RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 ZMYND8Q9ULU4 1186 aaPredicted RBP10.22□□□□□ -0.77
USP28-203ENST00000537490 MYH1P12882 1939 aa10.22□□□□□ -0.77
USP28-203ENST00000537490 SLC15A5A6NIM6 579 aa10.21□□□□□ -0.77
USP28-203ENST00000537490 GLRX3O76003 335 aaKnown RBP10.21□□□□□ -0.77
USP28-203ENST00000537490 AKR1B1P15121 316 aa10.21□□□□□ -0.77
USP28-203ENST00000537490 COG2Q14746 738 aa10.21□□□□□ -0.77
USP28-203ENST00000537490 C12orf60Q5U649 245 aa10.21□□□□□ -0.77
USP28-203ENST00000537490 TMEM179Q6ZVK1 233 aa10.21□□□□□ -0.77
USP28-203ENST00000537490 CLEC10AQ8IUN9 316 aa10.21□□□□□ -0.77
USP28-203ENST00000537490 NPLOC4Q8TAT6 608 aa10.21□□□□□ -0.77
USP28-203ENST00000537490 CHMP4BQ9H444 224 aaKnown RBP10.21□□□□□ -0.77
USP28-203ENST00000537490 ATP8A2Q9NTI2 1148 aa10.21□□□□□ -0.77
USP28-203ENST00000537490 SWAP70Q9UH65 585 aa10.21□□□□□ -0.77
USP28-203ENST00000537490 PFASO15067 1338 aa10.21□□□□□ -0.78
USP28-203ENST00000537490 USP17L12C9JPN9 530 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 USP17L21D6R901 530 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 HOXC6P09630 235 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 COL6A1P12109 1028 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 SYN1P17600 705 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 CDK8P49336 464 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 GRB14Q14449 540 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 UBE3CQ15386 1083 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 MFSD14CQ5VZR4 134 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 GDF15Q99988 308 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 MOV10L1Q9BXT6 1211 aaKnown RBP10.2□□□□□ -0.78
USP28-203ENST00000537490 LRRCC1Q9C099 1032 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.78
USP28-203ENST00000537490 PUS7LQ9H0K6 701 aaKnown RBP10.2□□□□□ -0.78
USP28-203ENST00000537490 HOXC10Q9NYD6 342 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 TMX2Q9Y320 296 aa10.2□□□□□ -0.78
USP28-203ENST00000537490 A0A1W2PPC1 479 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 SOX1O00570 391 aaPredicted RBP10.19□□□□□ -0.78
USP28-203ENST00000537490 IGHA2P01877 340 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 DSG3P32926 999 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 CYP2C19P33261 490 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 ATP2B2Q01814 1243 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 SPICE1Q8N0Z3 855 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 TRPV1Q8NER1 839 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 CCDC17Q96LX7 622 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 TANGO6Q9C0B7 1094 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 SPATC1LQ9H0A9 340 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 VCPKMTQ9H867 229 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 SLC4A4Q9Y6R1 1079 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 IVNS1ABPQ9Y6Y0 642 aa10.19□□□□□ -0.78
USP28-203ENST00000537490 DDX60LQ5H9U9 1706 aaKnown RBP10.19□□□□□ -0.78
USP28-203ENST00000537490 ERCC3P19447 782 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 ADORA2AP29274 412 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 CNGA1P29973 690 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 BMP8BP34820 402 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 ICA1Q05084 483 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 LRRC26Q2I0M4 334 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 CTR9Q6PD62 1173 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 C16orf86Q6ZW13 317 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 LPAR1Q92633 364 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 ATG4CQ96DT6 458 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 LRCH3Q96II8 777 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 ARHGEF10LQ9HCE6 1279 aa10.18□□□□□ -0.78
USP28-203ENST00000537490 ALPK3Q96L96 1907 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 STRNO43815 780 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 COBLO75128 1261 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 FLOT1O75955 427 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 EEF2P13639 858 aaKnown RBP10.17□□□□□ -0.78
USP28-203ENST00000537490 MAGEA10P43363 369 aaPredicted RBP10.17□□□□□ -0.78
USP28-203ENST00000537490 PLS1Q14651 629 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 ZSCAN25Q6NSZ9 544 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
USP28-203ENST00000537490 DPP9Q86TI2 863 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 AMOTL1Q8IY63 956 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 SHCBP1Q8NEM2 672 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 STRBPQ96SI9 672 aaKnown RBP10.17□□□□□ -0.78
USP28-203ENST00000537490 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.17□□□□□ -0.78
USP28-203ENST00000537490 DCTPP1Q9H773 170 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 ECHDC1Q9NTX5 307 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 DDX20Q9UHI6 824 aaKnown RBP10.17□□□□□ -0.78
USP28-203ENST00000537490 NAV1Q8NEY1 1877 aa10.17□□□□□ -0.78
USP28-203ENST00000537490 GSG1L2A8MUP6 293 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 WDR46O15213 610 aaKnown RBP10.16□□□□□ -0.78
USP28-203ENST00000537490 CYBAP13498 195 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 TMEM132BQ14DG7 1078 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 PRAMEF19Q5SWL8 479 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 TSHZ3Q63HK5 1081 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 NCAPG2Q86XI2 1143 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 STK11IPQ8N1F8 1099 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 MB21D1Q8N884 522 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 KBTBD3Q8NAB2 608 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 OSBP2Q969R2 916 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 DDRGK1Q96HY6 314 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 SENP6Q9GZR1 1112 aaPredicted RBP10.16□□□□□ -0.78
USP28-203ENST00000537490 SH2D4AQ9H788 454 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 KANSL2Q9H9L4 492 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 FBXO28Q9NVF7 368 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 ADAMTS5Q9UNA0 930 aa10.16□□□□□ -0.78
USP28-203ENST00000537490 MSCO60682 206 aa10.15□□□□□ -0.78
USP28-203ENST00000537490 SBK1Q52WX2 424 aa10.15□□□□□ -0.78
USP28-203ENST00000537490 ANO1Q5XXA6 986 aa10.15□□□□□ -0.78
USP28-203ENST00000537490 OLFML2BQ68BL8 750 aa10.15□□□□□ -0.78
USP28-203ENST00000537490 MROH8Q9H579 483 aa10.15□□□□□ -0.78
USP28-203ENST00000537490 ARPP21Q9UBL0 812 aaPredicted RBP10.15□□□□□ -0.78
USP28-203ENST00000537490 MINDY4BA8MYZ0 360 aa10.14□□□□□ -0.79
USP28-203ENST00000537490 DNM1LO00429 736 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms