RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 CCNA1P78396 465 aa16.61■□□□□ 0.25
VAMP1-208ENST00000544432 COG2Q14746 738 aa16.61■□□□□ 0.25
VAMP1-208ENST00000544432 DOCK3Q8IZD9 2030 aa16.61■□□□□ 0.25
VAMP1-208ENST00000544432 SPDYE16A6NNV3 312 aaPredicted RBP16.6■□□□□ 0.25
VAMP1-208ENST00000544432 CAPN2P17655 700 aa16.6■□□□□ 0.25
VAMP1-208ENST00000544432 KIAA1755Q5JYT7 1200 aa16.6■□□□□ 0.25
VAMP1-208ENST00000544432 SOCS4Q8WXH5 440 aa16.6■□□□□ 0.25
VAMP1-208ENST00000544432 NAPBQ9H115 298 aa16.6■□□□□ 0.25
VAMP1-208ENST00000544432 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
VAMP1-208ENST00000544432 BIN2Q9UBW5 565 aaPredicted RBP16.6■□□□□ 0.25
VAMP1-208ENST00000544432 PDE4DIPQ5VU43 2346 aa16.6■□□□□ 0.25
VAMP1-208ENST00000544432 WDR46O15213 610 aaKnown RBP16.59■□□□□ 0.25
VAMP1-208ENST00000544432 FOXP2O15409 715 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 GJB1P08034 283 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 SLC3A2P08195 630 aaKnown RBP16.59■□□□□ 0.25
VAMP1-208ENST00000544432 XRCC5P13010 732 aaKnown RBP16.59■□□□□ 0.25
VAMP1-208ENST00000544432 PDE4BQ07343 736 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 MTFR1Q15390 333 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 ALX1Q15699 326 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 MCMDC2Q4G0Z9 681 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 CLEC10AQ8IUN9 316 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 ZNF444Q8N0Y2 327 aaPredicted RBP16.59■□□□□ 0.25
VAMP1-208ENST00000544432 MB21D1Q8N884 522 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 NKX2-3Q8TAU0 364 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 PAGR1Q9BTK6 254 aa16.59■□□□□ 0.25
VAMP1-208ENST00000544432 MYH8P13535 1937 aa16.58■□□□□ 0.25
VAMP1-208ENST00000544432 MKI67P46013 3256 aaKnown RBP16.58■□□□□ 0.25
VAMP1-208ENST00000544432 IGKV6D-41A0A0C4DH26 115 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 PEX10O60683 326 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 CCL5P13501 91 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 ELNP15502 786 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 PPARAQ07869 468 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 MORN1Q5T089 497 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 GPR142Q7Z601 462 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 PLEKHH3Q7Z736 793 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 CCAR1Q8IX12 1150 aaKnown RBP16.58■□□□□ 0.24
VAMP1-208ENST00000544432 TRMT44Q8IYL2 757 aaKnown RBP16.58■□□□□ 0.24
VAMP1-208ENST00000544432 USP6NLQ92738 828 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 NUDT12Q9BQG2 462 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 TANGO6Q9C0B7 1094 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 PORCNQ9H237 461 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 BTBD7Q9P203 1132 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 ANAPC4Q9UJX5 808 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 SYNPO2Q9UMS6 1093 aa16.58■□□□□ 0.24
VAMP1-208ENST00000544432 TRIM6-TRIM34B2RNG4 842 aa16.57■□□□□ 0.24
VAMP1-208ENST00000544432 MYCP01106 439 aaPredicted RBP16.57■□□□□ 0.24
VAMP1-208ENST00000544432 INHAP05111 366 aa16.57■□□□□ 0.24
VAMP1-208ENST00000544432 DSG3P32926 999 aa16.57■□□□□ 0.24
VAMP1-208ENST00000544432 GJA8P48165 433 aa16.57■□□□□ 0.24
VAMP1-208ENST00000544432 CCDC129Q6ZRS4 1044 aa16.57■□□□□ 0.24
VAMP1-208ENST00000544432 MKL1Q969V6 931 aa16.57■□□□□ 0.24
VAMP1-208ENST00000544432 RNF208Q9H0X6 261 aa16.57■□□□□ 0.24
VAMP1-208ENST00000544432 PLIN4Q96Q06 1357 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 A0A0D9SFI3 127 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 HMGCRP04035 888 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 SPICE1Q8N0Z3 855 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 NEDD1Q8NHV4 660 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 RILPL2Q969X0 211 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 FAM227BQ96M60 508 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 MTMR4Q9NYA4 1195 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 ADAMTS5Q9UNA0 930 aa16.56■□□□□ 0.24
VAMP1-208ENST00000544432 GREB1LQ9C091 1923 aaPredicted RBP16.56■□□□□ 0.24
VAMP1-208ENST00000544432 PRDM1O75626 825 aa16.55■□□□□ 0.24
VAMP1-208ENST00000544432 FLOT1O75955 427 aa16.55■□□□□ 0.24
VAMP1-208ENST00000544432 SDSP20132 328 aa16.55■□□□□ 0.24
VAMP1-208ENST00000544432 RGS2P41220 211 aa16.55■□□□□ 0.24
VAMP1-208ENST00000544432 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
VAMP1-208ENST00000544432 VPS53Q5VIR6 699 aa16.55■□□□□ 0.24
VAMP1-208ENST00000544432 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
VAMP1-208ENST00000544432 UNC93B1Q9H1C4 597 aa16.55■□□□□ 0.24
VAMP1-208ENST00000544432 PAK6Q9NQU5 681 aaPredicted RBP16.55■□□□□ 0.24
VAMP1-208ENST00000544432 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
VAMP1-208ENST00000544432 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 SLC15A5A6NIM6 579 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 STRNO43815 780 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 FGAP02671 866 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 FGRP09769 529 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 HSPD1P10809 573 aaKnown RBP16.54■□□□□ 0.24
VAMP1-208ENST00000544432 CYP2B6P20813 491 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 PTPREP23469 700 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 MFAP1P55081 439 aaKnown RBP16.54■□□□□ 0.24
VAMP1-208ENST00000544432 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
VAMP1-208ENST00000544432 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 SPATC1LQ9H0A9 340 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
VAMP1-208ENST00000544432 RLFQ13129 1914 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 CCDC171Q6TFL3 1326 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 F5H6K3 240 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 HIP1O00291 1037 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 SGPL1O95470 568 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 TTLL1O95922 423 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 HOXC6P09630 235 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 TSPY3P0CV98 308 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 TSPY8P0CW00 308 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 IRX6P78412 446 aaPredicted RBP16.53■□□□□ 0.24
VAMP1-208ENST00000544432 TFAP4Q01664 338 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 KLRC3Q07444 240 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms