RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 GMIPQ9P107 970 aa8.31□□□□□ -1.08
SNHG1-224ENST00000545688 TMEM59LQ9UK28 342 aa8.31□□□□□ -1.08
SNHG1-224ENST00000545688 SHISA3A0PJX4 238 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 FARP2O94887 1054 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-224ENST00000545688 UBOX5O94941 541 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 GLI1P08151 1106 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 RAG1P15918 1043 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 ERVFC1P60507 584 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 EGR3Q06889 387 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 APOBRQ0VD83 1088 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 MLANAQ16655 118 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 VWCEQ96DN2 955 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 ADAMTS10Q9H324 1103 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 EHMT1Q9H9B1 1298 aa8.3□□□□□ -1.08
SNHG1-224ENST00000545688 HK2P52789 917 aa8.29□□□□□ -1.08
SNHG1-224ENST00000545688 CLCQ05315 142 aa8.29□□□□□ -1.08
SNHG1-224ENST00000545688 GK5Q6ZS86 529 aa8.29□□□□□ -1.08
SNHG1-224ENST00000545688 BACH2Q9BYV9 841 aa8.29□□□□□ -1.08
SNHG1-224ENST00000545688 PCDHA11Q9Y5I1 949 aa8.29□□□□□ -1.08
SNHG1-224ENST00000545688 LTKP29376 864 aa8.28□□□□□ -1.08
SNHG1-224ENST00000545688 POLR2BP30876 1174 aaKnown RBP8.28□□□□□ -1.08
SNHG1-224ENST00000545688 ZNF76P36508 570 aa8.28□□□□□ -1.08
SNHG1-224ENST00000545688 CHMP4BP1P59074 171 aa8.28□□□□□ -1.08
SNHG1-224ENST00000545688 TMEM67Q5HYA8 995 aa8.28□□□□□ -1.08
SNHG1-224ENST00000545688 FAM53CQ9NYF3 392 aa8.28□□□□□ -1.08
SNHG1-224ENST00000545688 RBM47A0AV96 593 aaKnown RBP8.27□□□□□ -1.09
SNHG1-224ENST00000545688 RAC2P15153 192 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 MCM4P33991 863 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 MESP2Q0VG99 397 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 ZNF124Q15973 351 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 CDCP2Q5VXM1 449 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 KIAA0825Q8IV33 1275 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 REXO1Q8N1G1 1221 aaKnown RBP8.27□□□□□ -1.09
SNHG1-224ENST00000545688 NKD1Q969G9 470 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 ATG4CQ96DT6 458 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 EAF1Q96JC9 268 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-224ENST00000545688 SPON2Q9BUD6 331 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 NT5C1AQ9BXI3 368 aa8.27□□□□□ -1.09
SNHG1-224ENST00000545688 RNF4P78317 190 aa8.26□□□□□ -1.09
SNHG1-224ENST00000545688 FANCCQ00597 558 aa8.26□□□□□ -1.09
SNHG1-224ENST00000545688 MPZL3Q6UWV2 235 aa8.26□□□□□ -1.09
SNHG1-224ENST00000545688 PRR23BQ6ZRT6 265 aa8.26□□□□□ -1.09
SNHG1-224ENST00000545688 SLITRK4Q8IW52 837 aa8.26□□□□□ -1.09
SNHG1-224ENST00000545688 KRTAP9-9Q9BYP9 154 aa8.26□□□□□ -1.09
SNHG1-224ENST00000545688 KRTAP9-4Q9BYQ2 154 aa8.26□□□□□ -1.09
SNHG1-224ENST00000545688 ANTXR1Q9H6X2 564 aa8.26□□□□□ -1.09
SNHG1-224ENST00000545688 CNNM2Q9H8M5 875 aa8.26□□□□□ -1.09
SNHG1-224ENST00000545688 ARID1BQ8NFD5 2236 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-224ENST00000545688 BTBD11A6QL63 1104 aa8.25□□□□□ -1.09
SNHG1-224ENST00000545688 HPXP02790 462 aa8.25□□□□□ -1.09
SNHG1-224ENST00000545688 ZGLP1P0C6A0 271 aa8.25□□□□□ -1.09
SNHG1-224ENST00000545688 ZNF165P49910 485 aa8.25□□□□□ -1.09
SNHG1-224ENST00000545688 CLEC16AQ2KHT3 1053 aa8.25□□□□□ -1.09
SNHG1-224ENST00000545688 NLRC3Q7RTR2 1065 aa8.25□□□□□ -1.09
SNHG1-224ENST00000545688 KSR1Q8IVT5 923 aa8.25□□□□□ -1.09
SNHG1-224ENST00000545688 ABHD4Q8TB40 342 aa8.25□□□□□ -1.09
SNHG1-224ENST00000545688 MYLIPQ8WY64 445 aa8.25□□□□□ -1.09
SNHG1-224ENST00000545688 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.25□□□□□ -1.09
SNHG1-224ENST00000545688 TRHRP34981 398 aaPredicted RBP8.24□□□□□ -1.09
SNHG1-224ENST00000545688 JAG1P78504 1218 aa8.24□□□□□ -1.09
SNHG1-224ENST00000545688 NMIQ13287 307 aaPredicted RBP8.24□□□□□ -1.09
SNHG1-224ENST00000545688 ZNF394Q53GI3 561 aa8.24□□□□□ -1.09
SNHG1-224ENST00000545688 NBPF12Q5TAG4 269 aaPredicted RBP8.24□□□□□ -1.09
SNHG1-224ENST00000545688 USP48Q86UV5 1035 aa8.24□□□□□ -1.09
SNHG1-224ENST00000545688 HOMEZQ8IX15 550 aa8.24□□□□□ -1.09
SNHG1-224ENST00000545688 FAM84AQ96KN4 292 aa8.24□□□□□ -1.09
SNHG1-224ENST00000545688 PCDHGB7Q9Y5F8 929 aa8.24□□□□□ -1.09
SNHG1-224ENST00000545688 TEKQ02763 1124 aa8.23□□□□□ -1.09
SNHG1-224ENST00000545688 SNW1Q13573 536 aaKnown RBP8.23□□□□□ -1.09
SNHG1-224ENST00000545688 ZNF512BQ96KM6 892 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-224ENST00000545688 SLC38A3Q99624 504 aa8.23□□□□□ -1.09
SNHG1-224ENST00000545688 HDAC8Q9BY41 377 aa8.23□□□□□ -1.09
SNHG1-224ENST00000545688 ASCC2Q9H1I8 757 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-224ENST00000545688 SP110Q9HB58 689 aa8.23□□□□□ -1.09
SNHG1-224ENST00000545688 MEIS3P2A8K0S8 358 aa8.22□□□□□ -1.09
SNHG1-224ENST00000545688 NME1P15531 152 aaKnown RBP8.22□□□□□ -1.09
SNHG1-224ENST00000545688 FZD5Q13467 585 aa8.22□□□□□ -1.09
SNHG1-224ENST00000545688 NBPF9Q3BBW0 867 aa8.22□□□□□ -1.09
SNHG1-224ENST00000545688 TMC3Q7Z5M5 1100 aa8.22□□□□□ -1.09
SNHG1-224ENST00000545688 PDZD8Q8NEN9 1154 aa8.22□□□□□ -1.09
SNHG1-224ENST00000545688 C19orf44Q9H6X5 657 aa8.22□□□□□ -1.09
SNHG1-224ENST00000545688 METTL5Q9NRN9 209 aaKnown RBP8.22□□□□□ -1.09
SNHG1-224ENST00000545688 CLEC3AO75596 197 aa8.21□□□□□ -1.1
SNHG1-224ENST00000545688 RECKO95980 971 aa8.21□□□□□ -1.1
SNHG1-224ENST00000545688 PKN1Q16512 942 aa8.21□□□□□ -1.1
SNHG1-224ENST00000545688 LRRFIP1Q32MZ4 808 aaKnown RBP8.21□□□□□ -1.1
SNHG1-224ENST00000545688 ENOX1Q8TC92 643 aaKnown RBP8.21□□□□□ -1.1
SNHG1-224ENST00000545688 SYTL5Q8TDW5 730 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-224ENST00000545688 DHX38Q92620 1227 aaKnown RBP8.21□□□□□ -1.1
SNHG1-224ENST00000545688 DIRC2Q96SL1 478 aa8.21□□□□□ -1.1
SNHG1-224ENST00000545688 RNF32Q9H0A6 362 aa8.21□□□□□ -1.1
SNHG1-224ENST00000545688 NSUN3Q9H649 340 aaKnown RBP8.21□□□□□ -1.1
SNHG1-224ENST00000545688 EBF1Q9UH73 591 aa8.21□□□□□ -1.1
SNHG1-224ENST00000545688 TNFRSF10CO14798 259 aa8.2□□□□□ -1.1
SNHG1-224ENST00000545688 CCNFP41002 786 aa8.2□□□□□ -1.1
SNHG1-224ENST00000545688 RAD51AP2Q09MP3 1159 aa8.2□□□□□ -1.1
SNHG1-224ENST00000545688 TIGD5Q53EQ6 642 aa8.2□□□□□ -1.1
SNHG1-224ENST00000545688 TMEM192Q8IY95 271 aa8.2□□□□□ -1.1
SNHG1-224ENST00000545688 RNF34Q969K3 372 aa8.2□□□□□ -1.1
SNHG1-224ENST00000545688 KCNK12Q9HB15 430 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms