RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 IL17RBQ9NRM6 502 aa15.9■□□□□ 0.14
PRPF19-204ENST00000539960 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
PRPF19-204ENST00000539960 CDC45O75419 566 aa15.89■□□□□ 0.13
PRPF19-204ENST00000539960 TTLL1O95922 423 aa15.89■□□□□ 0.13
PRPF19-204ENST00000539960 PPP4R3BQ5MIZ7 849 aa15.89■□□□□ 0.13
PRPF19-204ENST00000539960 CASC1Q6TDU7 716 aa15.89■□□□□ 0.13
PRPF19-204ENST00000539960 CTU1Q7Z7A3 348 aaKnown RBP15.89■□□□□ 0.13
PRPF19-204ENST00000539960 RPAP3Q9H6T3 665 aaPredicted RBP15.89■□□□□ 0.13
PRPF19-204ENST00000539960 GOPCQ9HD26 462 aa15.89■□□□□ 0.13
PRPF19-204ENST00000539960 CASP8AP2Q9UKL3 1982 aa15.89■□□□□ 0.13
PRPF19-204ENST00000539960 PLIN4Q96Q06 1357 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 PTPRFP10586 1907 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 F5H6K3 240 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 NT5C2P49902 561 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 HERVK_113P62684 666 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 KLRC3Q07444 240 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 KIF22Q14807 665 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 ARHGEF6Q15052 776 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 SPICE1Q8N0Z3 855 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 CD99L2Q8TCZ2 262 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 LSG1Q9H089 658 aaKnown RBP15.88■□□□□ 0.13
PRPF19-204ENST00000539960 TCP11L1Q9NUJ3 509 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 SYNPO2Q9UMS6 1093 aa15.88■□□□□ 0.13
PRPF19-204ENST00000539960 NMT2O60551 498 aa15.87■□□□□ 0.13
PRPF19-204ENST00000539960 CYP21A2P08686 494 aa15.87■□□□□ 0.13
PRPF19-204ENST00000539960 NOVP48745 357 aa15.87■□□□□ 0.13
PRPF19-204ENST00000539960 LACTBP83111 547 aaPredicted RBP15.87■□□□□ 0.13
PRPF19-204ENST00000539960 CAP1Q01518 475 aa15.87■□□□□ 0.13
PRPF19-204ENST00000539960 COG2Q14746 738 aa15.87■□□□□ 0.13
PRPF19-204ENST00000539960 ANKRD13CQ8N6S4 541 aa15.87■□□□□ 0.13
PRPF19-204ENST00000539960 ESR2Q92731 530 aa15.87■□□□□ 0.13
PRPF19-204ENST00000539960 HOXC10Q9NYD6 342 aa15.87■□□□□ 0.13
PRPF19-204ENST00000539960 WDR46O15213 610 aaKnown RBP15.86■□□□□ 0.13
PRPF19-204ENST00000539960 RAD21O60216 631 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 PKN2Q16513 984 aaKnown RBP15.86■□□□□ 0.13
PRPF19-204ENST00000539960 FAM110CQ1W6H9 321 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 POTEEQ6S8J3 1075 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 TNS4Q8IZW8 715 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 NKX2-3Q8TAU0 364 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 GTF3C2Q8WUA4 911 aaPredicted RBP15.86■□□□□ 0.13
PRPF19-204ENST00000539960 TTC14Q96N46 770 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 KRT23Q9C075 422 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 EFCC1Q9HA90 598 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 RBPJLQ9UBG7 517 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 STX8Q9UNK0 236 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 RBM8AQ9Y5S9 174 aaKnown RBP15.86■□□□□ 0.13
PRPF19-204ENST00000539960 NEDD4P46934 1319 aa15.86■□□□□ 0.13
PRPF19-204ENST00000539960 LOC285556D6RIA3 1793 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 B4E1Z4 1266 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 KDM4AO75164 1064 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 PSMC4P43686 418 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 OTOP1Q7RTM1 612 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 GMCL1P1Q8NEA9 526 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 TANGO6Q9C0B7 1094 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 ARHGAP39Q9C0H5 1083 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 MCOLN1Q9GZU1 580 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 CNNM2Q9H8M5 875 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 ANO2Q9NQ90 1003 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 ZSWIM5Q9P217 1185 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 MORF4L1Q9UBU8 362 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 RABGAP1Q9Y3P9 1069 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 TRIM17Q9Y577 477 aa15.85■□□□□ 0.13
PRPF19-204ENST00000539960 MYH8P13535 1937 aa15.84■□□□□ 0.13
PRPF19-204ENST00000539960 NDUFB10O96000 172 aa15.84■□□□□ 0.13
PRPF19-204ENST00000539960 GNRH1P01148 92 aa15.84■□□□□ 0.13
PRPF19-204ENST00000539960 CTGFP29279 349 aa15.84■□□□□ 0.13
PRPF19-204ENST00000539960 NECTIN1Q15223 517 aa15.84■□□□□ 0.13
PRPF19-204ENST00000539960 LBX2Q6XYB7 198 aa15.84■□□□□ 0.13
PRPF19-204ENST00000539960 LRRC47Q8N1G4 583 aaKnown RBP15.84■□□□□ 0.13
PRPF19-204ENST00000539960 GPRC5AQ8NFJ5 357 aa15.84■□□□□ 0.13
PRPF19-204ENST00000539960 TXNRD2Q9NNW7 524 aa15.84■□□□□ 0.13
PRPF19-204ENST00000539960 SPDYE16A6NNV3 312 aaPredicted RBP15.83■□□□□ 0.12
PRPF19-204ENST00000539960 FLOT1O75955 427 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 ECM2O94769 699 aaPredicted RBP15.83■□□□□ 0.12
PRPF19-204ENST00000539960 FMNL1O95466 1100 aaPredicted RBP15.83■□□□□ 0.12
PRPF19-204ENST00000539960 DSG3P32926 999 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 TRDNQ13061 729 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 Q3C1V9 767 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 CCDC178Q5BJE1 867 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 FAM83BQ5T0W9 1011 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 SLFN13Q68D06 897 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 RCSD1Q6JBY9 416 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 DGKHQ86XP1 1220 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 TRIM47Q96LD4 638 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 NUP88Q99567 741 aaPredicted RBP15.83■□□□□ 0.12
PRPF19-204ENST00000539960 TAF6LQ9Y6J9 622 aa15.83■□□□□ 0.12
PRPF19-204ENST00000539960 GREB1LQ9C091 1923 aaPredicted RBP15.83■□□□□ 0.12
PRPF19-204ENST00000539960 E7EWF7 191 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 PEX10O60683 326 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 TOP1P11387 765 aaKnown RBP15.82■□□□□ 0.12
PRPF19-204ENST00000539960 HOXD10P28358 340 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 FCGRTP55899 365 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 FBXO46Q6PJ61 603 aaPredicted RBP15.82■□□□□ 0.12
PRPF19-204ENST00000539960 IQCA1Q86XH1 822 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 ANKS1AQ92625 1134 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 GMCL1Q96IK5 515 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 TMEM47Q9BQJ4 181 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 ZKSCAN3Q9BRR0 538 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 PAGR1Q9BTK6 254 aa15.82■□□□□ 0.12
PRPF19-204ENST00000539960 FBXO28Q9NVF7 368 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms