RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
ECHDC2-223ENST00000542552 MYPNQ86TC9 1320 aa18.4■□□□□ 0.54
ECHDC2-223ENST00000542552 PLIN4Q96Q06 1357 aa18.4■□□□□ 0.54
ECHDC2-223ENST00000542552 HIP1O00291 1037 aa18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 PEX10O60683 326 aa18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 SLC3A2P08195 630 aaKnown RBP18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 PRKCZQ05513 592 aa18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 GPRC5AQ8NFJ5 357 aa18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 ZNF333Q96JL9 665 aa18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 NYAP2Q9P242 653 aa18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 GABRQQ9UN88 632 aa18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 TACC3Q9Y6A5 838 aa18.39■□□□□ 0.53
ECHDC2-223ENST00000542552 PARP14Q460N5 1801 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 TNPO2O14787 897 aaKnown RBP18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 CNMDO75829 334 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 FGRP09769 529 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 MFAP1P55081 439 aaKnown RBP18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 ERVK-9P63128 1117 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 ERVK-24P63145 666 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 Q3C1V9 767 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 SLC9C1Q4G0N8 1177 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 NEDD1Q8NHV4 660 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 MKL1Q969V6 931 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 RABGAP1Q9Y3P9 1069 aa18.38■□□□□ 0.53
ECHDC2-223ENST00000542552 A0A0G2JMZ2 1700 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 RBBP6Q7Z6E9 1792 aaKnown RBP18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 PLXNB2O15031 1838 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 SPDYE16A6NNV3 312 aaPredicted RBP18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 FLT3LGP49771 235 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 SOX10P56693 466 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 CTDSPL2Q05D32 466 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 IRF5Q13568 498 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 COG2Q14746 738 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 CWC27Q6UX04 472 aaKnown RBP18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 NBPF11Q86T75 865 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 COA7Q96BR5 231 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 INCENPQ9NQS7 918 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 MTMR4Q9NYA4 1195 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 HOXC10Q9NYD6 342 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 GJD2Q9UKL4 321 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
ECHDC2-223ENST00000542552 WDR46O15213 610 aaKnown RBP18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 ORC4O43929 436 aa18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 TFAP4Q01664 338 aa18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 ATP2B2Q01814 1243 aa18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 SPICE1Q8N0Z3 855 aa18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 RAET1EQ8TD07 263 aa18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 SH3TC2Q8TF17 1288 aa18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 SYNPO2Q9UMS6 1093 aa18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 MKI67P46013 3256 aaKnown RBP18.36■□□□□ 0.53
ECHDC2-223ENST00000542552 GRK4P32298 578 aa18.35■□□□□ 0.53
ECHDC2-223ENST00000542552 FAM47AQ5JRC9 791 aa18.35■□□□□ 0.53
ECHDC2-223ENST00000542552 CENPQQ7L2Z9 268 aaPredicted RBP18.35■□□□□ 0.53
ECHDC2-223ENST00000542552 PAGR1Q9BTK6 254 aa18.35■□□□□ 0.53
ECHDC2-223ENST00000542552 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
ECHDC2-223ENST00000542552 GOPCQ9HD26 462 aa18.35■□□□□ 0.53
ECHDC2-223ENST00000542552 BTBD7Q9P203 1132 aa18.35■□□□□ 0.53
ECHDC2-223ENST00000542552 CLIP2Q9UDT6 1046 aa18.35■□□□□ 0.53
ECHDC2-223ENST00000542552 KIAA0100Q14667 2235 aaKnown RBP18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 TSPY3P0CV98 308 aa18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 TSPY8P0CW00 308 aa18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 MAPK4P31152 587 aa18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 DSG3P32926 999 aa18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 SLAIN1Q8ND83 568 aa18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 PXYLP1Q8TE99 480 aa18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 NBPF3Q9H094 633 aa18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 PORCNQ9H237 461 aa18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 LAMA4Q16363 1823 aa18.34■□□□□ 0.53
ECHDC2-223ENST00000542552 F5H6K3 240 aa18.33■□□□□ 0.52
ECHDC2-223ENST00000542552 ADCY3O60266 1144 aa18.33■□□□□ 0.52
ECHDC2-223ENST00000542552 TTLL1O95922 423 aa18.33■□□□□ 0.52
ECHDC2-223ENST00000542552 NOVP48745 357 aa18.33■□□□□ 0.52
ECHDC2-223ENST00000542552 KLRC3Q07444 240 aa18.33■□□□□ 0.52
ECHDC2-223ENST00000542552 IL25Q9H293 177 aa18.33■□□□□ 0.52
ECHDC2-223ENST00000542552 IL17RBQ9NRM6 502 aa18.33■□□□□ 0.52
ECHDC2-223ENST00000542552 ADAMTS5Q9UNA0 930 aa18.33■□□□□ 0.52
ECHDC2-223ENST00000542552 FLOT1O75955 427 aa18.32■□□□□ 0.52
ECHDC2-223ENST00000542552 NDUFB10O96000 172 aa18.32■□□□□ 0.52
ECHDC2-223ENST00000542552 CHMLP26374 656 aa18.32■□□□□ 0.52
ECHDC2-223ENST00000542552 CCNA1P78396 465 aa18.32■□□□□ 0.52
ECHDC2-223ENST00000542552 MB21D1Q8N884 522 aa18.32■□□□□ 0.52
ECHDC2-223ENST00000542552 GMCL1P1Q8NEA9 526 aa18.32■□□□□ 0.52
ECHDC2-223ENST00000542552 USP6NLQ92738 828 aa18.32■□□□□ 0.52
ECHDC2-223ENST00000542552 DSCC1Q9BVC3 393 aa18.32■□□□□ 0.52
ECHDC2-223ENST00000542552 POTEFA5A3E0 1075 aa18.31■□□□□ 0.52
ECHDC2-223ENST00000542552 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
ECHDC2-223ENST00000542552 HAND2P61296 217 aa18.31■□□□□ 0.52
ECHDC2-223ENST00000542552 FAM83BQ5T0W9 1011 aa18.31■□□□□ 0.52
ECHDC2-223ENST00000542552 GPR142Q7Z601 462 aa18.31■□□□□ 0.52
ECHDC2-223ENST00000542552 PLEKHH3Q7Z736 793 aa18.31■□□□□ 0.52
ECHDC2-223ENST00000542552 STAG1Q8WVM7 1258 aa18.31■□□□□ 0.52
ECHDC2-223ENST00000542552 ATG4CQ96DT6 458 aa18.31■□□□□ 0.52
ECHDC2-223ENST00000542552 FBXO28Q9NVF7 368 aa18.31■□□□□ 0.52
ECHDC2-223ENST00000542552 COL11A1P12107 1806 aaPredicted RBP18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 RAD50Q92878 1312 aa18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 TSPY2A6NKD2 308 aa18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 RANBP6O60518 1105 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms