RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 TBC1D9Q6ZT07 1266 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 NECAB2Q7Z6G3 386 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 TEX11Q8IYF3 940 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 RUFY2Q8WXA3 655 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 PAWRQ96IZ0 340 aaKnown RBP7.89□□□□□ -1.15
CDCA3-209ENST00000544610 NEUROD6Q96NK8 337 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 ASCC2Q9H1I8 757 aaPredicted RBP7.89□□□□□ -1.15
CDCA3-209ENST00000544610 AS3MTQ9HBK9 375 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 RAI14Q9P0K7 980 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 MORF4L1Q9UBU8 362 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 GJD2Q9UKL4 321 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 SIPA1L1O43166 1804 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 ATAD5Q96QE3 1844 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 RPTORQ8N122 1335 aa7.88□□□□□ -1.15
CDCA3-209ENST00000544610 SOX1O00570 391 aaPredicted RBP7.88□□□□□ -1.15
CDCA3-209ENST00000544610 REC8O95072 547 aa7.88□□□□□ -1.15
CDCA3-209ENST00000544610 MTMR2Q13614 643 aa7.88□□□□□ -1.15
CDCA3-209ENST00000544610 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
CDCA3-209ENST00000544610 GORABQ5T7V8 394 aa7.88□□□□□ -1.15
CDCA3-209ENST00000544610 METTL16Q86W50 562 aaKnown RBP7.88□□□□□ -1.15
CDCA3-209ENST00000544610 KBTBD3Q8NAB2 608 aa7.88□□□□□ -1.15
CDCA3-209ENST00000544610 OTUD7AQ8TE49 926 aaPredicted RBP7.88□□□□□ -1.15
CDCA3-209ENST00000544610 SH3RF3Q8TEJ3 882 aaPredicted RBP7.88□□□□□ -1.15
CDCA3-209ENST00000544610 DIS3LQ8TF46 1054 aaKnown RBP7.88□□□□□ -1.15
CDCA3-209ENST00000544610 DBNDD2Q9BQY9 259 aa7.88□□□□□ -1.15
CDCA3-209ENST00000544610 WDR18Q9BV38 432 aa7.88□□□□□ -1.15
CDCA3-209ENST00000544610 DHX36Q9H2U1 1008 aaKnown RBP7.88□□□□□ -1.15
CDCA3-209ENST00000544610 UPF2Q9HAU5 1272 aaKnown RBP7.88□□□□□ -1.15
CDCA3-209ENST00000544610 PI4KBQ9UBF8 816 aa7.88□□□□□ -1.15
CDCA3-209ENST00000544610 PLXNB2O15031 1838 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 FLT1P17948 1338 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 ASNSP08243 561 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 HOXA7P31268 230 aaPredicted RBP7.87□□□□□ -1.15
CDCA3-209ENST00000544610 BMP8BP34820 402 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 BACE1P56817 501 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 PPP4CP60510 307 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 TRIM32Q13049 653 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 TTC39AQ5SRH9 613 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 MAP3K21Q5TCX8 1036 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 ZSCAN25Q6NSZ9 544 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 CERS3Q8IU89 383 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 TRIB2Q92519 343 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 LRCH3Q96II8 777 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 GDF15Q99988 308 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 NOL10Q9BSC4 688 aaKnown RBP7.87□□□□□ -1.15
CDCA3-209ENST00000544610 NBPF3Q9H094 633 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 CCDC8Q9H0W5 538 aaPredicted RBP7.87□□□□□ -1.15
CDCA3-209ENST00000544610 DNAJC18Q9H819 358 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 HMX1Q9NP08 348 aaPredicted RBP7.87□□□□□ -1.15
CDCA3-209ENST00000544610 AATFQ9NY61 560 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDCA3-209ENST00000544610 LRP2BPQ9P2M1 347 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 OGDHLQ9ULD0 1010 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 ALPK3Q96L96 1907 aa7.87□□□□□ -1.15
CDCA3-209ENST00000544610 DDX60LQ5H9U9 1706 aaKnown RBP7.86□□□□□ -1.15
CDCA3-209ENST00000544610 C19orf81C9J6K1 198 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 BAG3O95817 575 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 XRCC5P13010 732 aaKnown RBP7.86□□□□□ -1.15
CDCA3-209ENST00000544610 CHMLP26374 656 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 MFAP1P55081 439 aaKnown RBP7.86□□□□□ -1.15
CDCA3-209ENST00000544610 HERVK_113P62684 666 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 IRX3P78415 501 aaPredicted RBP7.86□□□□□ -1.15
CDCA3-209ENST00000544610 JAG1P78504 1218 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 NAA16Q6N069 864 aaPredicted RBP7.86□□□□□ -1.15
CDCA3-209ENST00000544610 ADGRA1Q86SQ6 560 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 MAPKAPK5Q8IW41 473 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 C7orf61Q8IZ16 206 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 SOCS4Q8WXH5 440 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 IL17RAQ96F46 866 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 P2RX7Q99572 595 aaKnown RBP7.86□□□□□ -1.15
CDCA3-209ENST00000544610 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDCA3-209ENST00000544610 C11orf49Q9H6J7 331 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 TXNRD2Q9NNW7 524 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 GINM1Q9NU53 330 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 PAG1Q9NWQ8 432 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 TLR7Q9NYK1 1049 aaKnown RBP7.86□□□□□ -1.15
CDCA3-209ENST00000544610 TMOD4Q9NZQ9 345 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 FOCADQ5VW36 1801 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 TRIOBPQ9H2D6 2365 aa7.86□□□□□ -1.15
CDCA3-209ENST00000544610 PFASO15067 1338 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 SPDYE16A6NNV3 312 aaPredicted RBP7.85□□□□□ -1.15
CDCA3-209ENST00000544610 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 USP17L10C9JJH3 530 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 DPYSL4O14531 572 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 CYP2E1P05181 493 aaPredicted RBP7.85□□□□□ -1.15
CDCA3-209ENST00000544610 CYP2B6P20813 491 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 MAPK4P31152 587 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 UBE3CQ15386 1083 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 SHROOM1Q2M3G4 852 aaPredicted RBP7.85□□□□□ -1.15
CDCA3-209ENST00000544610 GPR153Q6NV75 609 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 FOXP4Q8IVH2 680 aaPredicted RBP7.85□□□□□ -1.15
CDCA3-209ENST00000544610 TRMT44Q8IYL2 757 aaKnown RBP7.85□□□□□ -1.15
CDCA3-209ENST00000544610 GPRC5AQ8NFJ5 357 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 GTF3C2Q8WUA4 911 aaPredicted RBP7.85□□□□□ -1.15
CDCA3-209ENST00000544610 TGFBRAP1Q8WUH2 860 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 USP6NLQ92738 828 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 NUDT12Q9BQG2 462 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 HELLSQ9NRZ9 838 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 PLA2G2EQ9NZK7 142 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 RBPJLQ9UBG7 517 aa7.85□□□□□ -1.15
CDCA3-209ENST00000544610 ZBTB21Q9ULJ3 1066 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms