RNA–Protein interactions for RNA: ENST00000539988.1

AC008115.2-201, humanhuman

TSL 3 BASIC

Gene AC008115.2, Length 241 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008115.2-201ENST00000539988 PRKRIP1Q9H875 184 aaPredicted RBP3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 EHMT1Q9H9B1 1298 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 VTA1Q9NP79 307 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 ARHGEF4Q9NR80 690 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 RASSF1Q9NS23 344 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 SAP30BPQ9UHR5 308 aaKnown RBP3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 RABGEF1Q9UJ41 708 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 GJD2Q9UKL4 321 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 ODF2LQ9ULJ1 636 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 TPCN1Q9ULQ1 816 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 PPM1HQ9ULR3 514 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 CEP131Q9UPN4 1083 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 PCDHB3Q9Y5E6 796 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 HRH3Q9Y5N1 445 aa3.27□□□□□ -1.89
AC008115.2-201ENST00000539988 ITIH6Q6UXX5 1313 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PABPN1LA6NDY0 278 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 M0R2C6 588 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 M0R3H8 397 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ENC1O14682 589 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 AREL1O15033 823 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 SUSD5O60279 629 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PCDHGA12O60330 932 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 TMCC2O75069 709 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 CILPO75339 1184 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PAGE1O75459 146 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 GFPT2O94808 682 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ARIH2O95376 493 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 IL2RAP01589 272 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 HSD3B1P14060 373 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 RHCEP18577 417 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PSMA3P25788 255 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 CHKAP35790 457 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 IL6STP40189 918 aaPredicted RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 IARSP41252 1262 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 MAPK9P45984 424 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 VEGFBP49765 207 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PFKPQ01813 784 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 RHDQ02161 417 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 G3BP1Q13283 466 aaKnown RBP eCLIP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ZNF460Q14592 562 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ZC3H12AQ5D1E8 599 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 DNAJC21Q5F1R6 531 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 RASIP1Q5U651 963 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PEAR1Q5VY43 1037 aaPredicted RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 IQCEQ6IPM2 695 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 TTBK2Q6IQ55 1244 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PDE12Q6L8Q7 609 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 RETSATQ6NUM9 610 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PLBD1Q6P4A8 553 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 TPTE2Q6XPS3 522 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 SYDE1Q6ZW31 735 aaPredicted RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ZNF438Q7Z4V0 828 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 HSCBQ8IWL3 235 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 LMNTD2Q8IXW0 634 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 CMTR2Q8IYT2 770 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 LRRC47Q8N1G4 583 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 OTUD6BQ8N6M0 293 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 LSMEM1Q8N8F7 131 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 APPL2Q8NEU8 664 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 SLC35G2Q8TBE7 412 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 L3MBTL2Q969R5 705 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ISCA1Q9BUE6 129 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 CRB3Q9BUF7 120 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 MENTQ9BUN1 341 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 OXCT2Q9BYC2 517 aaPredicted RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 WDR12Q9GZL7 423 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PDGFDQ9GZP0 370 aaPredicted RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 SMOC1Q9H4F8 434 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 CXorf56Q9H5V9 222 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ELP3Q9H9T3 547 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 EFCC1Q9HA90 598 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ABCB6Q9NP58 842 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ZCCHC17Q9NP64 241 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 LATS2Q9NRM7 1088 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 TMPRSS4Q9NRS4 437 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 ANKEF1Q9NU02 776 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PDP2Q9P2J9 529 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 SALL4Q9UJQ4 1053 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 GIT1Q9Y2X7 761 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PCDHGA9Q9Y5G4 932 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PCDHGA8Q9Y5G5 932 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PCDHGA7Q9Y5G6 932 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PCDHGA6Q9Y5G7 932 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PCDHGA3Q9Y5H0 932 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PCDHGA2Q9Y5H1 932 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 TNPO3Q9Y5L0 923 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 LRRFIP2Q9Y608 721 aaKnown RBP3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 KCNMB2Q9Y691 235 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 PARP3Q9Y6F1 533 aa3.26□□□□□ -1.89
AC008115.2-201ENST00000539988 A0A1W2PQU0 124 aa3.25□□□□□ -1.89
AC008115.2-201ENST00000539988 DDX3YO15523 660 aaKnown RBP3.25□□□□□ -1.89
AC008115.2-201ENST00000539988 ZEB2O60315 1214 aa3.25□□□□□ -1.89
AC008115.2-201ENST00000539988 GRIN3BO60391 1043 aa3.25□□□□□ -1.89
AC008115.2-201ENST00000539988 PLOD3O60568 738 aa3.25□□□□□ -1.89
AC008115.2-201ENST00000539988 KPNA6O60684 536 aa3.25□□□□□ -1.89
AC008115.2-201ENST00000539988 LILRA1O75019 489 aa3.25□□□□□ -1.89
AC008115.2-201ENST00000539988 RNF40O75150 1001 aa3.25□□□□□ -1.89
AC008115.2-201ENST00000539988 SNUPNO95149 360 aaKnown RBP3.25□□□□□ -1.89
AC008115.2-201ENST00000539988 MBD4O95243 580 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms