RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
SLC3A2-215ENST00000539891 IGKV6D-41A0A0C4DH26 115 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 SLC3A2P08195 630 aaKnown RBP12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 GRK4P32298 578 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 FLT3LGP49771 235 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 ERVK-9P63128 1117 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 ERVK-24P63145 666 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 MLLT1Q03111 559 aaPredicted RBP12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 PDE4BQ07343 736 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 PPARAQ07869 468 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 NMIQ13287 307 aaPredicted RBP12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 KIAA1755Q5JYT7 1200 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 PXYLP1Q8TE99 480 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 NYAP2Q9P242 653 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 PDE4DIPQ5VU43 2346 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 COL11A1P12107 1806 aaPredicted RBP12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 ZMYM6O95789 1325 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 SPDYE16A6NNV3 312 aaPredicted RBP12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 SDSP20132 328 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 PDE4AP27815 886 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 COG2Q14746 738 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 Q3C1V9 767 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 VPS53Q5VIR6 699 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 ZNF444Q8N0Y2 327 aaPredicted RBP12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 SH3TC2Q8TF17 1288 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 GJD2Q9UKL4 321 aa12.88□□□□□ -0.35
SLC3A2-215ENST00000539891 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 LAMA4Q16363 1823 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 HIP1O00291 1037 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 PEX10O60683 326 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 CNMDO75829 334 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 HSPD1P10809 573 aaKnown RBP12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 MAPK4P31152 587 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 ZNF589Q86UQ0 364 aaPredicted RBP12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 STK11IPQ8N1F8 1099 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 MKL1Q969V6 931 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 GOPCQ9HD26 462 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 HOXC10Q9NYD6 342 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
SLC3A2-215ENST00000539891 CCDC171Q6TFL3 1326 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 ADCY3O60266 1144 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 PRDM1O75626 825 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 FGAP02671 866 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 FGRP09769 529 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 DSG3P32926 999 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 CCNA1P78396 465 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 TTC22Q5TAA0 569 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 SPICE1Q8N0Z3 855 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 PAGR1Q9BTK6 254 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
SLC3A2-215ENST00000539891 ORC4O43929 436 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 TSPY3P0CV98 308 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 TSPY8P0CW00 308 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 ATP2B2Q01814 1243 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 MB21D1Q8N884 522 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 SOCS4Q8WXH5 440 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 PORCNQ9H237 461 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 MTMR4Q9NYA4 1195 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 BTBD7Q9P203 1132 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 ADAMTS5Q9UNA0 930 aa12.85□□□□□ -0.35
SLC3A2-215ENST00000539891 ZNF236Q9UL36 1845 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 FLOT1O75955 427 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 TTLL1O95922 423 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 XRCC5P13010 732 aaKnown RBP12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 GSPT1P15170 499 aaKnown RBP12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 UBXN2AP68543 259 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 TFAP4Q01664 338 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 CTDSPL2Q05D32 466 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 MTFR1Q15390 333 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 MORN1Q5T089 497 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 CWC27Q6UX04 472 aaKnown RBP12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 GPR142Q7Z601 462 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 USP6NLQ92738 828 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 CEP95Q96GE4 821 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 NUDT12Q9BQG2 462 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 CLIP2Q9UDT6 1046 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
SLC3A2-215ENST00000539891 F5H6K3 240 aa12.83□□□□□ -0.36
SLC3A2-215ENST00000539891 PCP11498 1178 aaKnown RBP12.83□□□□□ -0.36
SLC3A2-215ENST00000539891 ELNP15502 786 aa12.83□□□□□ -0.36
SLC3A2-215ENST00000539891 KLRC3Q07444 240 aa12.83□□□□□ -0.36
SLC3A2-215ENST00000539891 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
SLC3A2-215ENST00000539891 PLEKHH3Q7Z736 793 aa12.83□□□□□ -0.36
SLC3A2-215ENST00000539891 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
SLC3A2-215ENST00000539891 GMCL1P1Q8NEA9 526 aa12.83□□□□□ -0.36
SLC3A2-215ENST00000539891 BIN2Q9UBW5 565 aaPredicted RBP12.83□□□□□ -0.36
SLC3A2-215ENST00000539891 NDUFB10O96000 172 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 HMGCRP04035 888 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms