RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 DBN1Q16643 649 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 ZNF449Q6P9G9 518 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 NELFBQ8WX92 580 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 AMFRQ9UKV5 643 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 SH3TC1Q8TE82 1336 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 STX2P32856 288 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 IFRD2Q12894 506 aaPredicted RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 PPP2R5BQ15173 497 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 TPH2Q8IWU9 490 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 FAM71BQ8TC56 605 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 CABLES1Q8TDN4 633 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 CABS1Q96KC9 395 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 MMS19Q96T76 1030 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 ANGEL1Q9UNK9 670 aaKnown RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-204ENST00000541819 ARHGAP42A6NI28 874 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 H0YCG3 227 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
GABRB3-204ENST00000541819 GAS7O60861 476 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 LIG4P49917 911 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 HS1BP3Q53T59 392 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 PAGR1Q9BTK6 254 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.83□□□□□ -0.52
GABRB3-204ENST00000541819 EYA2O00167 538 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 FANCCQ00597 558 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 TCP10Q12799 353 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 TAB2Q9NYJ8 693 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 ANAPC5Q9UJX4 755 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.83□□□□□ -0.52
GABRB3-204ENST00000541819 PTPN23Q9H3S7 1636 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 LRMPQ12912 555 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 PLBD2Q8NHP8 589 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 Q9H521 79 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 HESX1Q9UBX0 185 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 N4BP1O75113 896 aaKnown RBP11.83□□□□□ -0.52
GABRB3-204ENST00000541819 ARHGAP4P98171 946 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 TNFAIP1Q13829 316 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 ANKRD42Q8N9B4 389 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 CHURC1Q8WUH1 139 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 HDAC11Q96DB2 347 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 TSPYL2Q9H2G4 693 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-204ENST00000541819 KIAA0586Q9BVV6 1533 aa11.83□□□□□ -0.52
GABRB3-204ENST00000541819 PPFIA4O75335 1185 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 CLCN1P35523 988 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 NLRP12P59046 1061 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 DIS3L2Q8IYB7 885 aaKnown RBP11.82□□□□□ -0.52
GABRB3-204ENST00000541819 CCDC13Q8IYE1 715 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 MGARPQ8TDB4 240 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 XAGE2Q96GT9 111 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 LMNB1P20700 586 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 CHMLP26374 656 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 PHLDB3Q6NSJ2 640 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 PNMA8AQ86V59 439 aaPredicted RBP11.82□□□□□ -0.52
GABRB3-204ENST00000541819 APPBP2Q92624 585 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 LSM14BQ9BX40 385 aaKnown RBP11.82□□□□□ -0.52
GABRB3-204ENST00000541819 FAN1Q9Y2M0 1017 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 IBTKQ9P2D0 1353 aaPredicted RBP11.82□□□□□ -0.52
GABRB3-204ENST00000541819 ALDH1B1P30837 517 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 TNNI3KQ59H18 835 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 TMTC4Q5T4D3 741 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 MCTP2Q6DN12 878 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 RINT1Q6NUQ1 792 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
GABRB3-204ENST00000541819 BBS5Q8N3I7 341 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 PCDHB13Q9Y5F0 798 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 FPGT-TNNI3KV9GXZ4 949 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 TESPA1A2RU30 521 aaPredicted RBP11.82□□□□□ -0.52
GABRB3-204ENST00000541819 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 U2AF1L4Q8WU68 220 aaKnown RBP11.82□□□□□ -0.52
GABRB3-204ENST00000541819 TBC1D22AQ8WUA7 517 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 IRAK4Q9NWZ3 460 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 ANGPTL3Q9Y5C1 460 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 LMTK3Q96Q04 1460 aa11.82□□□□□ -0.52
GABRB3-204ENST00000541819 RGS16O15492 202 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-204ENST00000541819 NME8Q8N427 588 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 PDZD8Q8NEN9 1154 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 LRGUKQ96M69 825 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 GBP5Q96PP8 586 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 C1orf112Q9NSG2 853 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.81□□□□□ -0.52
GABRB3-204ENST00000541819 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 LONRF3Q496Y0 759 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 RAB44Q7Z6P3 723 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-204ENST00000541819 KIF9Q9HAQ2 790 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 BTG4Q9NY30 223 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 DISP3Q9P2K9 1392 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 SLC27A2O14975 620 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 PDE6CP51160 858 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 MUM1Q2TAK8 710 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 SESTD1Q86VW0 696 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 GOLGA5Q8TBA6 731 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 FAM89AQ96GI7 184 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 IMPACTQ9P2X3 320 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 IQGAP2Q13576 1575 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 TTC4O95801 387 aa11.81□□□□□ -0.52
GABRB3-204ENST00000541819 U2AF2P26368 475 aaKnown RBP eCLIP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms