RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
CLPB-208ENST00000538021 CERKLQ49MI3 558 aaPredicted RBP13.66□□□□□ -0.22
CLPB-208ENST00000538021 PRDM12Q9H4Q4 367 aa13.66□□□□□ -0.22
CLPB-208ENST00000538021 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
CLPB-208ENST00000538021 XPNPEP3Q9NQH7 507 aa13.66□□□□□ -0.22
CLPB-208ENST00000538021 PHF24Q9UPV7 400 aa13.66□□□□□ -0.22
CLPB-208ENST00000538021 RARBP10826 455 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 USP5P45974 858 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 DYNLL1P63167 89 aaKnown RBP13.65□□□□□ -0.22
CLPB-208ENST00000538021 PLS1Q14651 629 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 ALDH1L2Q3SY69 923 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 TATDN1Q6P1N9 297 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 RNF180Q86T96 592 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 NCAPG2Q86XI2 1143 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 SPATC1LQ9H0A9 340 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 SERPINB13Q9UIV8 391 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 CDK5RAP2Q96SN8 1893 aa13.65□□□□□ -0.22
CLPB-208ENST00000538021 GRXCR1A8MXD5 290 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 PGK1P00558 417 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 IGFBP4P22692 258 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 PBX2P40425 430 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 COG2Q14746 738 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 TTC39AQ5SRH9 613 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 AKNAD1Q5T1N1 836 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 SLC44A5Q8NCS7 719 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 MAML3Q96JK9 1138 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.64□□□□□ -0.237e-6■□□□□ 9.4
CLPB-208ENST00000538021 PBX4Q9BYU1 374 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 HOXC10Q9NYD6 342 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
CLPB-208ENST00000538021 FOCADQ5VW36 1801 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
CLPB-208ENST00000538021 A0A1W2PQ45 241 aaPredicted RBP13.63□□□□□ -0.23
CLPB-208ENST00000538021 A0A1W2PQY0 241 aa13.63□□□□□ -0.23
CLPB-208ENST00000538021 E9PSI1 815 aa13.63□□□□□ -0.23
CLPB-208ENST00000538021 FAAP100Q0VG06 881 aa13.63□□□□□ -0.23
CLPB-208ENST00000538021 G3BP1Q13283 466 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLPB-208ENST00000538021 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
CLPB-208ENST00000538021 SHCBP1Q8NEM2 672 aa13.63□□□□□ -0.23
CLPB-208ENST00000538021 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 ZNF236Q9UL36 1845 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 DCDC2CA8MYV0 355 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 TIMP1P01033 207 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 CYP2E1P05181 493 aaPredicted RBP13.62□□□□□ -0.23
CLPB-208ENST00000538021 CYP7A1P22680 504 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 HOXD11P31277 338 aaPredicted RBP13.62□□□□□ -0.23
CLPB-208ENST00000538021 CCDC158Q5M9N0 1113 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 MIGA1Q8NAN2 632 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 NECAB3Q96P71 396 aaPredicted RBP13.62□□□□□ -0.23
CLPB-208ENST00000538021 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
CLPB-208ENST00000538021 MROH8Q9H579 483 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 STARD7Q9NQZ5 370 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 SMCHD1A6NHR9 2005 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 MYH1P12882 1939 aa13.62□□□□□ -0.23
CLPB-208ENST00000538021 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
CLPB-208ENST00000538021 ANP32CO43423 234 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 GNAI3P08754 354 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 FCER1AP12319 257 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 ADGRE1Q14246 886 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 SEPT2Q15019 361 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 CCDC174Q6PII3 467 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 TTC6Q86TZ1 520 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 ABRAQ8N0Z2 381 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 TOX2Q96NM4 488 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 C1QTNF1Q9BXJ1 281 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 EHD4Q9H223 541 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
CLPB-208ENST00000538021 PLXNA1Q9UIW2 1896 aa13.61□□□□□ -0.23
CLPB-208ENST00000538021 NCOR1O75376 2440 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 CHD9Q3L8U1 2897 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 A0A1W2PRG0 241 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 GUCY1A2P33402 732 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 SHMT1P34896 483 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 ZAP70P43403 619 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 PPIGQ13427 754 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLPB-208ENST00000538021 MTX1Q13505 466 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 TMEM240Q5SV17 173 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 MFSD5Q6N075 450 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 ANKRD33Q7Z3H0 272 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 NUP133Q8WUM0 1156 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 LENG1Q96BZ8 264 aaPredicted RBP13.6□□□□□ -0.23
CLPB-208ENST00000538021 CDCA7LQ96GN5 454 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 DBNDD2Q9BQY9 259 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
CLPB-208ENST00000538021 NRBP1Q9UHY1 535 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 BDP1A6H8Y1 2624 aa13.6□□□□□ -0.23
CLPB-208ENST00000538021 REV3LO60673 3130 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 APBB1O00213 710 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
CLPB-208ENST00000538021 FLOT1O75955 427 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 PGK2P07205 417 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 ACRP10323 421 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 AKR1A1P14550 325 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 TAL1P17542 331 aaPredicted RBP13.59□□□□□ -0.23
CLPB-208ENST00000538021 DSG3P32926 999 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 PLCD1P51178 756 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 ACLYP53396 1101 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 C16orf59Q7L2K0 433 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 MB21D1Q8N884 522 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms