RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
VPS33A-206ENST00000542310 H0YGN5 161 aa18.77■□□□□ 0.6
VPS33A-206ENST00000542310 CHGBP05060 677 aa18.77■□□□□ 0.6
VPS33A-206ENST00000542310 AKR1B1P15121 316 aa18.77■□□□□ 0.6
VPS33A-206ENST00000542310 CDK8P49336 464 aa18.77■□□□□ 0.6
VPS33A-206ENST00000542310 DPF3Q92784 378 aa18.77■□□□□ 0.6
VPS33A-206ENST00000542310 TMX2Q9Y320 296 aa18.77■□□□□ 0.6
VPS33A-206ENST00000542310 COL11A1P12107 1806 aaPredicted RBP18.77■□□□□ 0.59
VPS33A-206ENST00000542310 SLC15A5A6NIM6 579 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 ERC2O15083 957 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 PRKAR2AP13861 404 aaKnown RBP18.76■□□□□ 0.59
VPS33A-206ENST00000542310 TRIM32Q13049 653 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 MAP2K5Q13163 448 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 COG2Q14746 738 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 SBK1Q52WX2 424 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 CTR9Q6PD62 1173 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 MB21D1Q8N884 522 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 STRBPQ96SI9 672 aaKnown RBP18.76■□□□□ 0.59
VPS33A-206ENST00000542310 VCPKMTQ9H867 229 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 HOXC10Q9NYD6 342 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 BTBD7Q9P203 1132 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 PCDHB15Q9Y5E8 787 aa18.76■□□□□ 0.59
VPS33A-206ENST00000542310 MYH4Q9Y623 1939 aa18.75■□□□□ 0.59
VPS33A-206ENST00000542310 CYP2D7A0A087X1C5 515 aa18.75■□□□□ 0.59
VPS33A-206ENST00000542310 WDR46O15213 610 aaKnown RBP18.75■□□□□ 0.59
VPS33A-206ENST00000542310 HOXC6P09630 235 aa18.75■□□□□ 0.59
VPS33A-206ENST00000542310 GNAT2P19087 354 aa18.75■□□□□ 0.59
VPS33A-206ENST00000542310 GRB14Q14449 540 aa18.75■□□□□ 0.59
VPS33A-206ENST00000542310 TANGO6Q9C0B7 1094 aa18.75■□□□□ 0.59
VPS33A-206ENST00000542310 OGDHLQ9ULD0 1010 aa18.75■□□□□ 0.59
VPS33A-206ENST00000542310 NR2E3Q9Y5X4 410 aa18.75■□□□□ 0.59
VPS33A-206ENST00000542310 IVNS1ABPQ9Y6Y0 642 aa18.75■□□□□ 0.59
VPS33A-206ENST00000542310 RNF113AO15541 343 aaKnown RBP18.74■□□□□ 0.59
VPS33A-206ENST00000542310 PTPREP23469 700 aa18.74■□□□□ 0.59
VPS33A-206ENST00000542310 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
VPS33A-206ENST00000542310 NECAB2Q7Z6G3 386 aa18.74■□□□□ 0.59
VPS33A-206ENST00000542310 SIAH1Q8IUQ4 282 aa18.74■□□□□ 0.59
VPS33A-206ENST00000542310 SHCBP1Q8NEM2 672 aa18.74■□□□□ 0.59
VPS33A-206ENST00000542310 KANSL2Q9H9L4 492 aa18.74■□□□□ 0.59
VPS33A-206ENST00000542310 PCDH10Q9P2E7 1040 aa18.74■□□□□ 0.59
VPS33A-206ENST00000542310 GSG1L2A8MUP6 293 aa18.73■□□□□ 0.59
VPS33A-206ENST00000542310 GPAA1O43292 621 aa18.73■□□□□ 0.59
VPS33A-206ENST00000542310 CLEC10AQ8IUN9 316 aa18.73■□□□□ 0.59
VPS33A-206ENST00000542310 PI4K2BQ8TCG2 481 aa18.73■□□□□ 0.59
VPS33A-206ENST00000542310 OSBP2Q969R2 916 aa18.73■□□□□ 0.59
VPS33A-206ENST00000542310 COLQQ9Y215 455 aaPredicted RBP18.73■□□□□ 0.59
VPS33A-206ENST00000542310 SMIM22K7EJ46 135 aa18.72■□□□□ 0.59
VPS33A-206ENST00000542310 DSG3P32926 999 aa18.72■□□□□ 0.59
VPS33A-206ENST00000542310 CACNB2Q08289 660 aaPredicted RBP18.72■□□□□ 0.59
VPS33A-206ENST00000542310 KIAA1755Q5JYT7 1200 aa18.72■□□□□ 0.59
VPS33A-206ENST00000542310 WDR78Q5VTH9 848 aa18.72■□□□□ 0.59
VPS33A-206ENST00000542310 PAWRQ96IZ0 340 aaKnown RBP18.72■□□□□ 0.59
VPS33A-206ENST00000542310 SPATC1LQ9H0A9 340 aa18.72■□□□□ 0.59
VPS33A-206ENST00000542310 GOPCQ9HD26 462 aa18.72■□□□□ 0.59
VPS33A-206ENST00000542310 STRNO43815 780 aa18.71■□□□□ 0.59
VPS33A-206ENST00000542310 FLOT1O75955 427 aa18.71■□□□□ 0.59
VPS33A-206ENST00000542310 CCL14Q16627 93 aa18.71■□□□□ 0.59
VPS33A-206ENST00000542310 MFSD14CQ5VZR4 134 aa18.71■□□□□ 0.59
VPS33A-206ENST00000542310 DIS3LQ8TF46 1054 aaKnown RBP18.71■□□□□ 0.59
VPS33A-206ENST00000542310 MOV10L1Q9BXT6 1211 aaKnown RBP18.71■□□□□ 0.59
VPS33A-206ENST00000542310 NBPF3Q9H094 633 aa18.71■□□□□ 0.59
VPS33A-206ENST00000542310 SALL3Q9BXA9 1300 aa18.71■□□□□ 0.59
VPS33A-206ENST00000542310 ZNFX1Q9P2E3 1918 aaKnown RBP18.7■□□□□ 0.58
VPS33A-206ENST00000542310 TRIOBPQ9H2D6 2365 aa18.7■□□□□ 0.58
VPS33A-206ENST00000542310 EVI5O60447 810 aa18.7■□□□□ 0.58
VPS33A-206ENST00000542310 EEF2P13639 858 aaKnown RBP18.7■□□□□ 0.58
VPS33A-206ENST00000542310 MX1P20591 662 aa18.7■□□□□ 0.58
VPS33A-206ENST00000542310 MNX1P50219 401 aaPredicted RBP18.7■□□□□ 0.58
VPS33A-206ENST00000542310 ZNF287Q9HBT7 754 aa18.7■□□□□ 0.58
VPS33A-206ENST00000542310 EPB41L4AQ9HCS5 686 aaPredicted RBP18.7■□□□□ 0.58
VPS33A-206ENST00000542310 PLXNA1Q9UIW2 1896 aa18.7■□□□□ 0.58
VPS33A-206ENST00000542310 PLIN4Q96Q06 1357 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 M0R2C6 588 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 MSCO60682 206 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 RASA1P20936 1047 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 TDO2P48775 406 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 FXR1P51114 621 aaKnown RBP eCLIP18.69■□□□□ 0.58
VPS33A-206ENST00000542310 AAMPQ13685 434 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 CHRDL2Q6WN34 429 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 ABRAQ8N0Z2 381 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 SPICE1Q8N0Z3 855 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 MROH8Q9H579 483 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 C11orf49Q9H6J7 331 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 ADAMTS5Q9UNA0 930 aa18.69■□□□□ 0.58
VPS33A-206ENST00000542310 IGHA2P01877 340 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 ERCC3P19447 782 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 CCND3P30281 292 aaPredicted RBP18.68■□□□□ 0.58
VPS33A-206ENST00000542310 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
VPS33A-206ENST00000542310 OLFML2BQ68BL8 750 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 ATG4CQ96DT6 458 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 FSD1Q9BTV5 496 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.68■□□□□ 0.58
VPS33A-206ENST00000542310 NACAP1Q9BZK3 213 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 PRO3102Q9H379 93 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 MKNK2Q9HBH9 465 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 FLRT1Q9NZU1 646 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 NYAP2Q9P242 653 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 ZBTB47Q9UFB7 747 aaPredicted RBP18.68■□□□□ 0.58
VPS33A-206ENST00000542310 SYNPO2Q9UMS6 1093 aa18.68■□□□□ 0.58
VPS33A-206ENST00000542310 RANBP2P49792 3224 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms