RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CABP5Q9NP86 173 aa14.98□□□□□ -0.01
PRKDC-207ENST00000536483 ZFYP08048 801 aaPredicted RBP14.97□□□□□ -0.01
PRKDC-207ENST00000536483 COL6A1P12109 1028 aa14.97□□□□□ -0.01
PRKDC-207ENST00000536483 SHMT1P34896 483 aa14.97□□□□□ -0.01
PRKDC-207ENST00000536483 CCNA1P78396 465 aa14.97□□□□□ -0.01
PRKDC-207ENST00000536483 FLRT1Q9NZU1 646 aa14.97□□□□□ -0.01
PRKDC-207ENST00000536483 BTBD7Q9P203 1132 aa14.97□□□□□ -0.01
PRKDC-207ENST00000536483 MBD4O95243 580 aa14.96□□□□□ -0.01
PRKDC-207ENST00000536483 POLR3DP05423 398 aaPredicted RBP14.96□□□□□ -0.01
PRKDC-207ENST00000536483 PTPREP23469 700 aa14.96□□□□□ -0.01
PRKDC-207ENST00000536483 GUCY1A2P33402 732 aa14.96□□□□□ -0.01
PRKDC-207ENST00000536483 EVX2Q03828 476 aa14.96□□□□□ -0.01
PRKDC-207ENST00000536483 GIMAP6Q6P9H5 292 aa14.96□□□□□ -0.01
PRKDC-207ENST00000536483 PUS7LQ9H0K6 701 aaKnown RBP14.96□□□□□ -0.01
PRKDC-207ENST00000536483 RWDD1Q9H446 243 aaPredicted RBP14.96□□□□□ -0.01
PRKDC-207ENST00000536483 ARMT1Q9H993 441 aa14.96□□□□□ -0.01
PRKDC-207ENST00000536483 MCM9Q9NXL9 1143 aa14.96□□□□□ -0.01
PRKDC-207ENST00000536483 SLC15A5A6NIM6 579 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 SPDYE16A6NNV3 312 aaPredicted RBP14.95□□□□□ -0.02
PRKDC-207ENST00000536483 RNF113AO15541 343 aaKnown RBP14.95□□□□□ -0.02
PRKDC-207ENST00000536483 MX1P20591 662 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 SEPT2Q15019 361 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 LRRC26Q2I0M4 334 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 LRRFIP1Q32MZ4 808 aaKnown RBP14.95□□□□□ -0.02
PRKDC-207ENST00000536483 SLFNL1Q499Z3 407 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 MFSD14CQ5VZR4 134 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 LBX2Q6XYB7 198 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 TDHQ8IZJ6 230 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 SLC17A8Q8NDX2 589 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 OTUD7AQ8TE49 926 aaPredicted RBP14.95□□□□□ -0.02
PRKDC-207ENST00000536483 SDR42E1Q8WUS8 393 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 APPBP2Q92624 585 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 STRBPQ96SI9 672 aaKnown RBP14.95□□□□□ -0.02
PRKDC-207ENST00000536483 UBE2OQ9C0C9 1292 aaKnown RBP14.95□□□□□ -0.02
PRKDC-207ENST00000536483 RPAP3Q9H6T3 665 aaPredicted RBP14.95□□□□□ -0.02
PRKDC-207ENST00000536483 SWAP70Q9UH65 585 aa14.95□□□□□ -0.02
PRKDC-207ENST00000536483 PRKAB2O43741 272 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 CHGBP05060 677 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 LRIT3Q3SXY7 679 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 ANKRD45Q5TZF3 282 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 C12orf60Q5U649 245 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 TSHZ3Q63HK5 1081 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 NPLOC4Q8TAT6 608 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 OSBP2Q969R2 916 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 IVNS1ABPQ9Y6Y0 642 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 A0A0C4DFX4 3053 aa14.94□□□□□ -0.02
PRKDC-207ENST00000536483 A0A1W2PRG0 241 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 MPHOSPH10O00566 681 aaKnown RBP14.93□□□□□ -0.02
PRKDC-207ENST00000536483 HOXC6P09630 235 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 CNGA1P29973 690 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 ATP2B2Q01814 1243 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 GRB14Q14449 540 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 SBK1Q52WX2 424 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 GPR153Q6NV75 609 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 EXOC6Q8TAG9 804 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 SENP6Q9GZR1 1112 aaPredicted RBP14.93□□□□□ -0.02
PRKDC-207ENST00000536483 BCL11AQ9H165 835 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 SUPT16HQ9Y5B9 1047 aaKnown RBP14.93□□□□□ -0.02
PRKDC-207ENST00000536483 DNAH12Q6ZR08 3092 aa14.93□□□□□ -0.02
PRKDC-207ENST00000536483 CYP2D6P10635 497 aa14.92□□□□□ -0.02
PRKDC-207ENST00000536483 GNAT2P19087 354 aa14.92□□□□□ -0.02
PRKDC-207ENST00000536483 CYP2C19P33261 490 aa14.92□□□□□ -0.02
PRKDC-207ENST00000536483 PDE1AP54750 535 aa14.92□□□□□ -0.02
PRKDC-207ENST00000536483 MDM2Q00987 491 aaPredicted RBP14.92□□□□□ -0.02
PRKDC-207ENST00000536483 Q7L0L9 218 aa14.92□□□□□ -0.02
PRKDC-207ENST00000536483 DEFB123Q8N688 67 aa14.92□□□□□ -0.02
PRKDC-207ENST00000536483 DDX20Q9UHI6 824 aaKnown RBP14.92□□□□□ -0.02
PRKDC-207ENST00000536483 GSG1L2A8MUP6 293 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 USP17L12C9JPN9 530 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 USP17L21D6R901 530 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 IGHDP01880 384 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 NUCB1Q02818 461 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 COG2Q14746 738 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 CTR9Q6PD62 1173 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 C16orf86Q6ZW13 317 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 SLC44A5Q8NCS7 719 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 TRPV1Q8NER1 839 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 LPAR1Q92633 364 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 CCDC17Q96LX7 622 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 MOV10L1Q9BXT6 1211 aaKnown RBP14.91□□□□□ -0.02
PRKDC-207ENST00000536483 OSBPL3Q9H4L5 887 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 HOXC10Q9NYD6 342 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
PRKDC-207ENST00000536483 SLC4A4Q9Y6R1 1079 aa14.91□□□□□ -0.02
PRKDC-207ENST00000536483 DLL1O00548 723 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 MSCO60682 206 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 ATN1P54259 1190 aaPredicted RBP14.9□□□□□ -0.02
PRKDC-207ENST00000536483 KIAA1755Q5JYT7 1200 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 ZMYM1Q5SVZ6 1142 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 DPP9Q86TI2 863 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 EVI5LQ96CN4 794 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 DYNLL2Q96FJ2 89 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 TANGO6Q9C0B7 1094 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 SPATC1LQ9H0A9 340 aa14.9□□□□□ -0.02
PRKDC-207ENST00000536483 ARPP21Q9UBL0 812 aaPredicted RBP14.9□□□□□ -0.02
PRKDC-207ENST00000536483 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
PRKDC-207ENST00000536483 PATL2C9JE40 543 aaKnown RBP14.89□□□□□ -0.03
PRKDC-207ENST00000536483 GPAA1O43292 621 aa14.89□□□□□ -0.03
PRKDC-207ENST00000536483 IGHA2P01877 340 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms