RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 SYNRGQ9UMZ2 1314 aa17.06■□□□□ 0.32
VARS2-211ENST00000541562 ZMYND10O75800 440 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 SPECC1LQ69YQ0 1117 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 TC2NQ8N9U0 490 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 KANSL2Q9H9L4 492 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 COL4A1P02462 1669 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 NKRFO15226 690 aaKnown RBP eCLIP17.05■□□□□ 0.32
VARS2-211ENST00000541562 SSBP05455 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
VARS2-211ENST00000541562 FXR1P51114 621 aaKnown RBP eCLIP17.05■□□□□ 0.32
VARS2-211ENST00000541562 SEC23AQ15436 765 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 RAD9BQ6WBX8 426 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 REXO1L1PQ8IX06 675 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 FAM196BA6NMK8 535 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 TSPY3P0CV98 308 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 TSPY8P0CW00 308 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 MDM2Q00987 491 aaPredicted RBP17.05■□□□□ 0.32
VARS2-211ENST00000541562 MCM6Q14566 821 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 BRMS1Q9HCU9 246 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 GUCA1BQ9UMX6 200 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 MYH2Q9UKX2 1941 aa17.05■□□□□ 0.32
VARS2-211ENST00000541562 KLK7P49862 253 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 TROAPQ12815 778 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 IL17AQ16552 155 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 PTPROQ16827 1216 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 KIF4BQ2VIQ3 1234 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 CCDC178Q5BJE1 867 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 NSUN4Q96CB9 384 aaKnown RBP17.04■□□□□ 0.32
VARS2-211ENST00000541562 TMEM60Q9H2L4 133 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 ZNF652Q9Y2D9 606 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 SRPRBQ9Y5M8 271 aaKnown RBP17.04■□□□□ 0.32
VARS2-211ENST00000541562 BAZ2AQ9UIF9 1905 aaKnown RBP17.04■□□□□ 0.32
VARS2-211ENST00000541562 SLIT2O94813 1529 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 ZNF397Q8NF99 534 aaPredicted RBP17.04■□□□□ 0.32
VARS2-211ENST00000541562 BIN2Q9UBW5 565 aaPredicted RBP17.04■□□□□ 0.32
VARS2-211ENST00000541562 TJP1Q07157 1748 aa17.04■□□□□ 0.32
VARS2-211ENST00000541562 C6orf229H3BNL8 230 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 DYMQ7RTS9 669 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 PNMA1Q8ND90 353 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 CRNKL1Q9BZJ0 848 aaKnown RBP17.03■□□□□ 0.32
VARS2-211ENST00000541562 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 STAT6P42226 847 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 TRIM65Q6PJ69 517 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 TAL1P17542 331 aaPredicted RBP17.03■□□□□ 0.32
VARS2-211ENST00000541562 UBXN1Q04323 297 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 ZNF444Q8N0Y2 327 aaPredicted RBP17.03■□□□□ 0.32
VARS2-211ENST00000541562 CHP1Q99653 195 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 FOXP1Q9H334 677 aaPredicted RBP17.03■□□□□ 0.32
VARS2-211ENST00000541562 TBC1D7Q9P0N9 293 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 IMPACTQ9P2X3 320 aa17.03■□□□□ 0.32
VARS2-211ENST00000541562 IKBKBO14920 756 aa17.02■□□□□ 0.32
VARS2-211ENST00000541562 GNAT2P19087 354 aa17.02■□□□□ 0.32
VARS2-211ENST00000541562 TNS2Q63HR2 1409 aa17.02■□□□□ 0.32
VARS2-211ENST00000541562 SRGAP2O75044 1071 aa17.02■□□□□ 0.32
VARS2-211ENST00000541562 PMS1P54277 932 aaKnown RBP17.02■□□□□ 0.32
VARS2-211ENST00000541562 CACNB3P54284 484 aa17.02■□□□□ 0.32
VARS2-211ENST00000541562 LRRC47Q8N1G4 583 aaKnown RBP17.02■□□□□ 0.32
VARS2-211ENST00000541562 MTRQ99707 1265 aa17.02■□□□□ 0.32
VARS2-211ENST00000541562 ZHX3Q9H4I2 956 aa17.02■□□□□ 0.32
VARS2-211ENST00000541562 GPCPD1Q9NPB8 672 aa17.02■□□□□ 0.32
VARS2-211ENST00000541562 TMEM260Q9NX78 707 aa17.02■□□□□ 0.32
VARS2-211ENST00000541562 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
VARS2-211ENST00000541562 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.31
VARS2-211ENST00000541562 SNAP25P60880 206 aa17.02■□□□□ 0.31
VARS2-211ENST00000541562 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.31
VARS2-211ENST00000541562 PARP10Q53GL7 1025 aa17.02■□□□□ 0.31
VARS2-211ENST00000541562 NELFBQ8WX92 580 aa17.02■□□□□ 0.31
VARS2-211ENST00000541562 HDAC6Q9UBN7 1215 aa17.02■□□□□ 0.31
VARS2-211ENST00000541562 AKR1B15C9JRZ8 316 aaPredicted RBP17.01■□□□□ 0.31
VARS2-211ENST00000541562 SCG2P13521 617 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 IDEP14735 1019 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 SCNN1DP51172 638 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 MORC3Q14149 939 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 SMAP1Q8IYB5 467 aaPredicted RBP17.01■□□□□ 0.31
VARS2-211ENST00000541562 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
VARS2-211ENST00000541562 OGFRQ9NZT2 677 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 COL1A1P02452 1464 aaPredicted RBP17.01■□□□□ 0.31
VARS2-211ENST00000541562 TECP42680 631 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 RABEP2Q9H5N1 569 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 DDX41Q9UJV9 622 aaKnown RBP17.01■□□□□ 0.31
VARS2-211ENST00000541562 CEP131Q9UPN4 1083 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 ZNF804BA4D1E1 1349 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 ADAMTSL3P82987 1691 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 GLI3P10071 1580 aa17.01■□□□□ 0.31
VARS2-211ENST00000541562 RFC4P35249 363 aa17■□□□□ 0.31
VARS2-211ENST00000541562 PPP2R3AQ06190 1150 aa17■□□□□ 0.31
VARS2-211ENST00000541562 ALX1Q15699 326 aa17■□□□□ 0.31
VARS2-211ENST00000541562 COA7Q96BR5 231 aa17■□□□□ 0.31
VARS2-211ENST00000541562 XDHP47989 1333 aa17■□□□□ 0.31
VARS2-211ENST00000541562 TXKP42681 527 aa17■□□□□ 0.31
VARS2-211ENST00000541562 MATR3P43243 847 aaKnown RBP eCLIP17■□□□□ 0.31
VARS2-211ENST00000541562 TMTC3Q6ZXV5 915 aa17■□□□□ 0.31
VARS2-211ENST00000541562 NEK11Q8NG66 645 aa17■□□□□ 0.31
VARS2-211ENST00000541562 USP54Q70EL1 1684 aa17■□□□□ 0.31
VARS2-211ENST00000541562 MPHOSPH10O00566 681 aaKnown RBP17■□□□□ 0.31
VARS2-211ENST00000541562 CCNT1O60563 726 aaKnown RBP17■□□□□ 0.31
VARS2-211ENST00000541562 LDHBP07195 334 aaKnown RBP17■□□□□ 0.31
VARS2-211ENST00000541562 SLC16A2P36021 539 aa17■□□□□ 0.31
VARS2-211ENST00000541562 UBA7P41226 1012 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms