RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 PLXNA1Q9UIW2 1896 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 ZNFX1Q9P2E3 1918 aaKnown RBP10.41□□□□□ -0.74
DDB1-212ENST00000538470 PEX10O60683 326 aa10.41□□□□□ -0.74
DDB1-212ENST00000538470 HOXC6P09630 235 aa10.41□□□□□ -0.74
DDB1-212ENST00000538470 PTPREP23469 700 aa10.41□□□□□ -0.74
DDB1-212ENST00000538470 ICA1Q05084 483 aa10.41□□□□□ -0.74
DDB1-212ENST00000538470 MFSD14CQ5VZR4 134 aa10.41□□□□□ -0.74
DDB1-212ENST00000538470 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
DDB1-212ENST00000538470 SHCBP1Q8NEM2 672 aa10.41□□□□□ -0.74
DDB1-212ENST00000538470 DIS3LQ8TF46 1054 aaKnown RBP10.41□□□□□ -0.74
DDB1-212ENST00000538470 RBM27Q9P2N5 1060 aaKnown RBP10.41□□□□□ -0.74
DDB1-212ENST00000538470 ARPP21Q9UBL0 812 aaPredicted RBP10.41□□□□□ -0.74
DDB1-212ENST00000538470 ROBO3Q96MS0 1386 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 A0A1W2PRG0 241 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 MSCO60682 206 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 CYP2D6P10635 497 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 MNX1P50219 401 aaPredicted RBP10.4□□□□□ -0.74
DDB1-212ENST00000538470 EVX2Q03828 476 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 CACNB2Q08289 660 aaPredicted RBP10.4□□□□□ -0.74
DDB1-212ENST00000538470 COG2Q14746 738 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 CCL14Q16627 93 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 C12orf60Q5U649 245 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 SLC44A5Q8NCS7 719 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 TANGO6Q9C0B7 1094 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 ECHDC1Q9NTX5 307 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 HOXC10Q9NYD6 342 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 BTBD7Q9P203 1132 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 TMX2Q9Y320 296 aa10.4□□□□□ -0.74
DDB1-212ENST00000538470 WDR46O15213 610 aaKnown RBP10.39□□□□□ -0.75
DDB1-212ENST00000538470 PRKAB2O43741 272 aa10.39□□□□□ -0.75
DDB1-212ENST00000538470 AKR1B1P15121 316 aa10.39□□□□□ -0.75
DDB1-212ENST00000538470 C20orf194Q5TEA3 1177 aa10.39□□□□□ -0.75
DDB1-212ENST00000538470 WDR78Q5VTH9 848 aa10.39□□□□□ -0.75
DDB1-212ENST00000538470 GIMAP6Q6P9H5 292 aa10.39□□□□□ -0.75
DDB1-212ENST00000538470 SPATC1LQ9H0A9 340 aa10.39□□□□□ -0.75
DDB1-212ENST00000538470 VCPKMTQ9H867 229 aa10.39□□□□□ -0.75
DDB1-212ENST00000538470 SLC4A4Q9Y6R1 1079 aa10.39□□□□□ -0.75
DDB1-212ENST00000538470 PFASO15067 1338 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 USP17L12C9JPN9 530 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 USP17L21D6R901 530 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 STRNO43815 780 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 FLOT1O75955 427 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 ZFYP08048 801 aaPredicted RBP10.38□□□□□ -0.75
DDB1-212ENST00000538470 COL6A1P12109 1028 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 CCND3P30281 292 aaPredicted RBP10.38□□□□□ -0.75
DDB1-212ENST00000538470 DSG3P32926 999 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 CDK8P49336 464 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 LRRFIP1Q32MZ4 808 aaKnown RBP10.38□□□□□ -0.75
DDB1-212ENST00000538470 SBK1Q52WX2 424 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 OLFML2BQ68BL8 750 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 LHX8Q68G74 356 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 C7orf61Q8IZ16 206 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 ABRAQ8N0Z2 381 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 KBTBD3Q8NAB2 608 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 APPBP2Q92624 585 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 DYNLL2Q96FJ2 89 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 MOV10L1Q9BXT6 1211 aaKnown RBP10.38□□□□□ -0.75
DDB1-212ENST00000538470 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 MROH8Q9H579 483 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 DCTPP1Q9H773 170 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 SLC5A4Q9NY91 659 aa10.38□□□□□ -0.75
DDB1-212ENST00000538470 LTBP2Q14767 1821 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 SMARCA5O60264 1052 aaPredicted RBP10.37□□□□□ -0.75
DDB1-212ENST00000538470 IGHA2P01877 340 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 GNAT2P19087 354 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 ADORA2AP29274 412 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 BMP8BP34820 402 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 SLFNL1Q499Z3 407 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 CTR9Q6PD62 1173 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 PPP4R3CPQ6ZMV5 832 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 YTHDC1Q96MU7 727 aaKnown RBP10.37□□□□□ -0.75
DDB1-212ENST00000538470 PUS7LQ9H0K6 701 aaKnown RBP10.37□□□□□ -0.75
DDB1-212ENST00000538470 KANSL2Q9H9L4 492 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 FLRT1Q9NZU1 646 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 DDX20Q9UHI6 824 aaKnown RBP10.37□□□□□ -0.75
DDB1-212ENST00000538470 SZT2Q5T011 3432 aa10.37□□□□□ -0.75
DDB1-212ENST00000538470 TTC41PQ6P2S7 1318 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 CYP2D7A0A087X1C5 515 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 SLC25A27O95847 323 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 CHGBP05060 677 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 CYBAP13498 195 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 ERCC3P19447 782 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 COPB2P35606 906 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 KIAA1755Q5JYT7 1200 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 DPP9Q86TI2 863 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 CLEC10AQ8IUN9 316 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 SIAH1Q8IUQ4 282 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 NPLOC4Q8TAT6 608 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 ATG4CQ96DT6 458 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 STRBPQ96SI9 672 aaKnown RBP10.36□□□□□ -0.75
DDB1-212ENST00000538470 GDF15Q99988 308 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 ZNF287Q9HBT7 754 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 SYNPO2Q9UMS6 1093 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 PLIN4Q96Q06 1357 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 LAMA3Q16787 3333 aa10.36□□□□□ -0.75
DDB1-212ENST00000538470 DNM1LO00429 736 aa10.35□□□□□ -0.75
DDB1-212ENST00000538470 ERC2O15083 957 aa10.35□□□□□ -0.75
DDB1-212ENST00000538470 RNF113AO15541 343 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms