RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 FBXO18Q8NFZ0 1043 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 TSC1Q92574 1164 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 MAP3K14Q99558 947 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 MTMR4Q9NYA4 1195 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 CNTNAP1P78357 1384 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 TCHHQ07283 1943 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 IGKV6D-41A0A0C4DH26 115 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 PLEKHA8P1O95397 391 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 DEXIO95424 95 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 EGFRP00533 1210 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 YBX3P16989 372 aaKnown RBP eCLIP10.06□□□□□ -0.8
THBS3-210ENST00000541576 GUCY1A2P33402 732 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 AKAP17AQ02040 695 aaKnown RBP10.06□□□□□ -0.8
THBS3-210ENST00000541576 TATDN1Q6P1N9 297 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 SAMD7Q7Z3H4 446 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 RNF26Q9BY78 433 aaPredicted RBP10.06□□□□□ -0.8
THBS3-210ENST00000541576 ZSCAN16Q9H4T2 348 aaPredicted RBP10.06□□□□□ -0.8
THBS3-210ENST00000541576 SBF1O95248 1867 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 FUT2Q10981 343 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
THBS3-210ENST00000541576 CAVIN1Q6NZI2 390 aaKnown RBP10.05□□□□□ -0.8
THBS3-210ENST00000541576 GPC2Q8N158 579 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 RGS22Q8NE09 1264 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 HERC5Q9UII4 1024 aaKnown RBP10.05□□□□□ -0.8
THBS3-210ENST00000541576 UQCRHLA0A096LP55 91 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 GADD45BO75293 160 aaPredicted RBP10.05□□□□□ -0.8
THBS3-210ENST00000541576 UQCRHP07919 91 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 GRM4Q14833 912 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 PPP4R3BQ5MIZ7 849 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 GPT2Q8TD30 523 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 TMEM39BQ9GZU3 492 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 TFIP11Q9UBB9 837 aaKnown RBP10.05□□□□□ -0.8
THBS3-210ENST00000541576 MTMR7Q9Y216 660 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 BAZ2BQ9UIF8 2168 aaKnown RBP10.05□□□□□ -0.8
THBS3-210ENST00000541576 H7C1D1 291 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 FIBPO43427 364 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 TTLL1O95922 423 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 TPM2P07951 284 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 TNNI2P48788 182 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 TNFAIP1Q13829 316 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 TRIM29Q14134 588 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.05□□□□□ -0.8
THBS3-210ENST00000541576 RNF181Q9P0P0 153 aa10.05□□□□□ -0.8
THBS3-210ENST00000541576 PRPF3O43395 683 aaKnown RBP10.04□□□□□ -0.8
THBS3-210ENST00000541576 GNAQP50148 359 aa10.04□□□□□ -0.8
THBS3-210ENST00000541576 KIF4BQ2VIQ3 1234 aa10.04□□□□□ -0.8
THBS3-210ENST00000541576 SKOR2Q2VWA4 1001 aaPredicted RBP10.04□□□□□ -0.8
THBS3-210ENST00000541576 CLEC10AQ8IUN9 316 aa10.04□□□□□ -0.8
THBS3-210ENST00000541576 SRBD1Q8N5C6 995 aaKnown RBP10.04□□□□□ -0.8
THBS3-210ENST00000541576 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
THBS3-210ENST00000541576 CLIP2Q9UDT6 1046 aa10.04□□□□□ -0.8
THBS3-210ENST00000541576 KRT40Q6A162 431 aa10.04□□□□□ -0.8
THBS3-210ENST00000541576 MAD2L2Q9UI95 211 aa10.04□□□□□ -0.8
THBS3-210ENST00000541576 V9GY48 417 aaPredicted RBP10.04□□□□□ -0.8
THBS3-210ENST00000541576 MYH6P13533 1939 aa10.04□□□□□ -0.8
THBS3-210ENST00000541576 GREB1LQ9C091 1923 aaPredicted RBP10.04□□□□□ -0.8
THBS3-210ENST00000541576 CNTNAP5Q8WYK1 1306 aa10.04□□□□□ -0.8
THBS3-210ENST00000541576 hCG_1642624A0A1W2PR95 340 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 GDF11O95390 407 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 PTMAP06454 111 aaKnown RBP10.03□□□□□ -0.8
THBS3-210ENST00000541576 KRT85P78386 507 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 ATP2B2Q01814 1243 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 MAPK8IP2Q13387 824 aaPredicted RBP10.03□□□□□ -0.8
THBS3-210ENST00000541576 RASA3Q14644 834 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 ABCB5Q2M3G0 1257 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 KLHL40Q2TBA0 621 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 TMEM179Q6ZVK1 233 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 LRRC47Q8N1G4 583 aaKnown RBP10.03□□□□□ -0.8
THBS3-210ENST00000541576 STAG2Q8N3U4 1231 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 GPRC5DQ9NZD1 345 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 PARP1P09874 1014 aaKnown RBP10.03□□□□□ -0.8
THBS3-210ENST00000541576 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 PALM3A6NDB9 673 aaPredicted RBP10.03□□□□□ -0.8
THBS3-210ENST00000541576 KIF28PB7ZC32 967 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 PKN1Q16512 942 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 SHROOM1Q2M3G4 852 aaPredicted RBP10.03□□□□□ -0.8
THBS3-210ENST00000541576 RASGRP2Q7LDG7 609 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 LZTS2Q9BRK4 669 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 CABP5Q9NP86 173 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
THBS3-210ENST00000541576 HACL1Q9UJ83 578 aa10.03□□□□□ -0.8
THBS3-210ENST00000541576 TBC1D12O60347 775 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 GOLGA8HP0CJ92 632 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 XBP1P17861 261 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 KIF23Q02241 960 aaPredicted RBP10.02□□□□□ -0.81
THBS3-210ENST00000541576 SEPT2Q15019 361 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 C9orf131Q5VYM1 1079 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 USP17L2Q6R6M4 530 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 SHISA4Q96DD7 197 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 FTOQ9C0B1 505 aaKnown RBP eCLIP10.02□□□□□ -0.81
THBS3-210ENST00000541576 PGAP2Q9UHJ9 254 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 SCAF8Q9UPN6 1271 aaKnown RBP10.02□□□□□ -0.81
THBS3-210ENST00000541576 ASTN2O75129 1339 aaPredicted RBP10.02□□□□□ -0.81
THBS3-210ENST00000541576 USP17L5A8MUK1 530 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 KLRF2D3W0D1 207 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 GH2P01242 217 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 PDHBP11177 359 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms