RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 RRAGDQ9NQL2 400 aaPredicted RBP10.78□□□□□ -0.68
TTC39C-203ENST00000540918 CDHR2Q9BYE9 1310 aa10.78□□□□□ -0.68
TTC39C-203ENST00000540918 NF2P35240 595 aa10.77□□□□□ -0.68
TTC39C-203ENST00000540918 OXER1Q8TDS5 423 aa10.77□□□□□ -0.68
TTC39C-203ENST00000540918 SPAG5Q96R06 1193 aa10.77□□□□□ -0.68
TTC39C-203ENST00000540918 ZNF609O15014 1411 aa10.77□□□□□ -0.68
TTC39C-203ENST00000540918 GUCY1A2P33402 732 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 LRMPQ12912 555 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 CALCRLQ16602 461 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 HERC4Q5GLZ8 1057 aaPredicted RBP10.77□□□□□ -0.69
TTC39C-203ENST00000540918 DPH6Q7L8W6 267 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 TPH2Q8IWU9 490 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 EHMT1Q9H9B1 1298 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 FLOT1O75955 427 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 YEATS4O95619 227 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 HOXA13P31271 388 aaPredicted RBP10.77□□□□□ -0.69
TTC39C-203ENST00000540918 WWC2Q6AWC2 1192 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 UBXN4Q92575 508 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 FER1L4A9Z1Z3 1794 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 NCOA3Q9Y6Q9 1424 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 TESPA1A2RU30 521 aaPredicted RBP10.77□□□□□ -0.69
TTC39C-203ENST00000540918 GH2P01242 217 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 MYL5Q02045 173 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 GOLGA8FQ08AF8 430 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 GOLGA8DPQ0D2H9 430 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 ZNF771Q7L3S4 317 aaPredicted RBP10.77□□□□□ -0.69
TTC39C-203ENST00000540918 ENAHQ8N8S7 591 aaPredicted RBP10.77□□□□□ -0.69
TTC39C-203ENST00000540918 SUPT20HQ8NEM7 779 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 KIF18AQ8NI77 898 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 VTI1AQ96AJ9 217 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 CSRNP2Q9H175 543 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 TAB2Q9NYJ8 693 aa10.77□□□□□ -0.69
TTC39C-203ENST00000540918 KIF23Q02241 960 aaPredicted RBP10.76□□□□□ -0.69
TTC39C-203ENST00000540918 PRPF4BQ13523 1007 aaKnown RBP10.76□□□□□ -0.69
TTC39C-203ENST00000540918 SNW1Q13573 536 aaKnown RBP10.76□□□□□ -0.69
TTC39C-203ENST00000540918 POSTNQ15063 836 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 CTR9Q6PD62 1173 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 EPSTI1Q96J88 318 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 TTC14Q96N46 770 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 ARGLU1Q9NWB6 273 aaPredicted RBP10.76□□□□□ -0.69
TTC39C-203ENST00000540918 NEMFO60524 1076 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 CUTAO60888 179 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 FAM13AO94988 1023 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 ADALQ6DHV7 355 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 SV2BQ7L1I2 683 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 EEPD1Q7L9B9 569 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 PCDHA5Q9Y5H7 936 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 SMIM22K7EJ46 135 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 SEMA3EO15041 775 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 ECE2O60344 883 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 UVSSAQ2YD98 709 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 TBC1D16Q8TBP0 767 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 TSC1Q92574 1164 aa10.76□□□□□ -0.69
TTC39C-203ENST00000540918 KIAA1210Q9ULL0 1709 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 TMCO5BA8MYB1 307 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 SYMPKQ92797 1274 aaKnown RBP10.75□□□□□ -0.69
TTC39C-203ENST00000540918 RUFY1Q96T51 708 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 ZKSCAN5Q9Y2L8 839 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 POLR1AO95602 1720 aaPredicted RBP10.75□□□□□ -0.69
TTC39C-203ENST00000540918 CCDC169A6NNP5 214 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L5A8MUK1 530 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 KIF5CO60282 957 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 CRKP46108 304 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 CABP7Q86V35 215 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 STAG2Q8N3U4 1231 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 RGS22Q8NE09 1264 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
TTC39C-203ENST00000540918 NRBP1Q9UHY1 535 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 COL9A3Q14050 684 aaPredicted RBP10.75□□□□□ -0.69
TTC39C-203ENST00000540918 SEPT2Q15019 361 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 CC2D2BQ6DHV5 1058 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 PPP4R3AQ6IN85 833 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 NSUN4Q96CB9 384 aaKnown RBP10.75□□□□□ -0.69
TTC39C-203ENST00000540918 CEP95Q96GE4 821 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 RMND1Q9NWS8 449 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 KIAA1468Q9P260 1216 aa10.75□□□□□ -0.69
TTC39C-203ENST00000540918 FAM205CA6NFA0 338 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 PLCD1P51178 756 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 FANCCQ00597 558 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 DPCR1Q3MIW9 517 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 DALRD3Q5D0E6 543 aaKnown RBP10.74□□□□□ -0.69
TTC39C-203ENST00000540918 COL23A1Q86Y22 540 aaPredicted RBP10.74□□□□□ -0.69
TTC39C-203ENST00000540918 TTC16Q8NEE8 873 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 JADE2Q9NQC1 790 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 TMOD4Q9NZQ9 345 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 TERF1P54274 439 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 RAPGEF1Q13905 1077 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 CSGALNACT2Q8N6G5 542 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 GUCA1BQ9UMX6 200 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 MEIS1O00470 390 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 ZSCAN12O43309 604 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 ADKP55263 362 aaKnown RBP10.74□□□□□ -0.69
TTC39C-203ENST00000540918 ZNF445P59923 1031 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 CCDC93Q567U6 631 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 TMEM47Q9BQJ4 181 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 XPO4Q9C0E2 1151 aaKnown RBP10.74□□□□□ -0.69
TTC39C-203ENST00000540918 COA1Q9GZY4 146 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 EPB41L4AQ9HCS5 686 aaPredicted RBP10.74□□□□□ -0.69
TTC39C-203ENST00000540918 SLC39A2Q9NP94 309 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms