RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 CCT2P78371 535 aaKnown RBP13.9□□□□□ -0.18
CYB561A3-215ENST00000540317 PPATQ06203 517 aa13.9□□□□□ -0.18
CYB561A3-215ENST00000540317 FOXD4L6Q3SYB3 417 aaPredicted RBP13.9□□□□□ -0.18
CYB561A3-215ENST00000540317 FOXD4L3Q6VB84 417 aaPredicted RBP13.9□□□□□ -0.18
CYB561A3-215ENST00000540317 SGMS1Q86VZ5 419 aa13.9□□□□□ -0.18
CYB561A3-215ENST00000540317 TEX11Q8IYF3 940 aa13.9□□□□□ -0.18
CYB561A3-215ENST00000540317 RIOK1Q9BRS2 568 aaKnown RBP13.9□□□□□ -0.18
CYB561A3-215ENST00000540317 B4E1Z4 1266 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 CPLX1O14810 134 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 PPIL2Q13356 520 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 TAF1CQ15572 869 aaPredicted RBP13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 PKN2Q16513 984 aaKnown RBP13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 CYB5R4Q7L1T6 521 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 CERS3Q8IU89 383 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 MIGA1Q8NAN2 632 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 DDX11Q96FC9 970 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 PICK1Q9NRD5 415 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 AATFQ9NY61 560 aaKnown RBP eCLIP13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 CFAP45Q9UL16 551 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
CYB561A3-215ENST00000540317 FIBPO43427 364 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 PRKAB2O43741 272 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 RCAN1P53805 252 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 PPARAQ07869 468 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 RESTQ13127 1097 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 TMEM67Q5HYA8 995 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 SYNE3Q6ZMZ3 975 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 IGDCC4Q8TDY8 1250 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 GDPD2Q9HCC8 539 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 ZFYVE28Q9HCC9 887 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 TMEM63CQ9P1W3 806 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 HPS5Q9UPZ3 1129 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 NEDD4P46934 1319 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 MYH15Q9Y2K3 1946 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 ERICH2A1L162 156 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 PHF20L1A8MW92 1017 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 PLCG2P16885 1265 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 LRSAM1Q6UWE0 723 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 NFXL1Q6ZNB6 911 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 ATP8A2Q9NTI2 1148 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 ZSWIM5Q9P217 1185 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 ZHX2Q9Y6X8 837 aa13.88□□□□□ -0.19
CYB561A3-215ENST00000540317 OTOFQ9HC10 1997 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 BTBD19C9JJ37 291 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 IFIT3O14879 490 aaKnown RBP13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 METAP2P50579 478 aaKnown RBP eCLIP13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 SP3Q02447 781 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 MAP3K10Q02779 954 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 CTDSPL2Q05D32 466 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 NOL9Q5SY16 702 aaKnown RBP13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 CCDC183Q5T5S1 534 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 APOA5Q6Q788 366 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 ADGRA1Q86SQ6 560 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 FERMT3Q86UX7 667 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 GAS2L3Q86XJ1 694 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 TGFBRAP1Q8WUH2 860 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 ESR2Q92731 530 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 ZNF396Q96N95 335 aaPredicted RBP13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 OSBPL5Q9H0X9 879 aaPredicted RBP13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 LY9Q9HBG7 655 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 TRIM17Q9Y577 477 aa13.87□□□□□ -0.19
CYB561A3-215ENST00000540317 FAM196BA6NMK8 535 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 ZBTB43O43298 467 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 CTNND1O60716 968 aaKnown RBP13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 KDM4AO75164 1064 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 GADD45BO75293 160 aaPredicted RBP13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 SLC3A2P08195 630 aaKnown RBP13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 PPP4CP60510 307 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 PPP2R5BQ15173 497 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 SCYL3Q8IZE3 742 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 ANP32BQ92688 251 aaKnown RBP13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 ERO1AQ96HE7 468 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 SPATA32Q96LK8 384 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 GPHNQ9NQX3 736 aaPredicted RBP13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 ORC3Q9UBD5 711 aaPredicted RBP13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 NID2Q14112 1375 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 MAST2Q6P0Q8 1798 aa13.86□□□□□ -0.19
CYB561A3-215ENST00000540317 CCDC196A0A1B0GTZ2 297 aa13.85□□□□□ -0.19
CYB561A3-215ENST00000540317 PTPRAP18433 802 aa13.85□□□□□ -0.19
CYB561A3-215ENST00000540317 FBXO46Q6PJ61 603 aaPredicted RBP13.85□□□□□ -0.19
CYB561A3-215ENST00000540317 MAPKAPK5Q8IW41 473 aa13.85□□□□□ -0.19
CYB561A3-215ENST00000540317 CD99L2Q8TCZ2 262 aa13.85□□□□□ -0.19
CYB561A3-215ENST00000540317 KCNH4Q9UQ05 1017 aa13.85□□□□□ -0.19
CYB561A3-215ENST00000540317 SLC12A7Q9Y666 1083 aa13.85□□□□□ -0.19
CYB561A3-215ENST00000540317 ATRNL1Q5VV63 1379 aa13.85□□□□□ -0.19
CYB561A3-215ENST00000540317 GOLGA6L4A6NEF3 574 aa13.84□□□□□ -0.19
CYB561A3-215ENST00000540317 CXCL11O14625 94 aa13.84□□□□□ -0.19
CYB561A3-215ENST00000540317 TBC1D12O60347 775 aa13.84□□□□□ -0.19
CYB561A3-215ENST00000540317 FGRP09769 529 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms