RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 AK2P54819 239 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 EN1Q05925 392 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 RASGRF1Q13972 1273 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 PUM3Q15397 648 aaKnown RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 MCMDC2Q4G0Z9 681 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 ZNF772Q68DY9 489 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 ELOA2Q8IYF1 753 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 SMCR8Q8TEV9 937 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 SPDL1Q96EA4 605 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 CDC5LQ99459 802 aaKnown RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 PUS7LQ9H0K6 701 aaKnown RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 TMEM98Q9Y2Y6 226 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 ZNF609O15014 1411 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 ATRNO75882 1429 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 BTAF1O14981 1849 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 WNK3Q9BYP7 1800 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 SLC27A2O14975 620 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 RNF113AO15541 343 aaKnown RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 INPP5BP32019 993 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 RPS8P62241 208 aaKnown RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 TMED1Q13445 227 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 DBN1Q16643 649 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 ZNF827Q17R98 1081 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 OLFM4Q6UX06 510 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 CLEC4GQ6UXB4 293 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 BRAPQ7Z569 592 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 ARHGAP22Q7Z5H3 698 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 CXorf38Q8TB03 319 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 OSBPL9Q96SU4 736 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 TMEM165Q9HC07 324 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 TRPV5Q9NQA5 729 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 LRP2BPQ9P2M1 347 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 PCDHGC5Q9Y5F6 944 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 HIP1O00291 1037 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 LARGE1O95461 756 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 PEX19P40855 299 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 MAGEA10P43363 369 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-208ENST00000545807 RANBP1P43487 201 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 PUS10Q3MIT2 529 aaKnown RBP7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CCDC83Q8IWF9 413 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 MAGEB6Q8N7X4 407 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 LSM14AQ8ND56 463 aaKnown RBP7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CNNM3Q8NE01 707 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CLIC6Q96NY7 704 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 ACBD3Q9H3P7 528 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 HMG20BQ9P0W2 317 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 DDX20Q9UHI6 824 aaKnown RBP7.53□□□□□ -1.2
NECAP1-208ENST00000545807 RIC1Q4ADV7 1423 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CCDC151A5D8V7 595 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 F8VZ95 297 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 ZEB2O60315 1214 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 SHOX2O60902 331 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CAPN15O75808 1086 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 SERPINB2P05120 415 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 GYS1P13807 737 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 GJA8P48165 433 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 TRPC1P48995 793 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CCZ1BP86790 482 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CCZ1P86791 482 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-208ENST00000545807 ROR2Q01974 943 aaKnown RBP7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CCDC144BQ3MJ40 725 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 RRP12Q5JTH9 1297 aaKnown RBP7.53□□□□□ -1.2
NECAP1-208ENST00000545807 AKNAD1Q5T1N1 836 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 DEFB132Q7Z7B7 95 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 USP48Q86UV5 1035 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 TXNRD3Q86VQ6 643 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CCDC144CPQ8IYA2 1237 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 CEP112Q8N8E3 955 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 FAM71BQ8TC56 605 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 ZFAND2BQ8WV99 257 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 HNRNPLLQ8WVV9 542 aaKnown RBP7.53□□□□□ -1.2
NECAP1-208ENST00000545807 LPIN2Q92539 896 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 FBXW7Q969H0 707 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 UNC45AQ9H3U1 944 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 INCENPQ9NQS7 918 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 MINPP1Q9UNW1 487 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 FRMD4BQ9Y2L6 1034 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 MAST3O60307 1309 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 PHLPP2Q6ZVD8 1323 aa7.53□□□□□ -1.2
NECAP1-208ENST00000545807 RPAP1Q9BWH6 1393 aaPredicted RBP7.52□□□□□ -1.2
NECAP1-208ENST00000545807 KCNJ6P48051 423 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 PKN1Q16512 942 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 LONRF2Q1L5Z9 754 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 RC3H1Q5TC82 1133 aaKnown RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 VGLL2Q8N8G2 317 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 SPATA5Q8NB90 893 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 RPGRQ92834 1020 aaKnown RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 MAP4K1Q92918 833 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 TEKT1Q969V4 418 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 PDGFDQ9GZP0 370 aaPredicted RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 SPATA7Q9P0W8 599 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 FAN1Q9Y2M0 1017 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 CYP46A1Q9Y6A2 500 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 ENO4A6NNW6 628 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 RASSF9O75901 435 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 CYP21A2P08686 494 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 BRD3Q15059 726 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 PRR5LQ6MZQ0 368 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 BLOC1S2Q6QNY1 142 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms