RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 CLIC4Q9Y696 253 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 ELP1O95163 1332 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 MMP1P03956 469 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 XBP1P17861 261 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 CXCL9Q07325 125 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 SAFBQ15424 915 aaKnown RBP eCLIP11.03□□□□□ -0.64
PAAF1-209ENST00000540659 PKN1Q16512 942 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 MYSM1Q5VVJ2 828 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 CIAPIN1Q6FI81 312 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 SH3BP5LQ7L8J4 393 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 GAS2L3Q86XJ1 694 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 LRRC47Q8N1G4 583 aaKnown RBP11.03□□□□□ -0.64
PAAF1-209ENST00000540659 L3MBTL3Q96JM7 780 aaPredicted RBP11.03□□□□□ -0.64
PAAF1-209ENST00000540659 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
PAAF1-209ENST00000540659 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
PAAF1-209ENST00000540659 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 VEZTQ9HBM0 779 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 MAD2L2Q9UI95 211 aa11.03□□□□□ -0.64
PAAF1-209ENST00000540659 POTECB2RU33 542 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 BTBD18B2RXH4 712 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 MYO1BO43795 1136 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 TOP1P11387 765 aaKnown RBP11.02□□□□□ -0.65
PAAF1-209ENST00000540659 LIG1P18858 919 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 FUT2Q10981 343 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 STK38Q15208 465 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 SF3A1Q15459 793 aaKnown RBP11.02□□□□□ -0.65
PAAF1-209ENST00000540659 CCDC183Q5T5S1 534 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 L1TD1Q5T7N2 865 aaKnown RBP11.02□□□□□ -0.65
PAAF1-209ENST00000540659 DIS3L2Q8IYB7 885 aaKnown RBP11.02□□□□□ -0.65
PAAF1-209ENST00000540659 AGBL3Q8NEM8 1001 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 SHISA4Q96DD7 197 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 PGBD1Q96JS3 809 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 GMLQ99445 158 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 EHD4Q9H223 541 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 CPVLQ9H3G5 476 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 DNAJC18Q9H819 358 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 PI4KBQ9UBF8 816 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 ZNF70Q9UC06 446 aaPredicted RBP11.02□□□□□ -0.65
PAAF1-209ENST00000540659 CLIP2Q9UDT6 1046 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 GJA3Q9Y6H8 435 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 FRMPD2Q68DX3 1309 aaPredicted RBP11.02□□□□□ -0.65
PAAF1-209ENST00000540659 PLIN4Q96Q06 1357 aa11.02□□□□□ -0.65
PAAF1-209ENST00000540659 SHTN1A0MZ66 631 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 SPDYE2BA6NHP3 402 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 RAD21O60216 631 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 ENTPD3O75355 529 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 GDF11O95390 407 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
PAAF1-209ENST00000540659 SPDYE6P0CI01 402 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 RPS12P25398 132 aaKnown RBP11.01□□□□□ -0.65
PAAF1-209ENST00000540659 KRT2P35908 639 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 ME1P48163 572 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 ZNF445P59923 1031 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 NR5A1Q13285 461 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 SHROOM1Q2M3G4 852 aaPredicted RBP11.01□□□□□ -0.65
PAAF1-209ENST00000540659 CERKLQ49MI3 558 aaPredicted RBP11.01□□□□□ -0.65
PAAF1-209ENST00000540659 RBM26Q5T8P6 1007 aaKnown RBP11.01□□□□□ -0.65
PAAF1-209ENST00000540659 ATL3Q6DD88 541 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 USP17L2Q6R6M4 530 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 GPC2Q8N158 579 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 GPKOWQ92917 476 aaPredicted RBP eCLIP11.01□□□□□ -0.65
PAAF1-209ENST00000540659 MAP3K14Q99558 947 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 MTMR4Q9NYA4 1195 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 RTEL1Q9NZ71 1219 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 RCOR1Q9UKL0 485 aa11.01□□□□□ -0.65
PAAF1-209ENST00000540659 IGKV6D-41A0A0C4DH26 115 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 FSD2A1L4K1 749 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 USP17L5A8MUK1 530 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
PAAF1-209ENST00000540659 SCG2P13521 617 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 VEGFAP15692 232 aaPredicted RBP11□□□□□ -0.65
PAAF1-209ENST00000540659 ATP2B1P20020 1258 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 GNAQP50148 359 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 NLRP5P59047 1200 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 C1QTNF8P60827 252 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 PFKFB3Q16875 520 aaPredicted RBP11□□□□□ -0.65
PAAF1-209ENST00000540659 ANO1Q5XXA6 986 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 LRSAM1Q6UWE0 723 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 NOSTRINQ8IVI9 506 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 CCAR1Q8IX12 1150 aaKnown RBP11□□□□□ -0.65
PAAF1-209ENST00000540659 CSRNP1Q96S65 589 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 PHF20Q9BVI0 1012 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 GRPEL1Q9HAV7 217 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 VAT1LQ9HCJ6 419 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 ISY1Q9ULR0 285 aaKnown RBP11□□□□□ -0.65
PAAF1-209ENST00000540659 SCAF8Q9UPN6 1271 aaKnown RBP11□□□□□ -0.65
PAAF1-209ENST00000540659 ATAD5Q96QE3 1844 aa11□□□□□ -0.65
PAAF1-209ENST00000540659 PALM3A6NDB9 673 aaPredicted RBP10.99□□□□□ -0.65
PAAF1-209ENST00000540659 KLRF2D3W0D1 207 aa10.99□□□□□ -0.65
PAAF1-209ENST00000540659 SPTLC2O15270 562 aa10.99□□□□□ -0.65
PAAF1-209ENST00000540659 YEATS4O95619 227 aa10.99□□□□□ -0.65
PAAF1-209ENST00000540659 TTLL1O95922 423 aa10.99□□□□□ -0.65
PAAF1-209ENST00000540659 U2AF2P26368 475 aaKnown RBP eCLIP10.99□□□□□ -0.65
PAAF1-209ENST00000540659 CAMK4Q16566 473 aa10.99□□□□□ -0.65
PAAF1-209ENST00000540659 SPDYE2Q495Y8 402 aa10.99□□□□□ -0.65
PAAF1-209ENST00000540659 HOMER1Q86YM7 354 aa10.99□□□□□ -0.65
PAAF1-209ENST00000540659 FOXP4Q8IVH2 680 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms