF1-203ENST00000546084 MROH5Q6ZUA9 1318 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 AKR1B10O60218 316 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 TUBB4AP04350 444 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 H2AFXP16104 143 aaPredicted RBP11.03□□□□□ -0.64
TRAF1-203ENST00000546084 ZNF76P36508 570 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 IRX5P78411 483 aaPredicted RBP11.03□□□□□ -0.64
TRAF1-203ENST00000546084 LRRC41Q15345 812 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 MAEAQ7L5Y9 396 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 PNMA1Q8ND90 353 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 EFCAB8A8MWE9 144 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 MMP1P03956 469 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 SLURP2P0DP57 97 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 GTF2IP78347 998 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 MECOMQ03112 1051 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 RBL2Q08999 1139 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 SPECC1LQ69YQ0 1117 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 ENAHQ8N8S7 591 aaPredicted RBP11.03□□□□□ -0.64
TRAF1-203ENST00000546084 NELFBQ8WX92 580 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 NLRC4Q9NPP4 1024 aa11.03□□□□□ -0.64
TRAF1-203ENST00000546084 ARID4AP29374 1257 aaPredicted RBP11.02□□□□□ -0.64
TRAF1-203ENST00000546084 PLA2G4AP47712 749 aa11.02□□□□□ -0.64
TRAF1-203ENST00000546084 CYP27A1Q02318 531 aa11.02□□□□□ -0.64
TRAF1-203ENST00000546084 PDE4DQ08499 809 aa11.02□□□□□ -0.64
TRAF1-203ENST00000546084 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.02□□□□□ -0.64
TRAF1-203ENST00000546084 STAG2Q8N3U4 1231 aa11.02□□□□□ -0.64
TRAF1-203ENST00000546084 GPATCH11Q8N954 259 aa11.02□□□□□ -0.64
TRAF1-203ENST00000546084 WDR24Q96S15 920 aa11.02□□□□□ -0.64
TRAF1-203ENST00000546084 SLC39A2Q9NP94 309 aa11.02□□□□□ -0.64
TRAF1-203ENST00000546084 AKAP12Q02952 1782 aa11.02□□□□□ -0.64
TRAF1-203ENST00000546084 NRXN3Q9Y4C0 1643 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 NCAPHQ15003 741 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 TXNRD3Q86VQ6 643 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 GPR108Q9NPR9 543 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 EXOC1Q9NV70 894 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 SCAF8Q9UPN6 1271 aaKnown RBP11.02□□□□□ -0.65
TRAF1-203ENST00000546084 FAM208AQ9UK61 1670 aaKnown RBP11.02□□□□□ -0.65
TRAF1-203ENST00000546084 BAG3O95817 575 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 IL6STP40189 918 aaPredicted RBP11.02□□□□□ -0.65
TRAF1-203ENST00000546084 ITPK1Q13572 414 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 EARS2Q5JPH6 523 aaKnown RBP11.02□□□□□ -0.65
TRAF1-203ENST00000546084 TBC1D9BQ66K14 1250 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 C10orf67Q8IYJ2 551 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 IGDCC4Q8TDY8 1250 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 VPS18Q9P253 973 aa11.02□□□□□ -0.65
TRAF1-203ENST00000546084 IKBKBO14920 756 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 ST5P78524 1137 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 TBC1D8BQ0IIM8 1120 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 LLGL1Q15334 1064 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms