RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 STAP2Q9UGK3 403 aa17.9■□□□□ 0.46
UBC-204ENST00000536661 TMX2Q9Y320 296 aa17.9■□□□□ 0.46
UBC-204ENST00000536661 MINDY4BA8MYZ0 360 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 RASA1P20936 1047 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 TDO2P48775 406 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 GPR142Q7Z601 462 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 SMC5Q8IY18 1101 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 NKX2-3Q8TAU0 364 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 SOCS4Q8WXH5 440 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.89■□□□□ 0.45
UBC-204ENST00000536661 TANGO6Q9C0B7 1094 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 LNPKQ9C0E8 428 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 VCPKMTQ9H867 229 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 BTBD7Q9P203 1132 aa17.89■□□□□ 0.45
UBC-204ENST00000536661 ZNF236Q9UL36 1845 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 HMGCRP04035 888 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 APPP05067 770 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 EEF2P13639 858 aaKnown RBP17.88■□□□□ 0.45
UBC-204ENST00000536661 CYP2B6P20813 491 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 UBE2Q1Q7Z7E8 422 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 CCAR1Q8IX12 1150 aaKnown RBP17.88■□□□□ 0.45
UBC-204ENST00000536661 SPICE1Q8N0Z3 855 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 U2AF1L4Q8WU68 220 aaKnown RBP17.88■□□□□ 0.45
UBC-204ENST00000536661 TRIB2Q92519 343 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 LPAR1Q92633 364 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 NUDT12Q9BQG2 462 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 SH2D4AQ9H788 454 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 FRMPD3Q5JV73 1810 aa17.88■□□□□ 0.45
UBC-204ENST00000536661 PATL2C9JE40 543 aaKnown RBP17.87■□□□□ 0.45
UBC-204ENST00000536661 CCNA1P78396 465 aa17.87■□□□□ 0.45
UBC-204ENST00000536661 ATP2B2Q01814 1243 aa17.87■□□□□ 0.45
UBC-204ENST00000536661 TRIM32Q13049 653 aa17.87■□□□□ 0.45
UBC-204ENST00000536661 MORN1Q5T089 497 aa17.87■□□□□ 0.45
UBC-204ENST00000536661 PLEKHH3Q7Z736 793 aa17.87■□□□□ 0.45
UBC-204ENST00000536661 IFNL3Q8IZI9 196 aa17.87■□□□□ 0.45
UBC-204ENST00000536661 USP6NLQ92738 828 aa17.87■□□□□ 0.45
UBC-204ENST00000536661 EVI5LQ96CN4 794 aa17.87■□□□□ 0.45
UBC-204ENST00000536661 KANSL2Q9H9L4 492 aa17.87■□□□□ 0.45
UBC-204ENST00000536661 PAK6Q9NQU5 681 aaPredicted RBP17.87■□□□□ 0.45
UBC-204ENST00000536661 WDR46O15213 610 aaKnown RBP17.86■□□□□ 0.45
UBC-204ENST00000536661 IGHDP01880 384 aa17.86■□□□□ 0.45
UBC-204ENST00000536661 COG2Q14746 738 aa17.86■□□□□ 0.45
UBC-204ENST00000536661 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
UBC-204ENST00000536661 CCDC129Q6ZRS4 1044 aa17.86■□□□□ 0.45
UBC-204ENST00000536661 DEFB118Q96PH6 123 aa17.86■□□□□ 0.45
UBC-204ENST00000536661 RWDD1Q9H446 243 aaPredicted RBP17.86■□□□□ 0.45
UBC-204ENST00000536661 MKNK2Q9HBH9 465 aa17.86■□□□□ 0.45
UBC-204ENST00000536661 FOXP2O15409 715 aa17.85■□□□□ 0.45
UBC-204ENST00000536661 SGPL1O95470 568 aa17.85■□□□□ 0.45
UBC-204ENST00000536661 XRCC5P13010 732 aaKnown RBP17.85■□□□□ 0.45
UBC-204ENST00000536661 WDR78Q5VTH9 848 aa17.85■□□□□ 0.45
UBC-204ENST00000536661 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.85■□□□□ 0.452e-7■□□□□ 11.2
UBC-204ENST00000536661 NAPBQ9H115 298 aa17.85■□□□□ 0.45
UBC-204ENST00000536661 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
UBC-204ENST00000536661 ZNFX1Q9P2E3 1918 aaKnown RBP17.85■□□□□ 0.45
UBC-204ENST00000536661 SUPT16HQ9Y5B9 1047 aaKnown RBP17.85■□□□□ 0.45
UBC-204ENST00000536661 ALPK3Q96L96 1907 aa17.84■□□□□ 0.45
UBC-204ENST00000536661 PRDM1O75626 825 aa17.84■□□□□ 0.45
UBC-204ENST00000536661 FLOT1O75955 427 aa17.84■□□□□ 0.45
UBC-204ENST00000536661 RGS2P41220 211 aa17.84■□□□□ 0.45
UBC-204ENST00000536661 ATG4CQ96DT6 458 aa17.84■□□□□ 0.45
UBC-204ENST00000536661 APBA2Q99767 749 aa17.84■□□□□ 0.45
UBC-204ENST00000536661 NACAP1Q9BZK3 213 aa17.84■□□□□ 0.45
UBC-204ENST00000536661 GOPCQ9HD26 462 aa17.84■□□□□ 0.45
UBC-204ENST00000536661 HOXC10Q9NYD6 342 aa17.84■□□□□ 0.45
UBC-204ENST00000536661 RPTORQ8N122 1335 aa17.83■□□□□ 0.44
UBC-204ENST00000536661 IGKV6D-41A0A0C4DH26 115 aa17.83■□□□□ 0.44
UBC-204ENST00000536661 ZKSCAN1P17029 563 aaPredicted RBP17.83■□□□□ 0.44
UBC-204ENST00000536661 PTPREP23469 700 aa17.83■□□□□ 0.44
UBC-204ENST00000536661 DSG3P32926 999 aa17.83■□□□□ 0.44
UBC-204ENST00000536661 CCL14Q16627 93 aa17.83■□□□□ 0.44
UBC-204ENST00000536661 MAP3K21Q5TCX8 1036 aa17.83■□□□□ 0.44
UBC-204ENST00000536661 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.44
UBC-204ENST00000536661 MOV10L1Q9BXT6 1211 aaKnown RBP17.83■□□□□ 0.44
UBC-204ENST00000536661 CRISPLD2Q9H0B8 497 aa17.83■□□□□ 0.44
UBC-204ENST00000536661 PLXNA1Q9UIW2 1896 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 PLIN4Q96Q06 1357 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 FARP2O94887 1054 aaPredicted RBP17.82■□□□□ 0.44
UBC-204ENST00000536661 PRKAR2AP13861 404 aaKnown RBP17.82■□□□□ 0.44
UBC-204ENST00000536661 NUCB1Q02818 461 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 PPARAQ07869 468 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 MAP2K5Q13163 448 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
UBC-204ENST00000536661 ZNF444Q8N0Y2 327 aaPredicted RBP17.82■□□□□ 0.44
UBC-204ENST00000536661 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 SPATC1LQ9H0A9 340 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 ZNF287Q9HBT7 754 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 HMX1Q9NP08 348 aaPredicted RBP17.82■□□□□ 0.44
UBC-204ENST00000536661 FBXO28Q9NVF7 368 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 NYAP2Q9P242 653 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 IVNS1ABPQ9Y6Y0 642 aa17.82■□□□□ 0.44
UBC-204ENST00000536661 A0A0D9SFI3 127 aa17.81■□□□□ 0.44
UBC-204ENST00000536661 SLC15A5A6NIM6 579 aa17.81■□□□□ 0.44
UBC-204ENST00000536661 RAD21O60216 631 aa17.81■□□□□ 0.44
UBC-204ENST00000536661 GRB14Q14449 540 aa17.81■□□□□ 0.44
UBC-204ENST00000536661 FAM83BQ5T0W9 1011 aa17.81■□□□□ 0.44
UBC-204ENST00000536661 VPS53Q5VIR6 699 aa17.81■□□□□ 0.44
UBC-204ENST00000536661 TRMT44Q8IYL2 757 aaKnown RBP17.81■□□□□ 0.44
UBC-204ENST00000536661 MB21D1Q8N884 522 aa17.81■□□□□ 0.44
UBC-204ENST00000536661 LAMA4Q16363 1823 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms