RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 SPEF2Q9C093 1822 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 A0A0D9SFI3 127 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 CIAO1O76071 339 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 ATG7O95352 703 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 HMGB1P09429 215 aaKnown RBP6.86□□□□□ -1.31
KNTC1-210ENST00000539013 RPS6KB1P23443 525 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 GJB2P29033 226 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 MCM5P33992 734 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 FOXO4P98177 505 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 TFCP2Q12800 502 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 DPYDQ12882 1025 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 PTK7Q13308 1070 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 LRRFIP1Q32MZ4 808 aaKnown RBP6.86□□□□□ -1.31
KNTC1-210ENST00000539013 ADCK5Q3MIX3 580 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 TBCELQ5QJ74 424 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 CCDC183Q5T5S1 534 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 TOM1L2Q6ZVM7 507 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 USP48Q86UV5 1035 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 ZSCAN30Q86W11 494 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 KBTBD3Q8NAB2 608 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 DDX17Q92841 729 aaKnown RBP6.86□□□□□ -1.31
KNTC1-210ENST00000539013 FAM227BQ96M60 508 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 HAUS7Q99871 368 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 TSPAN10Q9H1Z9 355 aaPredicted RBP6.86□□□□□ -1.31
KNTC1-210ENST00000539013 PRDM6Q9NQX0 595 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 HELLSQ9NRZ9 838 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 TLR7Q9NYK1 1049 aaKnown RBP6.86□□□□□ -1.31
KNTC1-210ENST00000539013 DBNLQ9UJU6 430 aaKnown RBP6.86□□□□□ -1.31
KNTC1-210ENST00000539013 NOVA2Q9UNW9 492 aaKnown RBP6.86□□□□□ -1.31
KNTC1-210ENST00000539013 ABCC12Q96J65 1359 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 NUP188Q5SRE5 1749 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 ELP1O95163 1332 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 SYCE3A1L190 88 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 TAF5LO75529 589 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 MSNP26038 577 aaKnown RBP6.85□□□□□ -1.31
KNTC1-210ENST00000539013 TRIM28Q13263 835 aaKnown RBP6.85□□□□□ -1.31
KNTC1-210ENST00000539013 ELOAQ14241 798 aaKnown RBP6.85□□□□□ -1.31
KNTC1-210ENST00000539013 MCMDC2Q4G0Z9 681 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 CRTC2Q53ET0 693 aaPredicted RBP6.85□□□□□ -1.31
KNTC1-210ENST00000539013 LMBR1LQ6UX01 489 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 CCDC83Q8IWF9 413 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 FOXD4L4Q8WXT5 416 aaPredicted RBP6.85□□□□□ -1.31
KNTC1-210ENST00000539013 TRIM11Q96F44 468 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 DSCC1Q9BVC3 393 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 PLA2G12BQ9BX93 195 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 PLVAPQ9BX97 442 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 RBSNQ9H1K0 784 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 EFCC1Q9HA90 598 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.85□□□□□ -1.31
KNTC1-210ENST00000539013 MTMR6Q9Y217 621 aa6.85□□□□□ -1.31
KNTC1-210ENST00000539013 XIRP1Q702N8 1843 aaKnown RBP6.85□□□□□ -1.31
KNTC1-210ENST00000539013 ABCA3Q99758 1704 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 SFI1A8K8P3 1242 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 EYA2O00167 538 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 LARGE1O95461 756 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 KRT85P78386 507 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 SFSWAPQ12872 951 aaKnown RBP6.84□□□□□ -1.31
KNTC1-210ENST00000539013 ME3Q16798 604 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 LARP1BQ659C4 914 aaKnown RBP6.84□□□□□ -1.31
KNTC1-210ENST00000539013 VTI1AQ96AJ9 217 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 NEK1Q96PY6 1258 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 LLPHQ9BRT6 129 aaKnown RBP6.84□□□□□ -1.31
KNTC1-210ENST00000539013 ISCA1Q9BUE6 129 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 PHACTR1Q9C0D0 580 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 BRD7Q9NPI1 651 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 SLAIN2Q9P270 581 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 TPCN1Q9ULQ1 816 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 NOL7Q9UMY1 257 aaKnown RBP6.84□□□□□ -1.31
KNTC1-210ENST00000539013 AKAP2Q9Y2D5 859 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 KIF3AQ9Y496 699 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.84□□□□□ -1.31
KNTC1-210ENST00000539013 TJP1Q07157 1748 aa6.84□□□□□ -1.31
KNTC1-210ENST00000539013 ZNF609O15014 1411 aa6.84□□□□□ -1.32
KNTC1-210ENST00000539013 PTCD1O75127 700 aaKnown RBP6.83□□□□□ -1.32
KNTC1-210ENST00000539013 GADD45BO75293 160 aaPredicted RBP6.83□□□□□ -1.32
KNTC1-210ENST00000539013 DKK1O94907 266 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 PCCAP05165 728 aaPredicted RBP6.83□□□□□ -1.32
KNTC1-210ENST00000539013 FURINP09958 794 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 CHRNA4P43681 627 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 TERF1P54274 439 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 SPEM2Q0P670 501 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 TOB2Q14106 344 aaPredicted RBP6.83□□□□□ -1.32
KNTC1-210ENST00000539013 HSP90AB3PQ58FF7 597 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 PRRT3Q5FWE3 981 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 ZMYM1Q5SVZ6 1142 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 SH3PXD2AQ5TCZ1 1133 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 ATG9AQ7Z3C6 839 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 ZNF589Q86UQ0 364 aaPredicted RBP6.83□□□□□ -1.32
KNTC1-210ENST00000539013 KLHDC4Q8TBB5 520 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 CEP63Q96MT8 703 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 DBNDD2Q9BQY9 259 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 SCAND2PQ9GZW5 306 aaPredicted RBP6.83□□□□□ -1.32
KNTC1-210ENST00000539013 PAG1Q9NWQ8 432 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 CCDC39Q9UFE4 941 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 KCNH4Q9UQ05 1017 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 CNPY2Q9Y2B0 182 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 SHANK3Q9BYB0 1731 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 LRP6O75581 1613 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 NHSL1Q5SYE7 1610 aa6.83□□□□□ -1.32
KNTC1-210ENST00000539013 CDHR2Q9BYE9 1310 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms