RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	GTF2IRD1	Q9UHL9	959 aa		6.63	□□□□□ -1.35
RAP1B-231	ENST00000544639	MAPK8IP1	Q9UQF2	711 aa		6.63	□□□□□ -1.35
RAP1B-231	ENST00000544639	LTBP3	Q9NS15	1303 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	KLF4	O43474	513 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	CYP7A1	P22680	504 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	RBL2	Q08999	1139 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	PPP2R5E	Q16537	467 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	C22orf34	Q6ZV56	151 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	RNF141	Q8WVD5	230 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	VWCE	Q96DN2	955 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	COX4I2	Q96KJ9	171 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	ACTR10	Q9NZ32	417 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639		U3KQE9	123 aa		6.62	□□□□□ -1.35
RAP1B-231	ENST00000544639	CLEC3A	O75596	197 aa		6.61	□□□□□ -1.35
RAP1B-231	ENST00000544639	ZNF865	P0CJ78	1059 aa	Predicted RBP	6.61	□□□□□ -1.35
RAP1B-231	ENST00000544639	PMS1	P54277	932 aa	Known RBP	6.61	□□□□□ -1.35
RAP1B-231	ENST00000544639	SFRP5	Q5T4F7	317 aa		6.61	□□□□□ -1.35
RAP1B-231	ENST00000544639	CKAP2L	Q8IYA6	745 aa		6.61	□□□□□ -1.35
RAP1B-231	ENST00000544639	DHRS1	Q96LJ7	313 aa		6.61	□□□□□ -1.35
RAP1B-231	ENST00000544639	ASPN	Q9BXN1	380 aa		6.61	□□□□□ -1.35
RAP1B-231	ENST00000544639	SUCO	Q9UBS9	1254 aa	Known RBP	6.61	□□□□□ -1.35
RAP1B-231	ENST00000544639	LEMD3	Q9Y2U8	911 aa		6.61	□□□□□ -1.35
RAP1B-231	ENST00000544639	RBAK-RBAKDN	I3L0D1	243 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	FOSL1	P15407	271 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	OXCT1	P55809	520 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	CHMP4BP1	P59074	171 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	RNF4	P78317	190 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	NBPF6	Q5VWK0	638 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	PPFIBP1	Q86W92	1011 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	FAM181A	Q8N9Y4	354 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	NBPF4	Q96M43	638 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	FBXL18	Q96ME1	805 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	DNAJC2	Q99543	621 aa	Known RBP	6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	KRTAP9-9	Q9BYP9	154 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	KRTAP9-4	Q9BYQ2	154 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	PHAX	Q9H814	394 aa	Known RBP	6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	MKNK2	Q9HBH9	465 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	USP35	Q9P2H5	1018 aa		6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	ZNF214	Q9UL59	606 aa	Predicted RBP	6.6	□□□□□ -1.35
RAP1B-231	ENST00000544639	PRR33	A8MZF0	331 aa		6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	CYP26A1	O43174	497 aa		6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	PRNP	P04156	253 aa		6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	HOXA10	P31260	410 aa	Predicted RBP	6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	KIR3DL1	P43629	444 aa		6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	RAB33A	Q14088	237 aa		6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	MSMP	Q1L6U9	139 aa		6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	LRRC4C	Q9HCJ2	640 aa		6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	ADGRE2	Q9UHX3	823 aa		6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	R3HCC1	Q9Y3T6	440 aa	Known RBP	6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	RNF114	Q9Y508	228 aa		6.59	□□□□□ -1.35
RAP1B-231	ENST00000544639	GNAT3	A8MTJ3	354 aa		6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639		C9IYK1	514 aa		6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	CBX7	O95931	251 aa		6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	CEACAM5	P06731	702 aa		6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	YBX3	P16989	372 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	BBS9	Q3SYG4	887 aa		6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	LARP1B	Q659C4	914 aa	Known RBP	6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	MFSD4A	Q8N468	514 aa		6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	SMARCC1	Q92922	1105 aa	Predicted RBP	6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639		Q96M66	194 aa		6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	PCDHB10	Q9UN67	800 aa		6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	CAPN6	Q9Y6Q1	641 aa		6.58	□□□□□ -1.36
RAP1B-231	ENST00000544639	LRRN2	O75325	713 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	SLC7A5	Q01650	507 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	FXN	Q16595	210 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	DDR2	Q16832	855 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	NKPD1	Q17RQ9	610 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	SOGA3	Q5TF21	947 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	TDRD10	Q5VZ19	366 aa	Known RBP	6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	VHLL	Q6RSH7	139 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	ARHGAP27	Q6ZUM4	889 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	SPACA3	Q8IXA5	215 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	CELF2-AS1	Q8N7Q2	184 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	DTWD2	Q8NBA8	298 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	MICAL1	Q8TDZ2	1067 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	KLHL6	Q8WZ60	621 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	TRIM55	Q9BYV6	548 aa		6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	MKRN2	Q9H000	416 aa	Known RBP	6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639	ANGEL1	Q9UNK9	670 aa	Known RBP	6.57	□□□□□ -1.36
RAP1B-231	ENST00000544639		B2RBV5	119 aa		6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	IGSF3	O75054	1194 aa		6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	ITIH2	P19823	946 aa		6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	TNK2	Q07912	1038 aa		6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	SERINC3	Q13530	473 aa		6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	GNPTAB	Q3T906	1256 aa		6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	C6orf15	Q6UXA7	325 aa	Predicted RBP	6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	PLD6	Q8N2A8	252 aa	Known RBP	6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	PIWIL2	Q8TC59	973 aa	Known RBP	6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	CCDC39	Q9UFE4	941 aa		6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	ZC3H7B	Q9UGR2	993 aa	Known RBP	6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	KCNH3	Q9ULD8	1083 aa		6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	PLAGL2	Q9UPG8	496 aa		6.56	□□□□□ -1.36
RAP1B-231	ENST00000544639	NCAPH	Q15003	741 aa		6.55	□□□□□ -1.36
RAP1B-231	ENST00000544639	IFI16	Q16666	785 aa	Known RBP	6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms