RNA–Protein interactions for RNA: ENST00000543237.5

GPHN-204, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-204ENST00000543237 VIL1P09327 827 aaKnown RBP6.32□□□□□ -1.4
GPHN-204ENST00000543237 TM4SF1P30408 202 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 LIG3P49916 1009 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 PAPOLAP51003 745 aaKnown RBP6.32□□□□□ -1.4
GPHN-204ENST00000543237 CCDC57Q2TAC2 916 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 CCDC38Q502W7 563 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 CEP85Q6P2H3 762 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 MTHFD1LQ6UB35 978 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 ERMNQ8TAM6 284 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 LMBR1Q8WVP7 490 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 HOOK2Q96ED9 719 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 TMX3Q96JJ7 454 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 TMEM165Q9HC07 324 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 ANKIB1Q9P2G1 1089 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 TPX2Q9ULW0 747 aaKnown RBP6.32□□□□□ -1.4
GPHN-204ENST00000543237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.32□□□□□ -1.4
GPHN-204ENST00000543237 USP16Q9Y5T5 823 aa6.32□□□□□ -1.4
GPHN-204ENST00000543237 A6NJR5 290 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 LIN7AO14910 233 aaPredicted RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 MYO1BO43795 1136 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 SMARCA5O60264 1052 aaPredicted RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 STK10O94804 968 aaKnown RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 FSBPO95073 299 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 HOXA10P31260 410 aaPredicted RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 SLC8A1P32418 973 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 NEK4P51957 841 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 HDLBPQ00341 1268 aaKnown RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 USP4Q13107 963 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.4
GPHN-204ENST00000543237 KCNB1Q14721 858 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 DALRD3Q5D0E6 543 aaKnown RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 CAPRIN2Q6IMN6 1127 aaKnown RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 FOXR1Q6PIV2 292 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 CLEC4GQ6UXB4 293 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 ARHGAP27Q6ZUM4 889 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 SMYD1Q8NB12 490 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 ATP11CQ8NB49 1132 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 SPC24Q8NBT2 197 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 SETDB2Q96T68 719 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 PHACTR1Q9C0D0 580 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.31□□□□□ -1.4
GPHN-204ENST00000543237 TSPYL4Q9UJ04 414 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 ITM2BQ9Y287 266 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 ATP10DQ9P241 1426 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 UNCXA6NJT0 531 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 EFCAB8A8MWE9 144 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 ATP6V1G1O75348 118 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 EIF4BP23588 611 aaKnown RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 RPL13P26373 211 aaKnown RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 PIP4K2AP48426 406 aaPredicted RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 PSMD7P51665 324 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 CUL4AQ13619 759 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 Q4G0T1 1027 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 CCDC93Q567U6 631 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 CCDC183Q5T5S1 534 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 CC2D1AQ6P1N0 951 aaPredicted RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 TTLL7Q6ZT98 887 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 KIAA0825Q8IV33 1275 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 CARMIL3Q8ND23 1372 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 NEK9Q8TD19 979 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 CUL5Q93034 780 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 XAGE2Q96GT9 111 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 CHAMP1Q96JM3 812 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 TMEM106CQ9BVX2 250 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 DNAAF2Q9NVR5 837 aaKnown RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 SWAP70Q9UH65 585 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 PUF60Q9UHX1 559 aaKnown RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 PNMA2Q9UL42 364 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 CORO1CQ9ULV4 474 aaPredicted RBP6.31□□□□□ -1.4
GPHN-204ENST00000543237 PCDHGC5Q9Y5F6 944 aa6.31□□□□□ -1.4
GPHN-204ENST00000543237 PRAMEF22A3QJZ6 481 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 H0YIN7 160 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 PPFIA3O75145 1194 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 GIGYF1O75420 1035 aaPredicted RBP6.3□□□□□ -1.4
GPHN-204ENST00000543237 PTGS1P23219 599 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 CHRNA5P30532 468 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 GBP2P32456 591 aaPredicted RBP6.3□□□□□ -1.4
GPHN-204ENST00000543237 PLCB4Q15147 1175 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 TBC1D9BQ66K14 1250 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 DPY19L2Q6NUT2 758 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 TMEM110Q86TL2 294 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 GPR161Q8N6U8 529 aaKnown RBP6.3□□□□□ -1.4
GPHN-204ENST00000543237 LZICQ8WZA0 190 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 TUBA8Q9NY65 449 aaPredicted RBP6.3□□□□□ -1.4
GPHN-204ENST00000543237 TBC1D7Q9P0N9 293 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 FAM169AQ9Y6X4 670 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 SCN7AQ01118 1682 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 ZNF189O75820 626 aaPredicted RBP6.3□□□□□ -1.4
GPHN-204ENST00000543237 ZFXP17010 805 aaPredicted RBP6.3□□□□□ -1.4
GPHN-204ENST00000543237 CUL3Q13618 768 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 CLPPQ16740 277 aaPredicted RBP6.3□□□□□ -1.4
GPHN-204ENST00000543237 CEP85LQ5SZL2 805 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 ZSCAN25Q6NSZ9 544 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 KIF6Q6ZMV9 814 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 CNBD1Q8NA66 436 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 TRIM58Q8NG06 486 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 INTS4Q96HW7 963 aaKnown RBP6.3□□□□□ -1.4
GPHN-204ENST00000543237 GORASP1Q9BQQ3 440 aa6.3□□□□□ -1.4
GPHN-204ENST00000543237 MAK16Q9BXY0 300 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms