RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 TTC6Q86TZ1 520 aa22.3■■□□□ 1.16
RAP1B-229ENST00000543393 IDH1O75874 414 aaKnown RBP22.29■■□□□ 1.16
RAP1B-229ENST00000543393 ERCC3P19447 782 aa22.29■■□□□ 1.16
RAP1B-229ENST00000543393 SHMT1P34896 483 aa22.29■■□□□ 1.16
RAP1B-229ENST00000543393 COG2Q14746 738 aa22.29■■□□□ 1.16
RAP1B-229ENST00000543393 LRRC41Q15345 812 aa22.29■■□□□ 1.16
RAP1B-229ENST00000543393 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
RAP1B-229ENST00000543393 SPATC1LQ9H0A9 340 aa22.29■■□□□ 1.16
RAP1B-229ENST00000543393 HOXC10Q9NYD6 342 aa22.29■■□□□ 1.16
RAP1B-229ENST00000543393 TTC28Q96AY4 2481 aa22.29■■□□□ 1.16
RAP1B-229ENST00000543393 ITGB8P26012 769 aa22.28■■□□□ 1.16
RAP1B-229ENST00000543393 PLCD1P51178 756 aa22.28■■□□□ 1.16
RAP1B-229ENST00000543393 TLE2Q04725 743 aa22.28■■□□□ 1.16
RAP1B-229ENST00000543393 OS9Q13438 667 aaPredicted RBP22.28■■□□□ 1.16
RAP1B-229ENST00000543393 FAM47AQ5JRC9 791 aa22.28■■□□□ 1.16
RAP1B-229ENST00000543393 MAGEB6Q8N7X4 407 aa22.28■■□□□ 1.16
RAP1B-229ENST00000543393 SHCBP1Q8NEM2 672 aa22.28■■□□□ 1.16
RAP1B-229ENST00000543393 RNPC3Q96LT9 517 aaKnown RBP22.28■■□□□ 1.16
RAP1B-229ENST00000543393 TNNQ9UQP3 1299 aa22.28■■□□□ 1.16
RAP1B-229ENST00000543393 SMCHD1A6NHR9 2005 aa22.28■■□□□ 1.16
RAP1B-229ENST00000543393 MUC3AQ02505 3323 aa22.27■■□□□ 1.16
RAP1B-229ENST00000543393 TMEM265A0A087WTH1 108 aa22.27■■□□□ 1.16
RAP1B-229ENST00000543393 A0A0G2JMZ2 1700 aa22.27■■□□□ 1.16
RAP1B-229ENST00000543393 TRIM27P14373 513 aa22.27■■□□□ 1.16
RAP1B-229ENST00000543393 SEPT2Q15019 361 aa22.27■■□□□ 1.16
RAP1B-229ENST00000543393 TANGO6Q9C0B7 1094 aa22.27■■□□□ 1.16
RAP1B-229ENST00000543393 SLC5A4Q9NY91 659 aa22.27■■□□□ 1.16
RAP1B-229ENST00000543393 DBNLQ9UJU6 430 aaKnown RBP22.27■■□□□ 1.16
RAP1B-229ENST00000543393 TACC3Q9Y6A5 838 aa22.27■■□□□ 1.16
RAP1B-229ENST00000543393 A0A1W2PRG0 241 aa22.26■■□□□ 1.15
RAP1B-229ENST00000543393 EPHB4P54760 987 aa22.26■■□□□ 1.15
RAP1B-229ENST00000543393 POLA2Q14181 598 aa22.26■■□□□ 1.15
RAP1B-229ENST00000543393 TLR7Q9NYK1 1049 aaKnown RBP22.26■■□□□ 1.15
RAP1B-229ENST00000543393 ZNFX1Q9P2E3 1918 aaKnown RBP22.25■■□□□ 1.15
RAP1B-229ENST00000543393 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
RAP1B-229ENST00000543393 CLTBP09497 229 aa22.25■■□□□ 1.15
RAP1B-229ENST00000543393 MAML3Q96JK9 1138 aa22.25■■□□□ 1.15
RAP1B-229ENST00000543393 PLS1Q14651 629 aa22.24■■□□□ 1.15
RAP1B-229ENST00000543393 GRIN2CQ14957 1233 aa22.24■■□□□ 1.15
RAP1B-229ENST00000543393 NCAPG2Q86XI2 1143 aa22.24■■□□□ 1.15
RAP1B-229ENST00000543393 USP38Q8NB14 1042 aa22.24■■□□□ 1.15
RAP1B-229ENST00000543393 MROH8Q9H579 483 aa22.24■■□□□ 1.15
RAP1B-229ENST00000543393 PHF24Q9UPV7 400 aa22.24■■□□□ 1.15
RAP1B-229ENST00000543393 MPHOSPH10O00566 681 aaKnown RBP22.23■■□□□ 1.15
RAP1B-229ENST00000543393 IPO8O15397 1037 aaKnown RBP22.23■■□□□ 1.15
RAP1B-229ENST00000543393 SURF6O75683 361 aaKnown RBP22.23■■□□□ 1.15
RAP1B-229ENST00000543393 GABPAQ06546 454 aa22.23■■□□□ 1.15
RAP1B-229ENST00000543393 TJAP1Q5JTD0 557 aa22.23■■□□□ 1.15
RAP1B-229ENST00000543393 ABRAQ8N0Z2 381 aa22.23■■□□□ 1.15
RAP1B-229ENST00000543393 MB21D1Q8N884 522 aa22.23■■□□□ 1.15
RAP1B-229ENST00000543393 SSH3Q8TE77 659 aa22.23■■□□□ 1.15
RAP1B-229ENST00000543393 CLUAP1Q96AJ1 413 aa22.23■■□□□ 1.15
RAP1B-229ENST00000543393 CCDC8Q9H0W5 538 aaPredicted RBP22.23■■□□□ 1.15
RAP1B-229ENST00000543393 NAV1Q8NEY1 1877 aa22.22■■□□□ 1.15
RAP1B-229ENST00000543393 KIAA0355O15063 1070 aa22.22■■□□□ 1.15
RAP1B-229ENST00000543393 POLR3DP05423 398 aaPredicted RBP22.22■■□□□ 1.15
RAP1B-229ENST00000543393 RAG1P15918 1043 aa22.22■■□□□ 1.15
RAP1B-229ENST00000543393 KIAA1755Q5JYT7 1200 aa22.22■■□□□ 1.15
RAP1B-229ENST00000543393 ANTXR1Q9H6X2 564 aa22.22■■□□□ 1.15
RAP1B-229ENST00000543393 XPNPEP3Q9NQH7 507 aa22.22■■□□□ 1.15
RAP1B-229ENST00000543393 PQBP1O60828 265 aaKnown RBP22.21■■□□□ 1.15
RAP1B-229ENST00000543393 RARBP10826 455 aa22.21■■□□□ 1.15
RAP1B-229ENST00000543393 COL9A1P20849 921 aa22.21■■□□□ 1.15
RAP1B-229ENST00000543393 DNAJB2P25686 324 aa22.21■■□□□ 1.15
RAP1B-229ENST00000543393 DSG3P32926 999 aa22.21■■□□□ 1.15
RAP1B-229ENST00000543393 EVX2Q03828 476 aa22.21■■□□□ 1.15
RAP1B-229ENST00000543393 MAP3K12Q12852 859 aa22.21■■□□□ 1.15
RAP1B-229ENST00000543393 FRAT1Q92837 279 aaPredicted RBP22.21■■□□□ 1.15
RAP1B-229ENST00000543393 RIOK1Q9BRS2 568 aaKnown RBP22.21■■□□□ 1.15
RAP1B-229ENST00000543393 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.2■■□□□ 1.14
RAP1B-229ENST00000543393 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.2■■□□□ 1.14
RAP1B-229ENST00000543393 A0A1W2PQ45 241 aaPredicted RBP22.2■■□□□ 1.14
RAP1B-229ENST00000543393 A0A1W2PQY0 241 aa22.2■■□□□ 1.14
RAP1B-229ENST00000543393 TNFRSF10AO00220 468 aa22.2■■□□□ 1.14
RAP1B-229ENST00000543393 BCAR3O75815 825 aa22.2■■□□□ 1.14
RAP1B-229ENST00000543393 PGK1P00558 417 aa22.2■■□□□ 1.14
RAP1B-229ENST00000543393 FCER1AP12319 257 aa22.2■■□□□ 1.14
RAP1B-229ENST00000543393 ATP8B2P98198 1209 aa22.2■■□□□ 1.14
RAP1B-229ENST00000543393 FPGSQ05932 587 aa22.2■■□□□ 1.14
RAP1B-229ENST00000543393 RNF180Q86T96 592 aa22.2■■□□□ 1.14
RAP1B-229ENST00000543393 EAF2Q96CJ1 260 aaPredicted RBP22.2■■□□□ 1.14
RAP1B-229ENST00000543393 ATG4CQ96DT6 458 aa22.2■■□□□ 1.14
RAP1B-229ENST00000543393 FLOT1O75955 427 aa22.19■■□□□ 1.14
RAP1B-229ENST00000543393 TMED8Q6PL24 325 aaPredicted RBP22.19■■□□□ 1.14
RAP1B-229ENST00000543393 ZNF576Q9H609 170 aa22.19■■□□□ 1.14
RAP1B-229ENST00000543393 TMEM39AQ9NV64 488 aa22.19■■□□□ 1.14
RAP1B-229ENST00000543393 NRBP1Q9UHY1 535 aa22.19■■□□□ 1.14
RAP1B-229ENST00000543393 PARP14Q460N5 1801 aa22.19■■□□□ 1.14
RAP1B-229ENST00000543393 PLXNA1Q9UIW2 1896 aa22.18■■□□□ 1.14
RAP1B-229ENST00000543393 SAMD1Q6SPF0 538 aaPredicted RBP22.18■■□□□ 1.14
RAP1B-229ENST00000543393 SPICE1Q8N0Z3 855 aa22.18■■□□□ 1.14
RAP1B-229ENST00000543393 NOP58Q9Y2X3 529 aaKnown RBP22.18■■□□□ 1.14
RAP1B-229ENST00000543393 COL11A1P12107 1806 aaPredicted RBP22.17■■□□□ 1.14
RAP1B-229ENST00000543393 MAGEB6P1A0A0J9YX57 407 aa22.17■■□□□ 1.14
RAP1B-229ENST00000543393 TAL1P17542 331 aaPredicted RBP22.17■■□□□ 1.14
RAP1B-229ENST00000543393 FAAP100Q0VG06 881 aa22.17■■□□□ 1.14
RAP1B-229ENST00000543393 TMEM132BQ14DG7 1078 aa22.17■■□□□ 1.14
RAP1B-229ENST00000543393 TMEM179Q6ZVK1 233 aa22.17■■□□□ 1.14
RAP1B-229ENST00000543393 TMEM57Q8N5G2 664 aa22.17■■□□□ 1.14
RAP1B-229ENST00000543393 TINF2Q9BSI4 451 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms