RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
C2CD3-218ENST00000542484 RNF112Q9ULX5 631 aa6.7□□□□□ -1.34
C2CD3-218ENST00000542484 CAPN6Q9Y6Q1 641 aa6.7□□□□□ -1.34
C2CD3-218ENST00000542484 GNAT3A8MTJ3 354 aa6.69□□□□□ -1.34
C2CD3-218ENST00000542484 PRR33A8MZF0 331 aa6.69□□□□□ -1.34
C2CD3-218ENST00000542484 CEACAM5P06731 702 aa6.69□□□□□ -1.34
C2CD3-218ENST00000542484 SOGA3Q5TF21 947 aa6.69□□□□□ -1.34
C2CD3-218ENST00000542484 PPFIBP1Q86W92 1011 aa6.69□□□□□ -1.34
C2CD3-218ENST00000542484 SPACA3Q8IXA5 215 aa6.69□□□□□ -1.34
C2CD3-218ENST00000542484 FAM181AQ8N9Y4 354 aa6.69□□□□□ -1.34
C2CD3-218ENST00000542484 DTWD2Q8NBA8 298 aa6.69□□□□□ -1.34
C2CD3-218ENST00000542484 PIWIL2Q8TC59 973 aaKnown RBP6.69□□□□□ -1.34
C2CD3-218ENST00000542484 Q96M66 194 aa6.69□□□□□ -1.34
C2CD3-218ENST00000542484 PPP1R1BQ9UD71 204 aaPredicted RBP6.69□□□□□ -1.34
C2CD3-218ENST00000542484 R3HCC1Q9Y3T6 440 aaKnown RBP6.69□□□□□ -1.34
C2CD3-218ENST00000542484 C9IYK1 514 aa6.68□□□□□ -1.34
C2CD3-218ENST00000542484 FXNQ16595 210 aa6.68□□□□□ -1.34
C2CD3-218ENST00000542484 NKPD1Q17RQ9 610 aa6.68□□□□□ -1.34
C2CD3-218ENST00000542484 MSMPQ1L6U9 139 aa6.68□□□□□ -1.34
C2CD3-218ENST00000542484 INTS5Q6P9B9 1019 aaKnown RBP6.68□□□□□ -1.34
C2CD3-218ENST00000542484 ARHGAP27Q6ZUM4 889 aa6.68□□□□□ -1.34
C2CD3-218ENST00000542484 ZC3H7BQ9UGR2 993 aaKnown RBP6.68□□□□□ -1.34
C2CD3-218ENST00000542484 KCNH3Q9ULD8 1083 aa6.68□□□□□ -1.34
C2CD3-218ENST00000542484 CBX7O95931 251 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 HOXA10P31260 410 aaPredicted RBP6.67□□□□□ -1.34
C2CD3-218ENST00000542484 GRIK1P39086 918 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 CLCN7P51798 805 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 SLC7A5Q01650 507 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 TNK2Q07912 1038 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 NCAPHQ15003 741 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 IFI16Q16666 785 aaKnown RBP6.67□□□□□ -1.34
C2CD3-218ENST00000542484 VHLLQ6RSH7 139 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 NETO1Q8TDF5 533 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 KLHL6Q8WZ60 621 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 ZNF512BQ96KM6 892 aaPredicted RBP6.67□□□□□ -1.34
C2CD3-218ENST00000542484 DNAJC2Q99543 621 aaKnown RBP6.67□□□□□ -1.34
C2CD3-218ENST00000542484 TRIM55Q9BYV6 548 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 MKRN2Q9H000 416 aaKnown RBP6.67□□□□□ -1.34
C2CD3-218ENST00000542484 PLAGL2Q9UPG8 496 aa6.67□□□□□ -1.34
C2CD3-218ENST00000542484 NISCHQ9Y2I1 1504 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 RBAK-RBAKDNI3L0D1 243 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 LRRN2O75325 713 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 ITIH2P19823 946 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 SERINC3Q13530 473 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 DDR2Q16832 855 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 NBPF9Q3BBW0 867 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 GNPTABQ3T906 1256 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 TDRD10Q5VZ19 366 aaKnown RBP6.66□□□□□ -1.34
C2CD3-218ENST00000542484 LARP1BQ659C4 914 aaKnown RBP6.66□□□□□ -1.34
C2CD3-218ENST00000542484 PLD6Q8N2A8 252 aaKnown RBP6.66□□□□□ -1.34
C2CD3-218ENST00000542484 CELF2-AS1Q8N7Q2 184 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 MICAL1Q8TDZ2 1067 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 USP35Q9P2H5 1018 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 PCDHB10Q9UN67 800 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 SNX11Q9Y5W9 270 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 ST14Q9Y5Y6 855 aa6.66□□□□□ -1.34
C2CD3-218ENST00000542484 FAM155AB1AL88 458 aaPredicted RBP6.65□□□□□ -1.34
C2CD3-218ENST00000542484 SHOXO15266 292 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 COBLO75128 1261 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 SRFP11831 508 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 CD97P48960 835 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 AUHQ13825 339 aaKnown RBP6.65□□□□□ -1.34
C2CD3-218ENST00000542484 AXDND1Q5T1B0 1012 aaPredicted RBP6.65□□□□□ -1.34
C2CD3-218ENST00000542484 C6orf15Q6UXA7 325 aaPredicted RBP6.65□□□□□ -1.34
C2CD3-218ENST00000542484 FAM178BQ8IXR5 827 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 CCDC144CPQ8IYA2 1237 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 C7orf61Q8IZ16 206 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 HAUS7Q99871 368 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 GPR62Q9BZJ7 368 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 PRR13Q9NZ81 148 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 SIRPGQ9P1W8 387 aa6.65□□□□□ -1.34
C2CD3-218ENST00000542484 TMEM265A0A087WTH1 108 aa6.64□□□□□ -1.35
C2CD3-218ENST00000542484 KIAA1324LA8MWY0 1029 aaPredicted RBP6.64□□□□□ -1.35
C2CD3-218ENST00000542484 B2RBV5 119 aa6.64□□□□□ -1.35
C2CD3-218ENST00000542484 U2SURPO15042 1029 aaKnown RBP6.64□□□□□ -1.35
C2CD3-218ENST00000542484 CBFA2T2O43439 604 aa6.64□□□□□ -1.35
C2CD3-218ENST00000542484 TP53P04637 393 aaPredicted RBP6.64□□□□□ -1.35
C2CD3-218ENST00000542484 DCAF15Q66K64 600 aa6.64□□□□□ -1.35
C2CD3-218ENST00000542484 KIAA1211LQ6NV74 962 aa6.64□□□□□ -1.35
C2CD3-218ENST00000542484 THAP5Q7Z6K1 395 aa6.64□□□□□ -1.35
C2CD3-218ENST00000542484 MSRB2Q9Y3D2 182 aa6.64□□□□□ -1.35
C2CD3-218ENST00000542484 PCDHB12Q9Y5F1 795 aa6.64□□□□□ -1.35
C2CD3-218ENST00000542484 DDAH1O94760 285 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 GJB6O95452 261 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 PRNPP04156 253 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 SPINK2P20155 84 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 ZNF143P52747 638 aaPredicted RBP6.63□□□□□ -1.35
C2CD3-218ENST00000542484 SNW1Q13573 536 aaKnown RBP6.63□□□□□ -1.35
C2CD3-218ENST00000542484 MRM1Q6IN84 353 aaKnown RBP6.63□□□□□ -1.35
C2CD3-218ENST00000542484 DTX1Q86Y01 620 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 MISP3Q96FF7 219 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 PITPNM2Q9BZ72 1349 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 PRDM14Q9GZV8 571 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 KLHL25Q9H0H3 589 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 DUSP15Q9H1R2 295 aaPredicted RBP6.63□□□□□ -1.35
C2CD3-218ENST00000542484 FAM86C1Q9NVL1 165 aa6.63□□□□□ -1.35
C2CD3-218ENST00000542484 BSDC1Q9NW68 430 aaPredicted RBP6.63□□□□□ -1.35
C2CD3-218ENST00000542484 SIGLEC6O43699 453 aa6.62□□□□□ -1.35
C2CD3-218ENST00000542484 MED26O95402 600 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms