RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 VIPAS39Q9H9C1 493 aa13.69□□□□□ -0.22
PTCD2-211ENST00000536805 IQSEC3Q9UPP2 1182 aaPredicted RBP13.69□□□□□ -0.22
PTCD2-211ENST00000536805 RRP15Q9Y3B9 282 aaKnown RBP13.69□□□□□ -0.22
PTCD2-211ENST00000536805 MYH8P13535 1937 aa13.69□□□□□ -0.22
PTCD2-211ENST00000536805 MCM3P25205 808 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 KRT31Q15323 416 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 ANKRD20A12PQ8NF67 263 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 EPSTI1Q96J88 318 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
PTCD2-211ENST00000536805 PHF20Q9BVI0 1012 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 ARMT1Q9H993 441 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 MKRN1Q9UHC7 482 aaKnown RBP13.68□□□□□ -0.22
PTCD2-211ENST00000536805 RWDD2AQ9UIY3 292 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 CTNND2Q9UQB3 1225 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 FAN1Q9Y2M0 1017 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 MROH5Q6ZUA9 1318 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 MYH2Q9UKX2 1941 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 TDO2P48775 406 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 COPB1P53618 953 aaKnown RBP13.68□□□□□ -0.22
PTCD2-211ENST00000536805 AKAP17AQ02040 695 aaKnown RBP13.68□□□□□ -0.22
PTCD2-211ENST00000536805 MYO6Q9UM54 1294 aa13.68□□□□□ -0.22
PTCD2-211ENST00000536805 N4BP3O15049 544 aa13.67□□□□□ -0.22
PTCD2-211ENST00000536805 RHOXF2BP0C7M4 288 aa13.67□□□□□ -0.22
PTCD2-211ENST00000536805 SLC5A1P13866 664 aa13.67□□□□□ -0.22
PTCD2-211ENST00000536805 ATF3P18847 181 aa13.67□□□□□ -0.22
PTCD2-211ENST00000536805 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
PTCD2-211ENST00000536805 AARSP49588 968 aaKnown RBP eCLIP13.67□□□□□ -0.22
PTCD2-211ENST00000536805 RRP12Q5JTH9 1297 aaKnown RBP13.67□□□□□ -0.22
PTCD2-211ENST00000536805 CTCFLQ8NI51 663 aaPredicted RBP13.67□□□□□ -0.22
PTCD2-211ENST00000536805 RHOXF2Q9BQY4 288 aa13.67□□□□□ -0.22
PTCD2-211ENST00000536805 MYH13Q9UKX3 1938 aa13.67□□□□□ -0.22
PTCD2-211ENST00000536805 IRS4O14654 1257 aaPredicted RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 PRPF3O43395 683 aaKnown RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 PDE8AO60658 829 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 SEC23AQ15436 765 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 TRAPPC11Q7Z392 1133 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 CCDC148Q8NFR7 591 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 SHISA4Q96DD7 197 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 BRMS1Q9HCU9 246 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 LCMT1Q9UIC8 334 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 ZNF330Q9Y3S2 320 aaPredicted RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 XDHP47989 1333 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 PSMD14O00487 310 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 GTPBP6O43824 516 aaPredicted RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 N4BP1O75113 896 aaKnown RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 CCT6AP40227 531 aaKnown RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 ATP2C1P98194 919 aaPredicted RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 PAK1Q13153 545 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 RASGRF1Q13972 1273 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 E2F4Q16254 413 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 PKN1Q16512 942 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 MAP9Q49MG5 647 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 NOM1Q5C9Z4 860 aaKnown RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 ZNF662Q6ZS27 426 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 SMYD4Q8IYR2 804 aaPredicted RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 SYNE4Q8N205 404 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 NUP88Q99567 741 aaPredicted RBP13.66□□□□□ -0.22
PTCD2-211ENST00000536805 ZKSCAN3Q9BRR0 538 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 EFCC1Q9HA90 598 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 SUGCTQ9HAC7 445 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 SLC4A4Q9Y6R1 1079 aa13.66□□□□□ -0.22
PTCD2-211ENST00000536805 COL5A2P05997 1499 aaPredicted RBP13.65□□□□□ -0.22
PTCD2-211ENST00000536805 DLEC1Q9Y238 1755 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.65□□□□□ -0.22
PTCD2-211ENST00000536805 FAM205CA6NFA0 338 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 IL2RBP14784 551 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 FUT2Q10981 343 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 TCP11X2Q5H9J9 407 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 TOM1L2Q6ZVM7 507 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
PTCD2-211ENST00000536805 LCORLQ8N3X6 602 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 NOA1Q8NC60 698 aaKnown RBP13.65□□□□□ -0.22
PTCD2-211ENST00000536805 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 CCDC102AQ96A19 550 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 HAUS4Q9H6D7 363 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 RBM28Q9NW13 759 aaKnown RBP13.65□□□□□ -0.22
PTCD2-211ENST00000536805 RMND1Q9NWS8 449 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 VPS54Q9P1Q0 977 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 ANAPC4Q9UJX5 808 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
PTCD2-211ENST00000536805 TARSL2A2RTX5 802 aaKnown RBP13.64□□□□□ -0.23
PTCD2-211ENST00000536805 VGLL3A8MV65 326 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 KCNJ18B7U540 433 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 PRKAB2O43741 272 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 STARD3NLO95772 234 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 CASP1P29466 404 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 USP14P54578 494 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 PPARAQ07869 468 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 KCNJ12Q14500 433 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 TTC38Q5R3I4 469 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 RRAGBQ5VZM2 374 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 PDXDC2PQ6P474 469 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms