RNA–Protein interactions for RNA: ENST00000538413.5

LRTOMT-214, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2

Gene LRTOMT, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-214ENST00000538413 ERCC3P19447 782 aa17.03■□□□□ 0.32
LRTOMT-214ENST00000538413 SHMT1P34896 483 aa17.03■□□□□ 0.32
LRTOMT-214ENST00000538413 LRRC41Q15345 812 aa17.03■□□□□ 0.32
LRTOMT-214ENST00000538413 MAGEB6Q8N7X4 407 aa17.03■□□□□ 0.32
LRTOMT-214ENST00000538413 FERMT2Q96AC1 680 aa17.03■□□□□ 0.32
LRTOMT-214ENST00000538413 TANGO6Q9C0B7 1094 aa17.03■□□□□ 0.32
LRTOMT-214ENST00000538413 SPATC1LQ9H0A9 340 aa17.03■□□□□ 0.32
LRTOMT-214ENST00000538413 TRIM43BA6NCK2 446 aa17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 COBLO75128 1261 aa17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 SURF6O75683 361 aaKnown RBP17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 TLE2Q04725 743 aa17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 POLA2Q14181 598 aa17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 SEPT2Q15019 361 aa17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 C1orf53Q5VUE5 145 aa17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 SH3RF1Q7Z6J0 888 aa17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 FRAT1Q92837 279 aaPredicted RBP17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 TRIM43Q96BQ3 446 aaPredicted RBP17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 MROH8Q9H579 483 aa17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 DBNLQ9UJU6 430 aaKnown RBP17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 TACC3Q9Y6A5 838 aa17.02■□□□□ 0.32
LRTOMT-214ENST00000538413 TMEM265A0A087WTH1 108 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 MPHOSPH10O00566 681 aaKnown RBP17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 GUCY1A2P33402 732 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 PLCD1P51178 756 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 MAP3K12Q12852 859 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 PLS1Q14651 629 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 PRAMEF19Q5SWL8 479 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 MB21D1Q8N884 522 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 SSH3Q8TE77 659 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 RNPC3Q96LT9 517 aaKnown RBP17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 RLFQ13129 1914 aa17.01■□□□□ 0.31
LRTOMT-214ENST00000538413 MUC3AQ02505 3323 aa17■□□□□ 0.31
LRTOMT-214ENST00000538413 MYH1P12882 1939 aa17■□□□□ 0.31
LRTOMT-214ENST00000538413 FAM47AQ5JRC9 791 aa17■□□□□ 0.31
LRTOMT-214ENST00000538413 NCAPG2Q86XI2 1143 aa17■□□□□ 0.31
LRTOMT-214ENST00000538413 ABRAQ8N0Z2 381 aa17■□□□□ 0.31
LRTOMT-214ENST00000538413 CCDC8Q9H0W5 538 aaPredicted RBP17■□□□□ 0.31
LRTOMT-214ENST00000538413 TLR7Q9NYK1 1049 aaKnown RBP17■□□□□ 0.31
LRTOMT-214ENST00000538413 TNNQ9UQP3 1299 aa17■□□□□ 0.31
LRTOMT-214ENST00000538413 ZNF236Q9UL36 1845 aa16.99■□□□□ 0.31
LRTOMT-214ENST00000538413 A0A1W2PRG0 241 aa16.99■□□□□ 0.31
LRTOMT-214ENST00000538413 CLTBP09497 229 aa16.99■□□□□ 0.31
LRTOMT-214ENST00000538413 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
LRTOMT-214ENST00000538413 MAML3Q96JK9 1138 aa16.99■□□□□ 0.31
LRTOMT-214ENST00000538413 XPNPEP3Q9NQH7 507 aa16.99■□□□□ 0.31
LRTOMT-214ENST00000538413 PHF24Q9UPV7 400 aa16.99■□□□□ 0.31
LRTOMT-214ENST00000538413 BCAR3O75815 825 aa16.98■□□□□ 0.31
LRTOMT-214ENST00000538413 RARBP10826 455 aa16.98■□□□□ 0.31
LRTOMT-214ENST00000538413 FCER1AP12319 257 aa16.98■□□□□ 0.31
LRTOMT-214ENST00000538413 RAG1P15918 1043 aa16.98■□□□□ 0.31
LRTOMT-214ENST00000538413 DSG3P32926 999 aa16.98■□□□□ 0.31
LRTOMT-214ENST00000538413 GABPAQ06546 454 aa16.98■□□□□ 0.31
LRTOMT-214ENST00000538413 RNF180Q86T96 592 aa16.98■□□□□ 0.31
LRTOMT-214ENST00000538413 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
LRTOMT-214ENST00000538413 MYO5AQ9Y4I1 1855 aaKnown RBP16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 MAGEB6P1A0A0J9YX57 407 aa16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 KIAA0355O15063 1070 aa16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 FLOT1O75955 427 aa16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 ITGB8P26012 769 aa16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 EAF2Q96CJ1 260 aaPredicted RBP16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 RIOK1Q9BRS2 568 aaKnown RBP16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 CRNKL1Q9BZJ0 848 aaKnown RBP16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 ANTXR1Q9H6X2 564 aa16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 MCM9Q9NXL9 1143 aa16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 NOP58Q9Y2X3 529 aaKnown RBP16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 BDP1A6H8Y1 2624 aa16.97■□□□□ 0.31
LRTOMT-214ENST00000538413 PQBP1O60828 265 aaKnown RBP16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 SLC25A27O95847 323 aa16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 EPHB4P54760 987 aa16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 FPGSQ05932 587 aa16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 TJAP1Q5JTD0 557 aa16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 TMEM179Q6ZVK1 233 aa16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 ATG4CQ96DT6 458 aa16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 SH2D4AQ9H788 454 aa16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 TMEM39AQ9NV64 488 aa16.96■□□□□ 0.31
LRTOMT-214ENST00000538413 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.95■□□□□ 0.3
LRTOMT-214ENST00000538413 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.95■□□□□ 0.3
LRTOMT-214ENST00000538413 PGK1P00558 417 aa16.95■□□□□ 0.3
LRTOMT-214ENST00000538413 GRIN2CQ14957 1233 aa16.95■□□□□ 0.3
LRTOMT-214ENST00000538413 KIAA1755Q5JYT7 1200 aa16.95■□□□□ 0.3
LRTOMT-214ENST00000538413 ARHGEF10LQ9HCE6 1279 aa16.95■□□□□ 0.3
LRTOMT-214ENST00000538413 NCOR1O75376 2440 aa16.95■□□□□ 0.3
LRTOMT-214ENST00000538413 A0A1W2PQ45 241 aaPredicted RBP16.94■□□□□ 0.3
LRTOMT-214ENST00000538413 A0A1W2PQY0 241 aa16.94■□□□□ 0.3
LRTOMT-214ENST00000538413 DNAJB2P25686 324 aa16.94■□□□□ 0.3
LRTOMT-214ENST00000538413 SPICE1Q8N0Z3 855 aa16.94■□□□□ 0.3
LRTOMT-214ENST00000538413 MMP19Q99542 508 aa16.94■□□□□ 0.3
LRTOMT-214ENST00000538413 TINF2Q9BSI4 451 aa16.94■□□□□ 0.3
LRTOMT-214ENST00000538413 C1orf115Q9H7X2 142 aa16.94■□□□□ 0.3
LRTOMT-214ENST00000538413 SWAP70Q9UH65 585 aa16.94■□□□□ 0.3
LRTOMT-214ENST00000538413 TNFRSF10AO00220 468 aa16.93■□□□□ 0.3
LRTOMT-214ENST00000538413 PGK2P07205 417 aa16.93■□□□□ 0.3
LRTOMT-214ENST00000538413 EVX2Q03828 476 aa16.93■□□□□ 0.3
LRTOMT-214ENST00000538413 KCTD2Q14681 263 aa16.93■□□□□ 0.3
LRTOMT-214ENST00000538413 TMEM132BQ14DG7 1078 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms