RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-211ENST00000544496 SHTN1A0MZ66 631 aa27.08■■□□□ 1.93
PCMT1-211ENST00000544496 GREB1LQ9C091 1923 aaPredicted RBP27.07■■□□□ 1.92
PCMT1-211ENST00000544496 GNL2Q13823 731 aaKnown RBP27.07■■□□□ 1.92
PCMT1-211ENST00000544496 ASPRV1Q53RT3 343 aa27.07■■□□□ 1.92
PCMT1-211ENST00000544496 SAMD7Q7Z3H4 446 aa27.07■■□□□ 1.92
PCMT1-211ENST00000544496 MKL1Q969V6 931 aa27.07■■□□□ 1.92
PCMT1-211ENST00000544496 AIFM3Q96NN9 605 aa27.07■■□□□ 1.92
PCMT1-211ENST00000544496 RNF181Q9P0P0 153 aa27.07■■□□□ 1.92
PCMT1-211ENST00000544496 SYNPO2Q9UMS6 1093 aa27.07■■□□□ 1.92
PCMT1-211ENST00000544496 DDX49Q9Y6V7 483 aaKnown RBP27.07■■□□□ 1.92
PCMT1-211ENST00000544496 FAM196BA6NMK8 535 aa27.06■■□□□ 1.92
PCMT1-211ENST00000544496 MBD3O95983 291 aa27.06■■□□□ 1.92
PCMT1-211ENST00000544496 YBX3P16989 372 aaKnown RBP eCLIP27.06■■□□□ 1.92
PCMT1-211ENST00000544496 KLHL40Q2TBA0 621 aa27.06■■□□□ 1.92
PCMT1-211ENST00000544496 TBC1D10BQ4KMP7 808 aaPredicted RBP27.06■■□□□ 1.92
PCMT1-211ENST00000544496 OTUD7BQ6GQQ9 843 aa27.06■■□□□ 1.92
PCMT1-211ENST00000544496 USP48Q86UV5 1035 aa27.06■■□□□ 1.92
PCMT1-211ENST00000544496 TMEM39BQ9GZU3 492 aa27.06■■□□□ 1.92
PCMT1-211ENST00000544496 GUCY1A2P33402 732 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 KIF23Q02241 960 aaPredicted RBP27.05■■□□□ 1.92
PCMT1-211ENST00000544496 RASA3Q14644 834 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 FAM177A1Q8N128 213 aaPredicted RBP27.05■■□□□ 1.92
PCMT1-211ENST00000544496 CHAMP1Q96JM3 812 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 SPZ1Q9BXG8 430 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 ELP1O95163 1332 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 SBF1O95248 1867 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 KLRF2D3W0D1 207 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 FIBPO43427 364 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 MMP1P03956 469 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 MAP3K10Q02779 954 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 PKN1Q16512 942 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 HOOK2Q96ED9 719 aa27.05■■□□□ 1.92
PCMT1-211ENST00000544496 SNHG28P0DPA3 235 aa27.04■■□□□ 1.92
PCMT1-211ENST00000544496 PDHBP11177 359 aa27.04■■□□□ 1.92
PCMT1-211ENST00000544496 ICA1Q05084 483 aa27.04■■□□□ 1.92
PCMT1-211ENST00000544496 PFKFB3Q16875 520 aaPredicted RBP27.04■■□□□ 1.92
PCMT1-211ENST00000544496 APOBEC3FQ8IUX4 373 aaKnown RBP27.04■■□□□ 1.92
PCMT1-211ENST00000544496 STAG2Q8N3U4 1231 aa27.04■■□□□ 1.92
PCMT1-211ENST00000544496 SCG2P13521 617 aa27.03■■□□□ 1.92
PCMT1-211ENST00000544496 U2AF2P26368 475 aaKnown RBP eCLIP27.03■■□□□ 1.925e-11■■□□□ 13.2
PCMT1-211ENST00000544496 GPATCH4Q5T3I0 446 aaKnown RBP27.03■■□□□ 1.92
PCMT1-211ENST00000544496 FOXP1Q9H334 677 aaPredicted RBP27.03■■□□□ 1.92
PCMT1-211ENST00000544496 BRMS1Q9HCU9 246 aa27.03■■□□□ 1.92
PCMT1-211ENST00000544496 PGAP2Q9UHJ9 254 aa27.03■■□□□ 1.92
PCMT1-211ENST00000544496 HACL1Q9UJ83 578 aa27.03■■□□□ 1.92
PCMT1-211ENST00000544496 MTMR7Q9Y216 660 aa27.03■■□□□ 1.92
PCMT1-211ENST00000544496 EGFRP00533 1210 aa27.02■■□□□ 1.92
PCMT1-211ENST00000544496 LMOD1P29536 600 aaPredicted RBP27.02■■□□□ 1.92
PCMT1-211ENST00000544496 ATP2B2Q01814 1243 aa27.02■■□□□ 1.92
PCMT1-211ENST00000544496 FAM173BQ6P4H8 233 aa27.02■■□□□ 1.92
PCMT1-211ENST00000544496 LRRC47Q8N1G4 583 aaKnown RBP27.02■■□□□ 1.92
PCMT1-211ENST00000544496 SPATA32Q96LK8 384 aa27.02■■□□□ 1.92
PCMT1-211ENST00000544496 GDPD2Q9HCC8 539 aa27.02■■□□□ 1.92
PCMT1-211ENST00000544496 SH3GLB2Q9NR46 395 aa27.02■■□□□ 1.92
PCMT1-211ENST00000544496 EEF2P13639 858 aaKnown RBP27.01■■□□□ 1.92
PCMT1-211ENST00000544496 UBE2HP62256 183 aa27.01■■□□□ 1.92
PCMT1-211ENST00000544496 SEPT2Q15019 361 aa27.01■■□□□ 1.92
PCMT1-211ENST00000544496 GJB4Q9NTQ9 266 aa27.01■■□□□ 1.92
PCMT1-211ENST00000544496 GDF11O95390 407 aa27.01■■□□□ 1.91
PCMT1-211ENST00000544496 GH2P01242 217 aa27.01■■□□□ 1.91
PCMT1-211ENST00000544496 SLURP2P0DP57 97 aa27.01■■□□□ 1.91
PCMT1-211ENST00000544496 USP17L2Q6R6M4 530 aa27.01■■□□□ 1.91
PCMT1-211ENST00000544496 GINM1Q9NU53 330 aa27.01■■□□□ 1.91
PCMT1-211ENST00000544496 USP17L5A8MUK1 530 aa27■■□□□ 1.91
PCMT1-211ENST00000544496 UBE2Q2LH0YL09 131 aa27■■□□□ 1.91
PCMT1-211ENST00000544496 GRIN3BO60391 1043 aa27■■□□□ 1.91
PCMT1-211ENST00000544496 C9orf131Q5VYM1 1079 aa27■■□□□ 1.91
PCMT1-211ENST00000544496 DPY19L2Q6NUT2 758 aa27■■□□□ 1.91
PCMT1-211ENST00000544496 DCAF4Q8WV16 495 aa27■■□□□ 1.91
PCMT1-211ENST00000544496 GOLGB1Q14789 3259 aaKnown RBP27■■□□□ 1.91
PCMT1-211ENST00000544496 MYH6P13533 1939 aa26.99■■□□□ 1.91
PCMT1-211ENST00000544496 ZNF543Q08ER8 600 aa26.99■■□□□ 1.91
PCMT1-211ENST00000544496 MYSM1Q5VVJ2 828 aa26.99■■□□□ 1.91
PCMT1-211ENST00000544496 DIS3L2Q8IYB7 885 aaKnown RBP26.99■■□□□ 1.91
PCMT1-211ENST00000544496 RRP36Q96EU6 259 aaKnown RBP26.99■■□□□ 1.91
PCMT1-211ENST00000544496 PHF20Q9BVI0 1012 aa26.99■■□□□ 1.91
PCMT1-211ENST00000544496 DEFB129Q9H1M3 183 aa26.99■■□□□ 1.91
PCMT1-211ENST00000544496 ARHGEF10LQ9HCE6 1279 aa26.99■■□□□ 1.91
PCMT1-211ENST00000544496 TFIP11Q9UBB9 837 aaKnown RBP26.99■■□□□ 1.91
PCMT1-211ENST00000544496 PPP2R3BQ9Y5P8 575 aa26.99■■□□□ 1.91
PCMT1-211ENST00000544496 ZC3H4Q9UPT8 1303 aaKnown RBP26.98■■□□□ 1.91
PCMT1-211ENST00000544496 GOLGA8HP0CJ92 632 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 GPR162Q16538 588 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 CLEC10AQ8IUN9 316 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 GMCL1P1Q8NEA9 526 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 TEPSINQ96N21 525 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 SEC63Q9UGP8 760 aaKnown RBP26.98■■□□□ 1.91
PCMT1-211ENST00000544496 TCHHQ07283 1943 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 CALML3P27482 149 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 CAP2P40123 477 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 NOSTRINQ8IVI9 506 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 CCDC148Q8NFR7 591 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 LEO1Q8WVC0 666 aaPredicted RBP26.98■■□□□ 1.91
PCMT1-211ENST00000544496 RIOX1Q9H6W3 641 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 VPS54Q9P1Q0 977 aa26.98■■□□□ 1.91
PCMT1-211ENST00000544496 GOLGA6L4A6NEF3 574 aa26.97■■□□□ 1.91
PCMT1-211ENST00000544496 KIF28PB7ZC32 967 aa26.97■■□□□ 1.91
PCMT1-211ENST00000544496 hCG_1984214I3L0E3 225 aa26.97■■□□□ 1.91
PCMT1-211ENST00000544496 ASNSP08243 561 aa26.97■■□□□ 1.91
PCMT1-211ENST00000544496 KRT2P35908 639 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms