RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CBX7O95931 251 aa9.97□□□□□ -0.81
TRAV11-201ENST00000539512 EOMESO95936 686 aa9.97□□□□□ -0.81
TRAV11-201ENST00000539512 TP53P04637 393 aaPredicted RBP9.97□□□□□ -0.81
TRAV11-201ENST00000539512 TDRD10Q5VZ19 366 aaKnown RBP9.97□□□□□ -0.81
TRAV11-201ENST00000539512 KIAA1211LQ6NV74 962 aa9.97□□□□□ -0.81
TRAV11-201ENST00000539512 CELF2-AS1Q8N7Q2 184 aa9.97□□□□□ -0.81
TRAV11-201ENST00000539512 SHKBP1Q8TBC3 707 aa9.97□□□□□ -0.81
TRAV11-201ENST00000539512 ASCC2Q9H1I8 757 aaPredicted RBP9.97□□□□□ -0.81
TRAV11-201ENST00000539512 LTBP3Q9NS15 1303 aa9.97□□□□□ -0.81
TRAV11-201ENST00000539512 FAM155AB1AL88 458 aaPredicted RBP9.96□□□□□ -0.82
TRAV11-201ENST00000539512 PROCP04070 461 aa9.96□□□□□ -0.82
TRAV11-201ENST00000539512 F13BP05160 661 aa9.96□□□□□ -0.82
TRAV11-201ENST00000539512 IFRD2Q12894 506 aaPredicted RBP9.96□□□□□ -0.82
TRAV11-201ENST00000539512 CPSF6Q16630 551 aaKnown RBP eCLIP9.96□□□□□ -0.82
TRAV11-201ENST00000539512 EEPD1Q7L9B9 569 aa9.96□□□□□ -0.82
TRAV11-201ENST00000539512 SLC51AQ86UW1 340 aa9.96□□□□□ -0.82
TRAV11-201ENST00000539512 LRRC4CQ9HCJ2 640 aa9.96□□□□□ -0.82
TRAV11-201ENST00000539512 FBXL21Q9UKT6 434 aa9.96□□□□□ -0.82
TRAV11-201ENST00000539512 LEMD3Q9Y2U8 911 aa9.96□□□□□ -0.82
TRAV11-201ENST00000539512 GJB6O95452 261 aa9.95□□□□□ -0.82
TRAV11-201ENST00000539512 KIR3DL1P43629 444 aa9.95□□□□□ -0.82
TRAV11-201ENST00000539512 TCEAL1Q15170 157 aa9.95□□□□□ -0.82
TRAV11-201ENST00000539512 HEATR6Q6AI08 1181 aaKnown RBP9.95□□□□□ -0.82
TRAV11-201ENST00000539512 GATA6Q92908 595 aa9.95□□□□□ -0.82
TRAV11-201ENST00000539512 MKL1Q969V6 931 aa9.95□□□□□ -0.82
TRAV11-201ENST00000539512 GBP3Q9H0R5 595 aa9.95□□□□□ -0.82
TRAV11-201ENST00000539512 B2RBV5 119 aa9.94□□□□□ -0.82
TRAV11-201ENST00000539512 NBPF12Q5TAG4 269 aaPredicted RBP9.94□□□□□ -0.82
TRAV11-201ENST00000539512 DEPDC7Q96QD5 511 aa9.94□□□□□ -0.82
TRAV11-201ENST00000539512 IGF2BP3O00425 579 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRAV11-201ENST00000539512 SERINC3Q13530 473 aa9.93□□□□□ -0.82
TRAV11-201ENST00000539512 RSPO4Q2I0M5 234 aaPredicted RBP9.93□□□□□ -0.82
TRAV11-201ENST00000539512 LRP10Q7Z4F1 713 aa9.93□□□□□ -0.82
TRAV11-201ENST00000539512 MFSD4AQ8N468 514 aa9.93□□□□□ -0.82
TRAV11-201ENST00000539512 FBXL18Q96ME1 805 aa9.93□□□□□ -0.82
TRAV11-201ENST00000539512 PCDHB12Q9Y5F1 795 aa9.93□□□□□ -0.82
TRAV11-201ENST00000539512 AGRPO00253 132 aa9.92□□□□□ -0.82
TRAV11-201ENST00000539512 DYRK3O43781 588 aa9.92□□□□□ -0.82
TRAV11-201ENST00000539512 ITIH2P19823 946 aa9.92□□□□□ -0.82
TRAV11-201ENST00000539512 CLEC16AQ2KHT3 1053 aa9.92□□□□□ -0.82
TRAV11-201ENST00000539512 NKAPLQ5M9Q1 402 aa9.92□□□□□ -0.82
TRAV11-201ENST00000539512 NOL9Q5SY16 702 aaKnown RBP9.92□□□□□ -0.82
TRAV11-201ENST00000539512 ADAT2Q7Z6V5 191 aaKnown RBP9.92□□□□□ -0.82
TRAV11-201ENST00000539512 PPP1R14AQ96A00 147 aa9.92□□□□□ -0.82
TRAV11-201ENST00000539512 HAUS7Q99871 368 aa9.92□□□□□ -0.82
TRAV11-201ENST00000539512 CCDC113Q9H0I3 377 aa9.92□□□□□ -0.82
TRAV11-201ENST00000539512 CDK11AQ9UQ88 783 aaPredicted RBP9.92□□□□□ -0.82
TRAV11-201ENST00000539512 ANKRD34BA5PLL1 514 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 C9IYK1 514 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 PDPK1O15530 556 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 CYP26A1O43174 497 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 MTERF2Q49AM1 385 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 NOP9Q86U38 636 aaKnown RBP9.91□□□□□ -0.82
TRAV11-201ENST00000539512 PPFIBP1Q86W92 1011 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 MICAL1Q8TDZ2 1067 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 APBA2Q99767 749 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 SNTG2Q9NY99 539 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 SUGT1Q9Y2Z0 365 aa9.91□□□□□ -0.82
TRAV11-201ENST00000539512 ITGA4P13612 1032 aa9.9□□□□□ -0.82
TRAV11-201ENST00000539512 ZNF143P52747 638 aaPredicted RBP9.9□□□□□ -0.82
TRAV11-201ENST00000539512 AUHQ13825 339 aaKnown RBP9.9□□□□□ -0.82
TRAV11-201ENST00000539512 DCAF15Q66K64 600 aa9.9□□□□□ -0.82
TRAV11-201ENST00000539512 C7orf61Q8IZ16 206 aa9.9□□□□□ -0.82
TRAV11-201ENST00000539512 SHISA5Q8N114 240 aa9.9□□□□□ -0.82
TRAV11-201ENST00000539512 KLHL6Q8WZ60 621 aa9.9□□□□□ -0.82
TRAV11-201ENST00000539512 HEXIM2Q96MH2 286 aaKnown RBP9.9□□□□□ -0.82
TRAV11-201ENST00000539512 CWC22Q9HCG8 908 aaKnown RBP9.9□□□□□ -0.82
TRAV11-201ENST00000539512 PIM2Q9P1W9 311 aa9.9□□□□□ -0.82
TRAV11-201ENST00000539512 LRP2BPQ9P2M1 347 aa9.9□□□□□ -0.82
TRAV11-201ENST00000539512 PPM1BO75688 479 aa9.89□□□□□ -0.83
TRAV11-201ENST00000539512 FURINP09958 794 aa9.89□□□□□ -0.83
TRAV11-201ENST00000539512 NBPF9Q3BBW0 867 aa9.89□□□□□ -0.83
TRAV11-201ENST00000539512 SV2CQ496J9 727 aa9.89□□□□□ -0.83
TRAV11-201ENST00000539512 AXDND1Q5T1B0 1012 aaPredicted RBP9.89□□□□□ -0.83
TRAV11-201ENST00000539512 C22orf34Q6ZV56 151 aa9.89□□□□□ -0.83
TRAV11-201ENST00000539512 FAM181AQ8N9Y4 354 aa9.89□□□□□ -0.83
TRAV11-201ENST00000539512 DTWD2Q8NBA8 298 aa9.89□□□□□ -0.83
TRAV11-201ENST00000539512 PIWIL2Q8TC59 973 aaKnown RBP9.89□□□□□ -0.83
TRAV11-201ENST00000539512 EPN3Q9H201 632 aa9.89□□□□□ -0.83
TRAV11-201ENST00000539512 SEMA6BQ9H3T3 888 aa9.89□□□□□ -0.83
TRAV11-201ENST00000539512 SUSD5O60279 629 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 LRRN2O75325 713 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 EPHX1P07099 455 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 ZNF865P0CJ78 1059 aaPredicted RBP9.88□□□□□ -0.83
TRAV11-201ENST00000539512 GRIK1P39086 918 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 RASGRF1Q13972 1273 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 ST13P5Q8NFI4 369 aaPredicted RBP9.88□□□□□ -0.83
TRAV11-201ENST00000539512 DSCC1Q9BVC3 393 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 TRIT1Q9H3H1 467 aaKnown RBP9.88□□□□□ -0.83
TRAV11-201ENST00000539512 MKNK2Q9HBH9 465 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 GPATCH2Q9NW75 528 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 WHRNQ9P202 907 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 MSRB2Q9Y3D2 182 aa9.88□□□□□ -0.83
TRAV11-201ENST00000539512 IQCA1LA6NCM1 817 aa9.87□□□□□ -0.83
TRAV11-201ENST00000539512 CEACAM5P06731 702 aa9.87□□□□□ -0.83
TRAV11-201ENST00000539512 ANKRD39Q53RE8 183 aa9.87□□□□□ -0.83
TRAV11-201ENST00000539512 FAM214BQ7L5A3 538 aa9.87□□□□□ -0.83
TRAV11-201ENST00000539512 CAPN6Q9Y6Q1 641 aa9.87□□□□□ -0.83
TRAV11-201ENST00000539512 NOP56O00567 594 aaKnown RBP9.86□□□□□ -0.83
TRAV11-201ENST00000539512 CD247P20963 164 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms