RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 HAUS7Q99871 368 aa16.78■□□□□ 0.28
SEMA4D-224ENST00000544513 ARMT1Q9H993 441 aa16.78■□□□□ 0.28
SEMA4D-224ENST00000544513 CWC22Q9HCG8 908 aaKnown RBP16.78■□□□□ 0.28
SEMA4D-224ENST00000544513 SWAP70Q9UH65 585 aa16.78■□□□□ 0.28
SEMA4D-224ENST00000544513 CUL9Q8IWT3 2517 aa16.77■□□□□ 0.28
SEMA4D-224ENST00000544513 PRKAB2O43741 272 aa16.77■□□□□ 0.28
SEMA4D-224ENST00000544513 SLFNL1Q499Z3 407 aa16.77■□□□□ 0.28
SEMA4D-224ENST00000544513 MFSD14CQ5VZR4 134 aa16.77■□□□□ 0.28
SEMA4D-224ENST00000544513 ATP8A2Q9NTI2 1148 aa16.77■□□□□ 0.28
SEMA4D-224ENST00000544513 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 SYN1P17600 705 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 MAGEA10P43363 369 aaPredicted RBP16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 LRRC26Q2I0M4 334 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 C12orf60Q5U649 245 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 WDR78Q5VTH9 848 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 TRPV1Q8NER1 839 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 NPLOC4Q8TAT6 608 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 LPAR1Q92633 364 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 DYNLL2Q96FJ2 89 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 LRCH3Q96II8 777 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 MOV10L1Q9BXT6 1211 aaKnown RBP16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 BOLA2Q9H3K6 86 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 IVNS1ABPQ9Y6Y0 642 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 A0A0G2JMZ2 1700 aa16.76■□□□□ 0.27
SEMA4D-224ENST00000544513 ZNF236Q9UL36 1845 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 SMIM22K7EJ46 135 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 STRNO43815 780 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 MBD4O95243 580 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 ATP2B2Q01814 1243 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 UBE3CQ15386 1083 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 GPR153Q6NV75 609 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 MB21D1Q8N884 522 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 TANGO6Q9C0B7 1094 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 SPATC1LQ9H0A9 340 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 CHMP4BQ9H444 224 aaKnown RBP16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 DDX20Q9UHI6 824 aaKnown RBP16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 TMX2Q9Y320 296 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 FRMPD3Q5JV73 1810 aa16.75■□□□□ 0.27
SEMA4D-224ENST00000544513 MSCO60682 206 aa16.74■□□□□ 0.27
SEMA4D-224ENST00000544513 AKR1B1P15121 316 aa16.74■□□□□ 0.27
SEMA4D-224ENST00000544513 DSG3P32926 999 aa16.74■□□□□ 0.27
SEMA4D-224ENST00000544513 CYP2C19P33261 490 aa16.74■□□□□ 0.27
SEMA4D-224ENST00000544513 LRIT3Q3SXY7 679 aa16.74■□□□□ 0.27
SEMA4D-224ENST00000544513 OLFML2BQ68BL8 750 aa16.74■□□□□ 0.27
SEMA4D-224ENST00000544513 CCDC17Q96LX7 622 aa16.74■□□□□ 0.27
SEMA4D-224ENST00000544513 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.74■□□□□ 0.27
SEMA4D-224ENST00000544513 BAZ2AQ9UIF9 1905 aaKnown RBP16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 CYP2D7A0A087X1C5 515 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 CHGBP05060 677 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 CYBAP13498 195 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 ERCC3P19447 782 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 ADORA2AP29274 412 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 CDK8P49336 464 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 C16orf86Q6ZW13 317 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 CLEC10AQ8IUN9 316 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 VCPKMTQ9H867 229 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 ADAMTS5Q9UNA0 930 aa16.73■□□□□ 0.27
SEMA4D-224ENST00000544513 USP17L12C9JPN9 530 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 USP17L21D6R901 530 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 COBLO75128 1261 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 ICA1Q05084 483 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 DPP9Q86TI2 863 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 TDHQ8IZJ6 230 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 ABRAQ8N0Z2 381 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 MROH8Q9H579 483 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 SH2D4AQ9H788 454 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 ARHGEF10LQ9HCE6 1279 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
SEMA4D-224ENST00000544513 MYH8P13535 1937 aa16.71■□□□□ 0.27
SEMA4D-224ENST00000544513 DNM1LO00429 736 aa16.71■□□□□ 0.27
SEMA4D-224ENST00000544513 WDR46O15213 610 aaKnown RBP16.71■□□□□ 0.27
SEMA4D-224ENST00000544513 FLOT1O75955 427 aa16.71■□□□□ 0.27
SEMA4D-224ENST00000544513 SPICE1Q8N0Z3 855 aa16.71■□□□□ 0.27
SEMA4D-224ENST00000544513 ATG4CQ96DT6 458 aa16.71■□□□□ 0.27
SEMA4D-224ENST00000544513 LRRCC1Q9C099 1032 aa16.71■□□□□ 0.27
SEMA4D-224ENST00000544513 SENP6Q9GZR1 1112 aaPredicted RBP16.71■□□□□ 0.27
SEMA4D-224ENST00000544513 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
SEMA4D-224ENST00000544513 PARP14Q460N5 1801 aa16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 MYH7P12883 1935 aa16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 CNGA1P29973 690 aa16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 C20orf194Q5TEA3 1177 aa16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 CTR9Q6PD62 1173 aa16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 UBE2OQ9C0C9 1292 aaKnown RBP16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 PUS7LQ9H0K6 701 aaKnown RBP16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 KANSL2Q9H9L4 492 aa16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 SLC4A4Q9Y6R1 1079 aa16.7■□□□□ 0.26
SEMA4D-224ENST00000544513 EEF2P13639 858 aaKnown RBP16.69■□□□□ 0.26
SEMA4D-224ENST00000544513 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
SEMA4D-224ENST00000544513 ZSCAN25Q6NSZ9 544 aa16.69■□□□□ 0.26
SEMA4D-224ENST00000544513 UNC80Q8N2C7 3258 aa16.68■□□□□ 0.26
SEMA4D-224ENST00000544513 SEPT4O43236 478 aa16.68■□□□□ 0.26
SEMA4D-224ENST00000544513 SMARCA5O60264 1052 aaPredicted RBP16.68■□□□□ 0.26
SEMA4D-224ENST00000544513 AMOTL1Q8IY63 956 aa16.68■□□□□ 0.26
SEMA4D-224ENST00000544513 ARRDC4Q8NCT1 418 aa16.68■□□□□ 0.26
SEMA4D-224ENST00000544513 DDRGK1Q96HY6 314 aa16.68■□□□□ 0.26
SEMA4D-224ENST00000544513 STRBPQ96SI9 672 aaKnown RBP16.68■□□□□ 0.26
SEMA4D-224ENST00000544513 ECHDC1Q9NTX5 307 aa16.68■□□□□ 0.26
SEMA4D-224ENST00000544513 SLC5A4Q9NY91 659 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms